CX295728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_HYPNA (Triosephosphate isomerase OS=Hyphomonas neptunium (strain ATCC 15444) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.306e-34 Identity = 80/188 (42.55%), Postives = 113/188 (60.11%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 662 + + C + GA TG+++AEML + +VI+GHSERR E++ V + + AL G+ I CVGETL+QR+AG + V+ Q + + IV+AYEPVWAIGTG+VAT Q EVH +R L + TRI+YGGS+N N E+ A +V+G L+GGASLK +F+ I + A Sbjct: 61 IGGETCHANEKGAHTGDLAAEMLKDAGASYVIVGHSERRADHGETDAVVAAQASAALRAGITPIICVGETLDQRDAGEVLTVITTQMAESIPEGAEAAAIVIAYEPVWAIGTGRVATSEQIAEVHTSIRN-LLVRRFGDAGRTTRILYGGSMNPGNAAEILAVAEVNGGLIGGASLKAADFLAIYRLA 247
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_BRASO (Triosephosphate isomerase OS=Bradyrhizobium sp. (strain ORS278) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.306e-34 Identity = 85/186 (45.70%), Postives = 110/186 (59.14%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIK 656 V AQ+C K GA TG+ISAEML + VI+GHSERR ES+ V K A GL I CVGET +QR+AG T++++ Q S N+++AYEPVWAIGTG T +++H +R+ L E A RI+YGGSV +N EL A +V+G LVGGASLK +F+ I K Sbjct: 65 VGAQDCHAKASGAHTGDISAEMLADAGASAVIVGHSERRADHGESDVVVHQKAEAAWRAGLVAIVCVGETQQQRDAGLTLEILRGQLTLSLPEGSRADNLIVAYEPVWAIGTGLTPTAGDVEQIHSFIRQLLIVRFK-EQGARMRILYGGSVKPSNAAELMAVANVNGALVGGASLKAADFLAIAK 249
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_TREPS (Triosephosphate isomerase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.318e-34 Identity = 85/189 (44.97%), Postives = 115/189 (60.85%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-IADRVSS-WSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKS 659 + AQ+ ++ GA TGE+S L +L + VI+GHSERR E+++ + KV L GL+VI CVGE L++ EAG T +VV Q +A +AD S N+ +AYEPVWAIGTGK ATP QA VH +R + IA A I YGGS+ N + L A+ +DG L+GGASL+ F+ I +S Sbjct: 60 LGAQDVSSEEWGAHTGEVSVLQLEDLGVQVVIVGHSERRHGRGENDKLINQKVRRVLESGLRVILCVGERLQEYEAGCTNEVVGTQVRAGMADVCGSLMHNVTVAYEPVWAIGTGKTATPAQANAVHAHIRSVVREMYGAAIAEALCIQYGGSMKAENARALLAEEHIDGGLIGGASLEAASFVPIARS 248
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_TREPA (Triosephosphate isomerase OS=Treponema pallidum GN=tpiA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.318e-34 Identity = 85/189 (44.97%), Postives = 115/189 (60.85%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-IADRVSS-WSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKS 659 + AQ+ ++ GA TGE+S L +L + VI+GHSERR E+++ + KV L GL+VI CVGE L++ EAG T +VV Q +A +AD S N+ +AYEPVWAIGTGK ATP QA VH +R + IA A I YGGS+ N + L A+ +DG L+GGASL+ F+ I +S Sbjct: 60 LGAQDVSSEEWGAHTGEVSVLQLEDLGVQVVIVGHSERRHGRGENDKLINQKVRRVLESGLRVILCVGERLQEYEAGCTNEVVGTQVRAGMADVCGSLMHNVTVAYEPVWAIGTGKTATPAQANAVHAHIRSVVREMYGAAIAEALCIQYGGSMKAENARALLAEEHIDGGLIGGASLEAASFVPIARS 248
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SYNJA (Triosephosphate isomerase OS=Synechococcus sp. (strain JA-3-3Ab) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.318e-34 Identity = 86/185 (46.49%), Postives = 109/185 (58.92%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDII 653 V AQN + GAFTGEIS ML L + +VI+GHSERR E++E V ++A A GL I CVGE+L+QRE G T + Q + N+V+AYEP+WAIGTGK +A V +R+ L A+ P I+YGGSV +N EL AQP +DG LVGGASL P EF I+ Sbjct: 66 VGAQNLHWEDQGAFTGEISGPMLAELGVRYVIVGHSERRQYFGETDETVNRRLAAAQRHGLTPILCVGESLQQREQGLTESWIVGQLDRALPGI-DLRNLVIAYEPIWAIGTGKTCAAAEANRVIGLIRQHLGADHLP-------ILYGGSVKASNIDELMAQPQIDGVLVGGASLDPQEFARIV 242
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_FRATM (Triosephosphate isomerase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.318e-34 Identity = 83/200 (41.50%), Postives = 120/200 (60.00%), Query Frame = 3 Query: 72 VKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIKSA 662 V S L V QN GA+TGEISA ML ++ ++++GHSERR + ES+E V K+ + + + C+GE+L+ R++G V+A Q I + +S + +V+AYEPVWAIGTG VA+ Q QE H +R L A ++A +I+YGGS+ N K++ + P+VDG L+GGASLK EF +II A Sbjct: 49 VISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRQSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETHQFIRS-LLAKVDEKLAKNIKIVYGGSLKAENAKDILSLPNVDGGLIGGASLKAVEFNEIINQA 247
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_CLOTE (Triosephosphate isomerase OS=Clostridium tetani GN=tpiA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.318e-34 Identity = 81/179 (45.25%), Postives = 111/179 (62.01%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTK--AIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 632 V AQN + ++ GAFTGE+S ML L+I +VI+GHSERR E+++ V K+ A L I CVGETL+++E G T +VV+ Q K + +V+AYEP+WAIGTGK AT +A EV +R + + ++A + RI YGGSV + KE + D+DG LVGGASLK Sbjct: 66 VGAQNMYFEEKGAFTGEVSPLMLEKLNIDYVIIGHSERRQYFKETDQTVNKKLKAAFEHNLIPILCVGETLDEKENGVTEEVVSKQVKLGLFELKEEQVEKLVIAYEPIWAIGTGKTATSEEANEVIALIRSTVKSLYGDKVAESLRIQYGGSVKPSTIKEQMSMSDIDGALVGGASLK 244
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_CLOBM (Triosephosphate isomerase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.318e-34 Identity = 83/181 (45.86%), Postives = 107/181 (59.12%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 V AQN ++ GA+TGEIS +ML L + +VI+GHSERR NE++E V KV A L I C GE+LEQRE T V+ Q K +S +V+AYEP+WAIGTGK AT QA E +R + + ++A+ RI YGGSV K A+ ++DG LVGGASLK E Sbjct: 60 VGAQNMHFEESGAYTGEISPKMLEELGVHYVIIGHSERRQYFNETDETVNKKVKKAFEHNLIPIVCCGESLEQREGNVTEKVLEGQIKVDLKELSKEQVEKLVIAYEPIWAIGTGKTATDEQANETIGYIRTVVKSMYGEDVASKVRIQYGGSVKPGTIKAQMAKEEIDGALVGGASLKAE 240
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_VIBCH (Triosephosphate isomerase OS=Vibrio cholerae GN=tpiA PE=3 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 5.640e-34 Identity = 85/190 (44.74%), Postives = 108/190 (56.84%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 662 + AQN GA+TG++S ML + +I+GHSERR ES+EFV K A+ GL + C+GET Q EAG T V A Q A+ D V + + ++AYEP+WAIGTGK AT AQ +H +R L A +A I YGGSV N AQPD+DG LVGGASL + F I K+A Sbjct: 63 LGAQNTDTHNSGAYTGDMSPAMLKDFGASHIIIGHSERRDYHKESDEFVAKKFAFLKENGLTPVFCIGETEAQNEAGETEAVCARQINAVIDAYGVEALNGAIIAYEPIWAIGTGKAATADDAQRIHASIRA-LIAAKDAAVAEQVIIQYGGSVKPENAASYFAQPDIDGALVGGASLDAKGFAAIAKAA 251
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_BORRA (Triosephosphate isomerase OS=Borrelia recurrentis (strain A1) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.640e-34 Identity = 88/188 (46.81%), Postives = 113/188 (60.11%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLK-VIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDII 653 + AQN + GA T EI+ ML+ + +VILGHSE R L E++E + KV L K +I CVGETLE+RE G T+DVV Q + V S I+LAYEPVWAIGTGK AT +AQEVH +R + + S A I YGGSVN N + L + D+DG L+GG+SLK + F+ II Sbjct: 62 LGAQNMSYENSGARTSEIAPSMLLEFGVDYVILGHSECRTYLGENDEIINKKVLTGLKHPFKYLILCVGETLEEREKGKTLDVVLNQVRNGLASVYESDLQRIILAYEPVWAIGTGKTATKEEAQEVHKAIRLEIQSLYSKSAADNIIIQYGGSVNVDNVEGLMGENDIDGALIGGSSLKADSFLKII 249 The following BLAST results are available for this feature:
BLAST of CX295728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295728 ID=CX295728; Name=CX295728; organism=Citrus clementina; type=EST; length=720bpback to top |