CX295728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_DEHSC (Triosephosphate isomerase OS=Dehalococcoides sp. (strain CBDB1) GN=tpiA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.143e-33 Identity = 84/188 (44.68%), Postives = 112/188 (59.57%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 662 + AQN + ++ GA+TGEIS ML L +VI+GHSERR E+ + V K+ AL GL I CVGE E+ E G T V+ Q K D ++ S I++AYEP+WAIGTGK AT +A +R+ L A + I+YGGSVN N E+ +Q ++DG LVGGASLK E F+ I + A Sbjct: 61 LGAQNLFYQEKGAYTGEISPLMLKEL-CQYVIIGHSERRAYFGETGQVVNQKIKAALQAGLLPIVCVGEKPEENENGQTRQVLETQLKEALDGLNL-SCIIIAYEPIWAIGTGKAATASEANSAIGYIRRVLGDTLGNAAAQTSPILYGGSVNEKNITEILSQTNIDGALVGGASLKAESFVSICRQA 246
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_DEHSB (Triosephosphate isomerase OS=Dehalococcoides sp. (strain BAV1) GN=tpiA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.143e-33 Identity = 84/188 (44.68%), Postives = 112/188 (59.57%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 662 + AQN + ++ GA+TGEIS ML L +VI+GHSERR E+ + V K+ AL GL I CVGE E+ E G T V+ Q K D ++ S I++AYEP+WAIGTGK AT +A +R+ L A + I+YGGSVN N E+ +Q ++DG LVGGASLK E F+ I + A Sbjct: 61 LGAQNLFYQEKGAYTGEISPLMLKEL-CQYVIIGHSERRAYFGETGQVVNQKIKAALQAGLLPIVCVGEKPEENENGQTRQVLETQLKEALDGLNL-SCIIIAYEPIWAIGTGKAATASEANSAIGYIRRVLGDTLGNAAAQTSPILYGGSVNEKNITEILSQTNIDGALVGGASLKAESFVSICRQA 246
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_TREDE (Triosephosphate isomerase OS=Treponema denticola GN=tpiA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.656e-33 Identity = 81/181 (44.75%), Postives = 108/181 (59.67%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 + AQN +++ GA TGE+S L+++ + VILGHSERR I E+++ + KV AL GL+VI CVGE LE+REAG V Q K VS+ + +AYEPVWAIGTGK A+P A +H +RK L A + A I YGGS+ N L + ++DG L+GGA LK E Sbjct: 60 LGAQNMGLEEKGAHTGEVSVLQLLDVGVQAVILGHSERRHIYKETDDLINKKVKLALKHGLEVILCVGELLEEREAGHAEAVCERQIKKGLAEVSAKDLDKVTIAYEPVWAIGTGKNASPEDADAIHSSIRKTLAALYGEKAAKNMIIQYGGSMKPENAAGLLKKHNIDGGLIGGAGLKTE 240
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_PHYAS (Triosephosphate isomerase OS=Phytoplasma australiense GN=tpiA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.656e-33 Identity = 77/194 (39.69%), Postives = 123/194 (63.40%), Query Frame = 3 Query: 90 PDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIAD-RVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 662 P+ + AQN + + GAFTGEIS LV+L + +V+LGHSERR++ E+++ V K+ AL L + C+GETLE +E T + + Q T+A+ D I++AYEPVWAIGTGK A+P +A + ++R+ + S ++ + +I+YGGSV+ N + + Q ++DG LVG ASL+ +F++ ++A Sbjct: 60 PNLKIGAQNAFHESEGAFTGEISPLNLVSLGVKYVLLGHSERRVLFGETDQLVNLKLLKALQNNLSPVLCLGETLETKENNKTKEFLEKQLTQALKDVPQEDLEKILIAYEPVWAIGTGKTASPQEANQTIKQIREKVTNLYSAQVVQSLKILYGGSVSSNNVEAILEQNEIDGVLVGKASLETKDFLNFTQAA 253
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_GRABC (Triosephosphate isomerase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=tpiA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.656e-33 Identity = 86/189 (45.50%), Postives = 111/189 (58.73%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTK-AIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAE 665 V AQ+C + + GA TG++SAEMLV WVILGHSERR E +E V +KV A GL I CVGET ++R +G ++V Q K ++ D ++ SN V+AYEPVWAIGTG+ AT +H +R+ L E RI+YGGSV N L P+V G LVGGASL + D + AE Sbjct: 61 VGAQDCHMARSGAHTGDLSAEMLVEAGAHWVILGHSERRRDHGELSETVREKVIAARQFGLTPIVCVGETEDERASGRETEIVGWQIKGSLPDGFAADSNGVIAYEPVWAIGTGRTATVEDVAMMHAFIREELVRQFG-EAGRGVRILYGGSVKPENAASLLRVPEVGGALVGGASLSAQ--DFLAIAE 246
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_MYCLE (Triosephosphate isomerase OS=Mycobacterium leprae GN=tpiA PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.774e-33 Identity = 78/167 (46.71%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 135 GAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 629 GA+TG+IS L L +V++GHSERR +E + V K A AL L I C+GE LE RE G + Q + +S N+V+ YEPVWAIGTG+VA+ AQEV +RK L A SP++A R++YGGS+N N ++ AQ DVDG LVGGASL Sbjct: 77 GAYTGDISGAFLAKLGCSFVLVGHSERRTYHDEGDALVAAKTAAALKNSLTPIVCIGEYLEIREVGEHVSHCQNQLRGSLAGLSPEQIGNVVIVYEPVWAIGTGRVASAADAQEVCEAIRKELGALASPQVAETVRVLYGGSLNAKNIGDIVAQQDVDGGLVGGASL 243
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_MYCGI (Triosephosphate isomerase OS=Mycobacterium gilvum (strain PYR-GCK) GN=tpiA PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.774e-33 Identity = 81/179 (45.25%), Postives = 105/179 (58.66%), Query Frame = 3 Query: 108 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSW--SNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 AQ+ GA+TGEIS L L + ++GHSERR E++E V K AL GL I C+GE LE REAG+ ++ + +S+ + V+AYEPVWAIGTG+VA+ AQEV +R L S ++AA R++YGGSVN N E+ Q DVDG LVGGASL E Sbjct: 68 AQDVSQHDSGAYTGEISGAFLAKLGCTFAVVGHSERRTYHGETDELVAAKATAALKHGLTPIVCIGEQLEVREAGNHVEFNVNSLRGSLAGLSAEQIAQTVIAYEPVWAIGTGRVASAADAQEVCKAIRDELGNLASADVAAGVRVLYGGSVNAKNVGEIVGQGDVDGALVGGASLDGE 246
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_STRR6 (Triosephosphate isomerase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=tpiA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.235e-33 Identity = 82/194 (42.27%), Postives = 115/194 (59.28%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 656 VAAQNC+ + GAFTGE S ++L + +V++GHSERR +E++E + K + G+ I C GE+LE EAG + V AQ A A++V++ V+AYEP+WAIGTGK A+ AQ++ +R + A+ E+A R+ YGGSV N A PDVDG LVGGASL+ E +D +K Sbjct: 62 VAAQNCYFENAGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMLPIICCGESLETYEAGKAAEFVGAQVSAALAGLTAEQVAA---SVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVQYGGSVKPENVASYMACPDVDGALVGGASLEAESFLALLDFVK 252
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_STRPN (Triosephosphate isomerase OS=Streptococcus pneumoniae GN=tpiA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.235e-33 Identity = 82/194 (42.27%), Postives = 115/194 (59.28%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 656 VAAQNC+ + GAFTGE S ++L + +V++GHSERR +E++E + K + G+ I C GE+LE EAG + V AQ A A++V++ V+AYEP+WAIGTGK A+ AQ++ +R + A+ E+A R+ YGGSV N A PDVDG LVGGASL+ E +D +K Sbjct: 62 VAAQNCYFENAGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMLPIICCGESLETYEAGKAAEFVGAQVSAALAGLTAEQVAA---SVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVQYGGSVKPENVASYMACPDVDGALVGGASLEAESFLALLDFVK 252
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_STRPI (Triosephosphate isomerase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=tpiA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.235e-33 Identity = 82/194 (42.27%), Postives = 115/194 (59.28%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 656 VAAQNC+ + GAFTGE S ++L + +V++GHSERR +E++E + K + G+ I C GE+LE EAG + V AQ A A++V++ V+AYEP+WAIGTGK A+ AQ++ +R + A+ E+A R+ YGGSV N A PDVDG LVGGASL+ E +D +K Sbjct: 62 VAAQNCYFENAGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMLPIICCGESLETYEAGKAAEFVGAQVSAALAGLTAEQVAA---SVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVQYGGSVKPENVASYMACPDVDGALVGGASLEAESFLALLDFVK 252 The following BLAST results are available for this feature:
BLAST of CX295728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295728 ID=CX295728; Name=CX295728; organism=Citrus clementina; type=EST; length=720bpback to top |