CX295728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_STRP4 (Triosephosphate isomerase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=tpiA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.235e-33 Identity = 82/194 (42.27%), Postives = 115/194 (59.28%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 656 VAAQNC+ + GAFTGE S ++L + +V++GHSERR +E++E + K + G+ I C GE+LE EAG + V AQ A A++V++ V+AYEP+WAIGTGK A+ AQ++ +R + A+ E+A R+ YGGSV N A PDVDG LVGGASL+ E +D +K Sbjct: 62 VAAQNCYFENAGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMLPIICCGESLETYEAGKAAEFVGAQVSAALAGLTAEQVAA---SVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVQYGGSVKPENVASYMACPDVDGALVGGASLEAESFLALLDFVK 252
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_STRP2 (Triosephosphate isomerase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=tpiA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.235e-33 Identity = 82/194 (42.27%), Postives = 115/194 (59.28%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE----FIDIIK 656 VAAQNC+ + GAFTGE S ++L + +V++GHSERR +E++E + K + G+ I C GE+LE EAG + V AQ A A++V++ V+AYEP+WAIGTGK A+ AQ++ +R + A+ E+A R+ YGGSV N A PDVDG LVGGASL+ E +D +K Sbjct: 62 VAAQNCYFENAGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMLPIICCGESLETYEAGKAAEFVGAQVSAALAGLTAEQVAA---SVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVQYGGSVKPENVASYMACPDVDGALVGGASLEAESFLALLDFVK 252
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_MYCSS (Triosephosphate isomerase OS=Mycobacterium sp. (strain MCS) GN=tpiA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.235e-33 Identity = 81/179 (45.25%), Postives = 106/179 (59.22%), Query Frame = 3 Query: 108 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 AQ+ GA+TGEIS L L + ++GHSERR +E + V K A A G+ I C+GE L+ REAG+ ++ Q + ++S V+AYEPVWAIGTG+VA AQEV +R L +SP++AA R++YGGSVN N E+ AQ DVDG LVGGASL E Sbjct: 68 AQDVSQHDSGAYTGEISGAFLAKLGCSFAVVGHSERRTYHHEDDALVAAKAAAAFRHGITPIVCIGEHLKVREAGNHVEHNVEQLRGSLAGLTSEQIGQAVIAYEPVWAIGTGRVAGAADAQEVCKAIRDELGKLSSPQLAAGIRVLYGGSVNAKNVGEIVAQEDVDGALVGGASLDGE 246
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_MYCSK (Triosephosphate isomerase OS=Mycobacterium sp. (strain KMS) GN=tpiA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.235e-33 Identity = 81/179 (45.25%), Postives = 106/179 (59.22%), Query Frame = 3 Query: 108 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 AQ+ GA+TGEIS L L + ++GHSERR +E + V K A A G+ I C+GE L+ REAG+ ++ Q + ++S V+AYEPVWAIGTG+VA AQEV +R L +SP++AA R++YGGSVN N E+ AQ DVDG LVGGASL E Sbjct: 68 AQDVSQHDSGAYTGEISGAFLAKLGCSFAVVGHSERRTYHHEDDALVAAKAAAAFRHGITPIVCIGEHLKVREAGNHVEHNVEQLRGSLAGLTSEQIGQAVIAYEPVWAIGTGRVAGAADAQEVCKAIRDELGKLSSPQLAAGIRVLYGGSVNAKNVGEIVAQEDVDGALVGGASLDGE 246
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_MYCSJ (Triosephosphate isomerase OS=Mycobacterium sp. (strain JLS) GN=tpiA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.235e-33 Identity = 81/179 (45.25%), Postives = 106/179 (59.22%), Query Frame = 3 Query: 108 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 AQ+ GA+TGEIS L L + ++GHSERR +E + V K A A G+ I C+GE L+ REAG+ ++ Q + ++S V+AYEPVWAIGTG+VA AQEV +R L +SP++AA R++YGGSVN N E+ AQ DVDG LVGGASL E Sbjct: 68 AQDVSQHDSGAYTGEISGAFLAKLGCSFAVVGHSERRTYHHEDDALVAAKAAAAFRHGITPIVCIGEHLKVREAGNHVEHNVEQLRGSLAGLTSEQIGQAVIAYEPVWAIGTGRVAGAADAQEVCKAIRDELGKLSSPQLAAGIRVLYGGSVNAKNVGEIVAQEDVDGALVGGASLDGE 246
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_CLOB1 (Triosephosphate isomerase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=tpiA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.235e-33 Identity = 82/181 (45.30%), Postives = 105/181 (58.01%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 V AQN ++ GA+TGEI+ +ML L + +VI+GHSERR NE++E V KV A L I C GE+LE+RE T V+ Q K +S +V+AYEP+WAIGTGK AT QA E +R + A +A RI YGGSV K A+ ++DG LVGGASLK E Sbjct: 60 VGAQNMHFEESGAYTGEIAPKMLEELGVHYVIIGHSERRQYFNETDETVNKKVKKAFEHNLIPIVCCGESLEEREGNITEKVLEGQIKVGLKELSKEQVEKLVIAYEPIWAIGTGKTATDEQANETIGYIRTVVKAMYGESVADKIRIQYGGSVKPGTIKAQMAKEEIDGALVGGASLKAE 240
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_CHRVO (Triosephosphate isomerase OS=Chromobacterium violaceum GN=tpiA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.235e-33 Identity = 77/176 (43.75%), Postives = 106/176 (60.23%), Query Frame = 3 Query: 135 GAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSA 662 GAFTGE+SA ML ++ + ++GHSERR E N + K+ A++ G+ + CVGETL QREAG ++VV Q ++D V+AYEPVWAIGTGKVA+ Q E+H ++ W N +A R++YGGSV N + + A +VDG LVGGASL + +I A Sbjct: 72 GAFTGEVSAAMLADVGCRYALVGHSERRQYFREDNAALLAKMRNAIAAGVTPVLCVGETLAQREAGDYLNVVREQLAILSDIAD--GEYVVAYEPVWAIGTGKVASLEQIAEIHAFIKNWCLQNAGG--SAKIRVLYGGSVKAENAEAILATENVDGALVGGASLDADSFRVICQA 243
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS1_RHIME (Triosephosphate isomerase 1 OS=Rhizobium meliloti GN=tpiA1 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.144e-33 Identity = 82/189 (43.39%), Postives = 110/189 (58.20%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSAE 665 + AQ+C K+ GA TGE+SAEM+ + VI+GHSERR E + V K A L I CVGET E+R+AG T+D++ Q ++ N V+AYEPVWAIGTG T +E H +R+ L + E RI+YGGSV +N KEL +VDG L+GGASLK +F+ I ++ E Sbjct: 65 IGAQDCHQKQSGAHTGEVSAEMVADCFGTHVIVGHSERRTDHGEGDALVRAKTEAAHGADLVAIVCVGETEEERKAGRTLDILKRQLSESLPDQATAENTVIAYEPVWAIGTGLTPTVSDVEEAHAFMRRELVSRFGAE-GGKMRILYGGSVKPSNAKELMGVANVDGALIGGASLKADDFLAIYRAYE 252
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SYNJB (Triosephosphate isomerase OS=Synechococcus sp. GN=tpiA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.064e-32 Identity = 85/196 (43.37%), Postives = 110/196 (56.12%), Query Frame = 3 Query: 69 LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDII 653 + + S D V AQN + GAFTGEIS ML L + +VI+GHSERR E++E V ++A A GL I CVGE+ +QRE G T + Q + N+V+AYEP+WAIGTG+ +A V +R+ L P I+YGGSV N EL AQP++DG LVGGASL P EF I+ Sbjct: 55 VAEQSRGSDIAVGAQNLHWEDQGAFTGEISGPMLAELGVRYVIVGHSERRQYFGETDETVNRRLAAAQRHGLTPILCVGESQQQREQGLTESWIVGQLDRALQGI-DLENLVIAYEPIWAIGTGQTCAAQEANRVIGLIRQHLGNAQLP-------ILYGGSVKAGNIDELMAQPEIDGVLVGGASLDPQEFARIV 242
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_STRAW (Triosephosphate isomerase OS=Streptomyces avermitilis GN=tpiA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.064e-32 Identity = 87/186 (46.77%), Postives = 107/186 (57.53%), Query Frame = 3 Query: 108 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIK 656 AQ+ GA+TGEIS ML L +V +GHSERR +E++E V KV + GL I CVGE LE REAG+ + Q + V + IV+AYEPVWAIGTGKV AQEV +R L S E+A RI YGGSV N E+ A+PD+DG LVGGASL EF+ I + Sbjct: 69 AQDVSAHDSGAYTGEISGSMLAKLKCTYVAVGHSERRQYHHETDEIVNAKVKASFRHGLIPILCVGEELEVREAGNHVTHTLTQVEGGLKDVPAEQAETIVIAYEPVWAIGTGKVCGADDAQEVCAAIRAKLAELYSQELADQVRIQYGGSVKSGNVAEIMAKPDIDGALVGGASLDADEFVKIAR 254 The following BLAST results are available for this feature:
BLAST of CX295728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295728 ID=CX295728; Name=CX295728; organism=Citrus clementina; type=EST; length=720bpback to top |