CX295728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_CLOK5 (Triosephosphate isomerase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.938e-34 Identity = 86/192 (44.79%), Postives = 111/192 (57.81%), Query Frame = 3 Query: 69 LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTK-AIAD-RVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 +VKS + V AQN ++ GA+TGEIS ML +L + +VI+GHSERR NE +E + K+ A + I C GE+L +RE G T +V+ Q K A+ D R IV+AYEP+WAIGTGK AT QA + +R + A RI YGGSV A K QP +DG LVGGASLKP+ Sbjct: 49 VVKSVGGTNIKVGAQNMHYEESGAYTGEISPGMLKSLKVDYVIIGHSERRQYFNEKDETINKKIKKAFEHDIIPIVCCGESLLERENGITEEVLGRQIKLALKDLRKEQVEKIVIAYEPIWAIGTGKTATDKQANDTIAHIRGVVSKMYGENAAEVVRIQYGGSVKPATIKAQMEQPHIDGALVGGASLKPQ 240
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_ANOFW (Triosephosphate isomerase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.938e-34 Identity = 84/202 (41.58%), Postives = 121/202 (59.90%), Query Frame = 3 Query: 69 LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 665 LV+++ + + AQN + GAFTGEIS L +L + +VI+GHSERR + E++E V KV A GL I C GETLE+RE+ T +VV Q + + ++ +V+AYEP+WAIGTGK +T A V +R+ + S E A A RI YGGSV N A+ +DG LVGGASL+P+ F+ ++++ + Sbjct: 50 LVEATKGTNVKIGAQNMHFEDQGAFTGEISPVALKDLGVEYVIIGHSERREMFAETDETVNKKVLAAFKHGLVPIVCCGETLEERESNRTNEVVRVQVEKALEGLTEEQVKQVVIAYEPIWAIGTGKSSTAEDANNVCGYIRQVIANKFSQEAANAVRIQYGGSVKPENIAAFLAEEHIDGALVGGASLQPQSFLQLVEAGK 251
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_XANP2 (Triosephosphate isomerase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.532e-34 Identity = 88/187 (47.06%), Postives = 109/187 (58.29%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKS 659 + QNC GA TG ISAEML + + VI+GHSERR L+ES+ V KV A GL I CVGET E+R+AG + VV Q + SN+V+AYEPVWAIGTG+ TP +H +R L + E A RI+YGGSV N L A DVDG LVGGASLK +F+ I ++ Sbjct: 65 LGGQNCHPAPAGAHTGGISAEMLKDAGVTSVIVGHSERRTNLSESDAVVMAKVKAAWCFGLLPIVCVGETAEERDAGEAVGVVTRQVHQSLPEGCTASNLVIAYEPVWAIGTGRTPTPEDVANIHGTIRSVLRSQFGAE-ADGIRILYGGSVKPDNAATLMAVADVDGALVGGASLKAADFLAIARA 250
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_RHOSR (Triosephosphate isomerase OS=Rhodococcus sp. (strain RHA1) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.532e-34 Identity = 81/179 (45.25%), Postives = 107/179 (59.78%), Query Frame = 3 Query: 108 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSW--SNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 AQ+ GA+TGEIS ML L +V++GHSERR + E N+ V K AL G+ I C+GE L+ REAG + Q + +S + +V+AYEPVWAIGTG+VA+ AQEV +R L S ++A+ R++YGGSVN N E+ Q DVDG LVGGASLK + Sbjct: 68 AQDVSAHDSGAYTGEISGSMLAKLGCTFVVVGHSERRTLHCEDNDTVLAKTKAALKNGITPIVCIGEGLDVREAGEHVSYNVEQLRGSLAGLSGEDIAKVVIAYEPVWAIGTGRVASAANAQEVCAAIRATLGELASQDVASGVRVLYGGSVNAKNVGEIVGQTDVDGALVGGASLKAD 246
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_CLOB8 (Triosephosphate isomerase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.532e-34 Identity = 86/180 (47.78%), Postives = 107/180 (59.44%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-IADRVSSW-SNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP 635 VAAQN ++ GAFTGE++ ML + I +V+LGHSERR NE++E + KV A + I C GE+LEQRE G+T V+ AQ KA IA + +V+AYEP+WAIGTGK AT QA E +R + E A TRI YGGSV K D+DG LVGGASL P Sbjct: 60 VAAQNMHFEESGAFTGEVAPGMLEAMGIDYVVLGHSERREYFNETDEALNKKVKKAFEHNITPILCCGESLEQRENGTTNKVIEAQIKADIAGLTNEQVEKLVIAYEPIWAIGTGKTATDEQANETIKAIRAMVAEMYGSESAEKTRIQYGGSVKPNTIKAQMEMSDIDGALVGGASLVP 239
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_BRASB (Triosephosphate isomerase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.532e-34 Identity = 83/186 (44.62%), Postives = 111/186 (59.68%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIK 656 V AQ+C K GA TG++SAEML + +I+GHSERR ES+ V K GL I CVGET +QR+AG T+D++ Q + S+ +N+ +AYEPVWAIGTG T +++H +R L + E A RI+YGGSV +N EL A +V+G LVGGASLK +F+ I K Sbjct: 65 VGAQDCHAKASGAHTGDLSAEMLADAGASAIIVGHSERRADHGESDVVVHQKTEAVWRAGLVAIVCVGETQQQRDAGQTLDILRGQLNLSLPQGSTAANLTVAYEPVWAIGTGLTPTAKDVEQIHAFIRTLLIERFNGE-GARMRILYGGSVKPSNAAELMAVANVNGALVGGASLKAADFLAIAK 249
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_BORDL (Triosephosphate isomerase OS=Borrelia duttonii (strain Ly) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.532e-34 Identity = 89/188 (47.34%), Postives = 113/188 (60.11%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLK-VIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDII 653 + AQN + GA T EI+ ML+ + +VILGHSE R L E++E + KV L K +I CVGETLE+RE G T+DVV Q + V S I+LAYEPVWAIGTGK AT +AQEVH +R + + S A I YGGSVN N + L + D+DG L+GGASLK + F+ II Sbjct: 62 LGAQNMSYENSGARTSEIAPSMLLEFGVDYVILGHSECRTYLGENDEIINKKVLTGLKHPFKYLILCVGETLEEREKGKTLDVVLNQVRNGLASVYESDLQRIILAYEPVWAIGTGKTATKEEAQEVHKAIRLEIQSLYSKSAADNIIIQYGGSVNVDNVEGLMGENDIDGALIGGASLKADSFLKII 249
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS1_RHILO (Triosephosphate isomerase 1 OS=Rhizobium loti GN=tpiA1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.532e-34 Identity = 86/192 (44.79%), Postives = 112/192 (58.33%), Query Frame = 3 Query: 87 RPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKS 659 R H ++C K+ GA+TG ISAEML + VI+GHSE R E + V K A A GL I C+GET +QREAG+T++V++ Q ++ SN V+AYEPVWAIGTG T E H +R+ L AA TRI+YGGSV +N EL +VDG LVGGASLK +F+ I ++ Sbjct: 60 RTPVHAGGEDCHTKESGAYTGCISAEMLKDAGASHVIVGHSECREQRGEDDATVQAKAAAAWRAGLVAIICIGETQQQREAGATLEVLSRQVAGSVPPSATPSNTVIAYEPVWAIGTGLTPTAADVAEAHAHIRERLSEKLGAS-AAKTRILYGGSVKPSNAVELLGVRNVDGALVGGASLKAADFLGIAEA 250
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_POLSQ (Triosephosphate isomerase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.306e-34 Identity = 80/191 (41.88%), Postives = 115/191 (60.21%), Query Frame = 3 Query: 69 LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 L+K + AQ+ GA+TGE+ A ML + +VI+GHSERR + E++E V K AL G+ + CVGET ++R +G ++V +Q K ++ ++ ++AYEPVWAIGTGKVA+ AQ++H +R L A ++A+ I+YGGSV N EL A PD+DG LVGGASL P+ Sbjct: 55 LIKEHSLAFLSLGAQDVSAHGAGAYTGEVGASMLKEMGCEYVIVGHSERRQMHQEADESVAAKALQALDSGMTPVICVGETADERNSGRAEEIVCSQVAKQVSVLQDRLADCLIAYEPVWAIGTGKVASAQVAQDMHRAIRMQL-AEFDEDVASHVGILYGGSVKPDNAVELFAMPDIDGGLVGGASLNPQ 244
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_MYCVP (Triosephosphate isomerase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.306e-34 Identity = 83/186 (44.62%), Postives = 108/186 (58.06%), Query Frame = 3 Query: 108 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 659 AQ+ GA+TGEIS L L + ++GHSERR NE + V K A A GL I C+GE L+ REAG+ ++ Q + +S+ V+AYEPVWAIGTG+VA+ AQEV +R L SPE+AA R++YGGSVN N E+ Q DVDG LVGGASL E ++ + Sbjct: 68 AQDVSQHDSGAYTGEISGAFLAKLGCTFAVVGHSERRTYHNEDDALVAAKAAAAFKHGLTPIICIGEHLDVREAGNHVEYNVNQLRGSLAGLSAEQIGQAVIAYEPVWAIGTGRVASAADAQEVCKAIRDELGNLASPELAAGVRVLYGGSVNAKNVGEIVGQADVDGALVGGASLDGEQFSMLSA 253 The following BLAST results are available for this feature:
BLAST of CX295728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295728 ID=CX295728; Name=CX295728; organism=Citrus clementina; type=EST; length=720bpback to top |