CX295728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS3_RHIEC (Triosephosphate isomerase (Fragment) OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.640e-34 Identity = 81/161 (50.31%), Postives = 106/161 (65.84%), Query Frame = 3 Query: 135 GAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFL 611 GA+TGE+SAE+L + I +V++GHSERR ES + K AL+ GLKVI CVGE+LEQRE+G VV Q +A V++ W +IV+AYEP+WAIGTGK A+P AQ +H ++R+ L TS A I+YGGSV N ELAA PD++G L Sbjct: 68 GAYTGEVSAELLKDSQIEYVLIGHSERREYFAESAAILNAKAQNALNAGLKVIYCVGESLEQRESGQAEVVVLQQICDLASVVTAEQWPHIVIAYEPIWAIGTGKTASPEDAQTMHAKIREGLTQITSH--GANMAILYGGSVKAENAVELAACPDINGAL 226
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_VIBMA (Triosephosphate isomerase OS=Vibrio marinus GN=tpiA PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.366e-34 Identity = 84/190 (44.21%), Postives = 110/190 (57.89%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 662 + AQN + GAFTG++S ML +I+GHSERR ES+EFV K A+ GL + C+GE+ Q EAG TM V A Q A+ + V + ++AYEP+WAIGTGK AT AQ +H ++R + A S +A I YGGSV N AQPD+DG LVGGA+L + F I K+A Sbjct: 63 LGAQNTDLNNSGAFTGDMSPAMLKEFGATHIIIGHSERREYHAESDEFVAKKFAFLKENGLTPVLCIGESDAQNEAGETMAVCARQLDAVINTQGVEALEGAIIAYEPIWAIGTGKAATAEDAQRIHAQIRAHI-AEKSEAVAKNVVIQYGGSVKPENAAAYFAQPDIDGALVGGAALDAKSFAAIAKAA 251
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_THET8 (Triosephosphate isomerase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=tpiA PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.366e-34 Identity = 83/188 (44.15%), Postives = 112/188 (59.57%), Query Frame = 3 Query: 108 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 662 AQ+ K GA+TGE+SA ML +L + I+GHSERR E++ V +K L +G+ I CVGE LE RE G + Q + + V +V+AYEPVWAIGTGK ATP A+ +H +RK L A+ RI+YGGSVN N +L + P+VDG LVGGASL+ E F+ +++ A Sbjct: 62 AQDVSAHKEGAYTGEVSARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGPEALVIAYEPVWAIGTGKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNPKNFADLLSMPNVDGGLVGGASLELESFLALLRIA 249
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SILST (Triosephosphate isomerase OS=Silicibacter sp. (strain TM1040) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.366e-34 Identity = 87/184 (47.28%), Postives = 113/184 (61.41%), Query Frame = 3 Query: 93 DFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTK-AIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATR---IIYGGSVNGANCKELAAQPDVDGFLVGGASLK 632 D + Q+C K GA TG++SA+ML + +VI+GHSERR E + V K A + GL + C+GETLE+REAG+T++VV AQ ++ D V++ N V+AYEPVWAIGTGKV T Q EVH LR L A AA + ++YGGSV N E+ +VDG LVGGASLK Sbjct: 54 DIAIGGQDCHAKTSGAHTGDLSADMLRDAGATYVIIGHSERRADHGEGDADVRAKTEAAQAAGLVAVVCIGETLEEREAGTTLEVVGAQLAGSLPDGVTA-ENTVVAYEPVWAIGTGKVPTLDQIAEVHDALRADLVA----RFGAAGKDLPLLYGGSVKPGNAAEIFGVSNVDGALVGGASLK 232
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_STRTD (Triosephosphate isomerase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=tpiA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.620e-34 Identity = 81/191 (42.41%), Postives = 115/191 (60.21%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 656 VAAQN + + GAFTGE S ++L + +V++GHSERR +E++E + K + G+ I C GE+LE EAG + V AQ A ++ ++ V+AYEP+WAIGTGK A+ AQ++ +R + A+ E+A R++YGGSV N E A PDVDG LVGGASL+PE +D +K Sbjct: 62 VAAQNTYFENSGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMIPIICCGESLETYEAGKAAEFVGAQVSAALAGLTPEQVASSVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVLYGGSVKPENVAEYMACPDVDGALVGGASLEPESFLALLDFVK 252
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_STRT2 (Triosephosphate isomerase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=tpiA PE=3 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 9.620e-34 Identity = 81/191 (42.41%), Postives = 115/191 (60.21%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 656 VAAQN + + GAFTGE S ++L + +V++GHSERR +E++E + K + G+ I C GE+LE EAG + V AQ A ++ ++ V+AYEP+WAIGTGK A+ AQ++ +R + A+ E+A R++YGGSV N E A PDVDG LVGGASL+PE +D +K Sbjct: 62 VAAQNTYFENSGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMIPIICCGESLETYEAGKAAEFVGAQVSAALAGLTPEQVASSVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVLYGGSVKPENVAEYMACPDVDGALVGGASLEPESFLALLDFVK 252
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_STRT1 (Triosephosphate isomerase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=tpiA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.620e-34 Identity = 81/191 (42.41%), Postives = 115/191 (60.21%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 656 VAAQN + + GAFTGE S ++L + +V++GHSERR +E++E + K + G+ I C GE+LE EAG + V AQ A ++ ++ V+AYEP+WAIGTGK A+ AQ++ +R + A+ E+A R++YGGSV N E A PDVDG LVGGASL+PE +D +K Sbjct: 62 VAAQNTYFENSGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMIPIICCGESLETYEAGKAAEFVGAQVSAALAGLTPEQVASSVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVLYGGSVKPENVAEYMACPDVDGALVGGASLEPESFLALLDFVK 252
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_MYCPA (Triosephosphate isomerase OS=Mycobacterium paratuberculosis GN=tpiA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.620e-34 Identity = 84/179 (46.93%), Postives = 108/179 (60.34%), Query Frame = 3 Query: 108 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 AQ+ GA+TG+IS L L +V++GHSERR NE + V K A AL L I C+GE LE REAG+ + Q + +S+ +V+AYEPVWAIGTG+VA+ AQEV +RK L + S +IA + R++YGGSVN N EL AQ D+DG LVGGASL E Sbjct: 68 AQDLSQHDSGAYTGDISGAFLAKLGCTFVVVGHSERRTYHNEDDALVAAKAATALKHELTPIICIGEHLEVREAGNHVIHCEEQLRGSLAGLSAEQIGKVVIAYEPVWAIGTGRVASASDAQEVCAAIRKELASLASAQIADSVRVLYGGSVNAKNVGELIAQDDIDGGLVGGASLDGE 246
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_MYCA1 (Triosephosphate isomerase OS=Mycobacterium avium (strain 104) GN=tpiA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.620e-34 Identity = 84/179 (46.93%), Postives = 108/179 (60.34%), Query Frame = 3 Query: 108 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 AQ+ GA+TG+IS L L +V++GHSERR NE + V K A AL L I C+GE LE REAG+ + Q + +S+ +V+AYEPVWAIGTG+VA+ AQEV +RK L + S +IA + R++YGGSVN N EL AQ D+DG LVGGASL E Sbjct: 68 AQDLSQHDSGAYTGDISGAFLAKLGCTFVVVGHSERRTYHNEDDALVAAKAAAALKHELTPIICIGEHLEVREAGNHVIHCEEQLRGSLAGLSAEQIGKVVIAYEPVWAIGTGRVASASDAQEVCAAIRKELASLASAQIADSVRVLYGGSVNAKNVGELIAQDDIDGGLVGGASLDGE 246
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_FRAP2 (Triosephosphate isomerase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=tpiA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.620e-34 Identity = 80/200 (40.00%), Postives = 119/200 (59.50%), Query Frame = 3 Query: 72 VKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 662 V + L + V QN GA+TGE+SAEML ++ ++++GHSERR + E+++ V K+ + + + C+GE+LE R+ G V+ Q I + +S + +++AYEPVWAIGTG VA+ Q QE H +R L A +A +I+YGGS+ N K++ + PDVDG L+GGASLK EF +II A Sbjct: 49 VLAQLPKEIGVGLQNITFYDNGAYTGELSAEMLHDVGCNYLLIGHSERRSLFGETDQDVFKKLNKIIDTSVVPVVCIGESLEDRQGGRLEKVLTTQLSLILENLSIEQLARVIIAYEPVWAIGTGVVASLEQVQETHQFIRS-LVAKVDENLAKNMKIVYGGSLKAENAKDILSLPDVDGGLIGGASLKASEFNEIINQA 247 The following BLAST results are available for this feature:
BLAST of CX295728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295728 ID=CX295728; Name=CX295728; organism=Citrus clementina; type=EST; length=720bpback to top |