CX295728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_ACIBS (Triosephosphate isomerase OS=Acinetobacter baumannii (strain SDF) GN=tpiA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.753e-35 Identity = 90/200 (45.00%), Postives = 125/200 (62.50%), Query Frame = 3 Query: 72 VKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSN-IVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKS 659 ++ + R + VA V GA+TGE+SAE+L + I +V++GHSERR I ++ E + K+ AL+ G+ VI CVGE+LEQRE G VV Q IA V++ W N +V+AYEP+WAIGTGK A+P AQ +H ++R+ L T + I+YGGSV N ELAA PD++G LVGGASL F I+++ Sbjct: 62 LQDAARTVYTVAQDVSRVAGTGAYTGEVSAELLKDSQINFVLVGHSERRDIFGDNVEILKAKLQNALNAGMTVIYCVGESLEQREQGQAEQVVLQQICDIAPVVTAEQWQNQVVIAYEPIWAIGTGKTASPQDAQAMHAKIREGLCQLT--PAGSNIAILYGGSVKAENAVELAACPDINGALVGGASLNAASFYQIVQA 259
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_ACIBC (Triosephosphate isomerase OS=Acinetobacter baumannii (strain ACICU) GN=tpiA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.753e-35 Identity = 90/200 (45.00%), Postives = 125/200 (62.50%), Query Frame = 3 Query: 72 VKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSN-IVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKS 659 ++ + R + VA V GA+TGE+SAE+L + I +V++GHSERR I ++ E + K+ AL+ G+ VI CVGE+LEQRE G VV Q IA V++ W N +V+AYEP+WAIGTGK A+P AQ +H ++R+ L T + I+YGGSV N ELAA PD++G LVGGASL F I+++ Sbjct: 62 LQDAARTVYTVAQDVSRVAGTGAYTGEVSAELLKDSQINFVLVGHSERRDIFGDNVEILKAKLQNALNAGMTVIYCVGESLEQREQGQAEQVVLQQICDIAPVVTAEQWQNQVVIAYEPIWAIGTGKTASPQDAQAMHAKIREGLCQLT--PAGSNIAILYGGSVKAENAVELAACPDINGALVGGASLNAASFYQIVQA 259
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_DICTD (Triosephosphate isomerase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=tpiA PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.290e-35 Identity = 87/189 (46.03%), Postives = 115/189 (60.85%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKS 659 + AQN + +K GA+TGEIS ML +L+ +VI+GHSERR +E+N+ + K+ A L I CVGE E+RE G T +V+ Q K + IV+AYEPVWAIGTG A A EV +R+ + E++ RI YGGSVN N KE AQ ++DG LVGGASLKP+ F DI++S Sbjct: 61 LGAQNMFWEKEGAYTGEISPIMLKDLNCSYVIIGHSERRQYFSETNDMINKKLKSAFEYELIPIFCVGEKWEEREKGKTEEVITEQVKKGLQGLEKEKVEKIVIAYEPVWAIGTGHSAKGEDANEVAKLIRRIISEIYDEEVSQKVRIQYGGSVNPQNIKEFLAQSEIDGALVGGASLKPQSFWDIVRS 249
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_CUPTR (Triosephosphate isomerase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=tpiA PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.290e-35 Identity = 86/179 (48.04%), Postives = 109/179 (60.89%), Query Frame = 3 Query: 108 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAD--RVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 AQ+ + GAFTGE++A ML +V++GHSERR E+++ V K AL G+ + CVGETL QREAG T VV Q +A+ + V +VLAYEPVWAIGTGK AT QAQ VH LR + A + +A I+YGGSV N EL + D+DG L+GGASLK E Sbjct: 62 AQDVSAEARGAFTGEVAASMLGEFGCTYVLVGHSERRTYHGETDQAVAAKALRALEFGIVPVVCVGETLAQREAGETEAVVGRQLQAVLEALTVEQLGRVVLAYEPVWAIGTGKTATSEQAQAVHAFLRGQVAARDA-GVAGRMAILYGGSVKPDNAAELFSMTDIDGGLIGGASLKSE 239
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_CLOAB (Triosephosphate isomerase OS=Clostridium acetobutylicum GN=tpiA PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.290e-35 Identity = 86/190 (45.26%), Postives = 114/190 (60.00%), Query Frame = 3 Query: 69 LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 632 +V ++ + VAAQN ++ GAFTGEIS + L L + +VILGHSERR NE++ + KV A + + I C GETLE+REA T +V Q K +S+ + +V+AYEP+WAIGTGK AT QA E +RK + E+A RI YGGSV K A+P++DG LVGGASLK Sbjct: 49 VVNATKGSNIKVAAQNAHFEESGAFTGEISLKALEELGVSYVILGHSERRQYFNETDCALNKKVKAAFAHNITPILCCGETLEEREANVTNEVTGKQIKLDLAGLSAEQAAKVVIAYEPIWAIGTGKTATDEQANETIGAIRKTVEVMFGKEVAEKVRIQYGGSVKPNTIKAQMAKPEIDGALVGGASLK 238
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_VIBPA (Triosephosphate isomerase OS=Vibrio parahaemolyticus GN=tpiA PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.990e-35 Identity = 85/190 (44.74%), Postives = 112/190 (58.95%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 662 + AQN + GAFTG++S EML + +I+GHSERR NES+EF+ K + GL + C+GE+ Q EAG T V A Q A+ D V + + ++AYEP+WAIGTGK AT AQ +H +R L A +AA I YGGSV N + +QPD+DG LVGGASL + F I K+A Sbjct: 63 LGAQNTDLNNSGAFTGDMSPEMLKDFGATHIIIGHSERREYHNESDEFIAKKFNFLKENGLTPVFCIGESEAQNEAGETEAVCARQINAVIDTYGVEALNGAIIAYEPIWAIGTGKAATAEDAQRIHASIRA-LIAAKDEAVAAQVIIQYGGSVKPENAEAYFSQPDIDGALVGGASLDAKSFAAIAKAA 251
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_VIBFM (Triosephosphate isomerase OS=Vibrio fischeri (strain MJ11) GN=tpiA PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.990e-35 Identity = 85/190 (44.74%), Postives = 113/190 (59.47%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 662 + AQN + GAFTG++S ML +I+GHSERR NES+EFV K A+ GL + C+GE+ Q EAG T+ V A Q A+ + V + + ++AYEP+WAIGTGK AT AQ +H ++R + A S E+A I YGGSV N AQPD+DG LVGGA+L + F I K+A Sbjct: 63 LGAQNTDLNNSGAFTGDMSPAMLKEFGATHIIIGHSERREYHNESDEFVAKKFAFLKENGLTPVLCIGESEAQNEAGETVAVCARQIDAVINTQGVDALNGAIIAYEPIWAIGTGKAATAEDAQRIHAQIRAHI-AEKSEEVAKNVVIQYGGSVKPENAAAYFAQPDIDGALVGGAALDAKSFAAIAKAA 251
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_VIBF1 (Triosephosphate isomerase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=tpiA PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.990e-35 Identity = 85/190 (44.74%), Postives = 113/190 (59.47%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 662 + AQN + GAFTG++S ML +I+GHSERR NES+EFV K A+ GL + C+GE+ Q EAG T+ V A Q A+ + V + + ++AYEP+WAIGTGK AT AQ +H ++R + A S E+A I YGGSV N AQPD+DG LVGGA+L + F I K+A Sbjct: 63 LGAQNTDLNNSGAFTGDMSPAMLKEFGATHIIIGHSERREYHNESDEFVAKKFAFLKENGLTPVLCIGESEAQNEAGETVAVCARQIDAVINTQGVDALNGAIIAYEPIWAIGTGKAATAEDAQRIHAQIRAHI-AEKSEEVAKNVVIQYGGSVKPENAAAYFAQPDIDGALVGGAALDAKSFAAIAKAA 251
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_STRP8 (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M18 GN=tpiA PE=3 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 2.990e-35 Identity = 82/181 (45.30%), Postives = 112/181 (61.88%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSW--SNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 VAAQNC+ + GAFTGE S ++L + +V++GHSERR +E++E + K + GL I C GE+LE EAG + V AQ A +S+ +++VLAYEP+WAIGTGK AT AQ + +R + A+ E+A R+ YGGSV N K+ A PDVDG LVGGASL+ + Sbjct: 62 VAAQNCYFENTGAFTGETSPKVLAEMGADYVVIGHSERRDYFHETDEDINKKAKAIFANGLTPIICCGESLETYEAGKAAEFVGAQVSAALAGLSAEQVASLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLEAD 242
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_PARUW (Triosephosphate isomerase OS=Protochlamydia amoebophila (strain UWE25) GN=tpiA PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.990e-35 Identity = 82/187 (43.85%), Postives = 113/187 (60.43%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDII 653 + AQN GAFTGEI+ +M+ +V+LGHSERR + E N F+ KV AL GL + CVGET E+R++G T ++ Q + +++ +++AYEPVWAIG G+ A P AQE+H RK + S E+A I YGGSVN +N L QPD+DG L+GGASL E F++I+ Sbjct: 64 IGAQNMNDASEGAFTGEIAGKMVKEAGASFVLLGHSERRHLYKEDNAFINRKVKKALEIGLTPVLCVGETFEERKSGETQQIIRTQIQECLAGLTAEDLKTLIIAYEPVWAIGNGQNAKPEGAQEIHQFCRKIIKEIFSEELAEQIVIQYGGSVNPSNAISLLKQPDIDGLLIGGASLSLETFVEIV 250 The following BLAST results are available for this feature:
BLAST of CX295728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295728 ID=CX295728; Name=CX295728; organism=Citrus clementina; type=EST; length=720bpback to top |