CX295728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_FINM2 (Triosephosphate isomerase OS=Finegoldia magna (strain ATCC 29328) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.101e-35 Identity = 81/180 (45.00%), Postives = 113/180 (62.78%), Query Frame = 3 Query: 108 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS---WSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 AQN + ++ GAFTGE+S ML +L I +VI+GHSERR I E +E + K+A AL +K I C GE LEQRE+ +VV +Q + ++ S +V+AYEP+WAIGTGK A+ AQ + +R L S ++A + RI YGGSV N ++ ++ D+DG LVGGASL+ E Sbjct: 62 AQNMYYEECGAFTGEVSPNMLKDLGIDYVIIGHSERRTIFKEDDELLNKKIASALKHDIKPILCCGENLEQRESNRHEEVVESQIRLDLKGINEKDIMSKLVIAYEPIWAIGTGKTASSDDAQSMCKFIRNLLSKMYSKDLADSVRIQYGGSVKPENILDIMSKEDIDGALVGGASLEAE 241
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_CHLCV (Triosephosphate isomerase OS=Chlamydophila caviae GN=tpiA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.101e-35 Identity = 82/190 (43.16%), Postives = 114/190 (60.00%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAEL 668 + AQN GAFTGE+S ML + +V+LGHSE R I +E + + KV A G+ + C+GETLE RE G+T +V++ Q ++ + +++AYEPVWAIGTGKVA+ QEVH R+ L S E + I+YGGSV N + A PDVDG LVGGASL P+ F +++++ L Sbjct: 65 LGAQNVHQDSSGAFTGEVSLPMLQEFHVNFVLLGHSECRHIFHEEDATIALKVGAAARSGVVPVLCIGETLEARENGTTKEVLSNQLMLGLAQLPETAPVIIAYEPVWAIGTGKVASTADVQEVHAFCREVLSRIFSKEKSEIISILYGGSVKADNAEGFARCPDVDGLLVGGASLDPQGFANVLRNFNL 254
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS1_LISMF (Triosephosphate isomerase 1 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=tpiA1 PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.101e-35 Identity = 86/202 (42.57%), Postives = 120/202 (59.41%), Query Frame = 3 Query: 69 LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNI--VLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIKSAE 665 LV+ + + VAAQNC+ + GAFTGEIS L +L + +VI+GHSERR +E++E + K G+ I C GETL+QREAG T V Q +A ++ I V+AYEP+WAIGTGK +T A E +R + S + A A RI YGGSV N + A+ D+DG LVGGASL+P F+ ++++ + Sbjct: 50 LVRLTEGTNLRVAAQNCYFEDEGAFTGEISPFALADLGVSYVIIGHSERREYFHETDEDINKKAHAIFKHGMTPIICCGETLDQREAGQTDTWVRGQIRAALAGLTEEQVIKSVIAYEPIWAIGTGKSSTSADANETCAVIRAEVADAVSQKAADAVRIQYGGSVKPENIADYLAESDIDGALVGGASLEPASFLALLEAVK 251
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS1_LISIN (Triosephosphate isomerase 1 OS=Listeria innocua GN=tpiA1 PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.101e-35 Identity = 86/202 (42.57%), Postives = 120/202 (59.41%), Query Frame = 3 Query: 69 LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNI--VLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIKSAE 665 LV+ + + VAAQNC+ + GAFTGEIS L +L + +VI+GHSERR +E++E + K G+ I C GETL+QREAG T V Q +A ++ I V+AYEP+WAIGTGK +T A E +R + S + A A RI YGGSV N + A+ D+DG LVGGASL+P F+ ++++ + Sbjct: 50 LVRLTEGTNLRVAAQNCYFEDEGAFTGEISPFALADLGVSYVIIGHSERREYFHETDEDINKKAHAIFKHGMTPIICCGETLDQREAGQTDTWVRGQIRAALAGLTEEQVIKSVIAYEPIWAIGTGKSSTSADANETCAVIRAEVADAVSQKAADAVRIQYGGSVKPENIADYLAESDIDGALVGGASLEPASFLALLEAVK 251
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_BACSK (Triosephosphate isomerase OS=Bacillus clausii (strain KSM-K16) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.662e-35 Identity = 87/194 (44.85%), Postives = 117/194 (60.31%), Query Frame = 3 Query: 93 DFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 665 + + AQ + GAFTGEIS + L ++ + +VI+GHSERR + E++E V KV A + L I C GET E+REAG VV Q + +S V+AYEP+WAIGTGK AT A E +R+ + AN S E A A RI YGGSV N K+ AQPD+DG LVGGASL + F++++ +A+ Sbjct: 58 ELKIGAQTMHFEDNGAFTGEISPKALSDMGVHYVIIGHSERREMFAETDETVNKKVHAAFAHHLVPIMCCGETAEEREAGKMEAVVKEQVENGLAGLSEEQVKQTVIAYEPIWAIGTGKSATEKDANEACAYVRQTVAANFSEEAAEAIRIQYGGSVKPGNIKDYMAQPDIDGALVGGASLDADSFLELVGAAK 251
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_RHOP5 (Triosephosphate isomerase OS=Rhodopseudomonas palustris (strain BisA53) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.701e-35 Identity = 85/179 (47.49%), Postives = 106/179 (59.22%), Query Frame = 3 Query: 96 FHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 632 F V AQ+C GA TG++SAEMLV+ +I+GHSERR E++ V K A G I CVGET +R+AG T+DVV Q ++ N V+AYEPVWAIGTG T ++VH +R L E AA RI+YGGSV +N KEL A P+V+G LVGGASLK Sbjct: 64 FAVGAQDCHANVSGAHTGDLSAEMLVDAGASAIIVGHSERRADHGETDSVVRAKAEAAWRAGAVAIVCVGETQAERDAGQTLDVVGRQLAGSLPDGATAENTVVAYEPVWAIGTGLTPTANDVEQVHKFIRDCLTKRFGGE-GAAVRILYGGSVKPSNAKELMAVPEVNGALVGGASLK 241
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_MYCBP (Triosephosphate isomerase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.701e-35 Identity = 84/182 (46.15%), Postives = 110/182 (60.44%), Query Frame = 3 Query: 108 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 AQ+ GA+TG++S L L +V++GHSERR NE + V K A AL GL I C+GE L+ REAG+ + Q + +A+++ S +V AYEPVWAIGTG+VA+ AQEV +RK L + SP IA R++YGGSVN N ++ AQ DVDG LVGGASL E Sbjct: 68 AQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGS---VVTAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDVDGGLVGGASLDGE 246
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_ACIF2 (Triosephosphate isomerase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.701e-35 Identity = 87/189 (46.03%), Postives = 119/189 (62.96%), Query Frame = 3 Query: 111 QNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV---SSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIKSAE 665 QN + + GA+TGEIS ML ++ +V++GHSERR I ES+ + K+ AL GL + CVGET +R G T V+ Q +A+ + +S N+++AYEPVWAIGTG A+P QAQ VH +R+ L A S ++A ++YGGSV G N L Q D+DG LVGGASL+ EFI I ++AE Sbjct: 64 QNLFWEASGAYTGEISGAMLRDMGCRYVLIGHSERRQIFAESDAQIVQKIKAALLSGLIPVVCVGETEAERAQGLTDAVLRRQLEAVLPLLNLEASQPNLIIAYEPVWAIGTGLSASPEQAQAVHVFIRE-LAAAYSAQLARRLLLLYGGSVKGNNAAALFDQADIDGALVGGASLQAGEFIQICRAAE 251
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_RALSO (Triosephosphate isomerase OS=Ralstonia solanacearum GN=tpiA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.136e-34 Identity = 88/179 (49.16%), Postives = 108/179 (60.34%), Query Frame = 3 Query: 108 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 AQ+ + GAFTGE++A ML + I+GHSERR E++ V K AL G+ I CVGETL QREAG T VVA Q +A+ + +S +IV+AYEPVWAIGTGK AT QAQ VH LR + A +A I+YGGSV N EL D+DG L+GGASLK E Sbjct: 63 AQDVSAETRGAFTGEVAASMLSEFGCGYAIVGHSERRTYHGETDAQVAIKALRALEHGITPIVCVGETLAQREAGETELVVARQLEAVLESLSVEQLGHIVVAYEPVWAIGTGKTATSEQAQAVHAFLRGRV-AACDAGVAQRMPILYGGSVKPDNAAELFTMADIDGGLIGGASLKAE 240
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_NATTJ (Triosephosphate isomerase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=tpiA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.136e-34 Identity = 82/179 (45.81%), Postives = 111/179 (62.01%), Query Frame = 3 Query: 108 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 AQN + ++ GAFTGE+S +ML L + +VI+GHSERR I ES+E V KV AL G+K I CVGE+ QR G T++VV Q K+ V S N+V AYEPVWAIG+GK AT A++V +R + + + +A ++YGGSV N +E Q +++G LVGG SL E Sbjct: 62 AQNVYFEESGAFTGEVSPKMLAELGVEYVIIGHSERRNIFAESDEEVNKKVRIALKYGIKPIICVGESDAQRNEGKTLEVVENQVKSALSEVVSDTLQNVVFAYEPVWAIGSGKAATGEDAEQVCKHIRS-VISELNSSVADDIPVLYGGSVKPENLEEFMDQDNINGALVGGKSLVAE 239 The following BLAST results are available for this feature:
BLAST of CX295728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295728 ID=CX295728; Name=CX295728; organism=Citrus clementina; type=EST; length=720bpback to top |