CX295729

Overview
NameCX295729
Unique NameCX295729
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: LYN_HUMAN (Tyrosine-protein kinase Lyn OS=Homo sapiens GN=LYN PE=1 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15
Identity = 62/190 (32.63%), Postives = 94/190 (49.47%), Query Frame = 1
Query:  139 YYKHHD-VIKLLEEHGAKPSTAPMHVQNAREVPEYEID-PKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            Y K  D + + LE+    P       ++A E+P   I   K L      E+  G +       T+VAVKTL     +    V+AF++E  L++ ++H  +V+    VT+  P+ I+TEY+ KG L  +LK     K  L   + F+  IA GM Y+        IHRDL  +N+L  +S   K+ADFGL+
Sbjct:  211 YQKQADGLCRRLEKACISPKPQKPWDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYN----NSTKVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLA 389          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: EPHB2_CHICK (Ephrin type-B receptor 2 OS=Gallus gallus GN=EPHB2 PE=1 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15
Identity = 50/142 (35.21%), Postives = 81/142 (57.04%), Query Frame = 1
Query:  280 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQK-GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSSY 702
            E+  G  ++   R   VA+KTL +  +T++ + + F+ E +++ +  HPNV+   G VT+S+P+MI+TE++  G L ++L+Q  G       V     IA GM YL +      +HRDL   NIL + +   KV+DFGLS +
Sbjct:  652 EVCSGHLKLPGKREIFVAIKTL-KSGYTEKQR-RDFLSEASIMGQFDHPNVIHLEGVVTKSSPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRF 788          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: EPHA5_RAT (Ephrin type-A receptor 5 OS=Rattus norvegicus GN=Epha5 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15
Identity = 52/140 (37.14%), Postives = 75/140 (53.57%), Query Frame = 1
Query:  280 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQK-GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            E+  G  ++   R   VA KTL  +V   E + + F+ E +++ +  HPN++   G VT+S P+MIVTEY+  G L  +LK+  G       V     IA GM YL +      +HRDL   NIL + +   KV+DFGLS
Sbjct:  690 EVCSGRLKLPGKRELPVATKTL--KVGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGIAAGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLS 824          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: BMX_HUMAN (Cytoplasmic tyrosine-protein kinase BMX OS=Homo sapiens GN=BMX PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15
Identity = 47/139 (33.81%), Postives = 76/139 (54.68%), Query Frame = 1
Query:  292 GTFRIASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG-ALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSSY 702
            G  ++  W+G   VAVK + E   ++++    F  E   + K+ HP +V+F G  ++  P+ IVTEY+  G L  YL+  G  L+P+  ++   D+  GM +L  ++    IHRDL   N L D    +KV+DFG++ Y
Sbjct:  429 GVVQLGKWKGQYDVAVKMIKEGSMSEDE----FFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRY 560          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: ABL_MLVAB (Tyrosine-protein kinase transforming protein Abl OS=Abelson murine leukemia virus GN=ABL PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15
Identity = 48/125 (38.40%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  328 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            VAVKTL E+      +V+ F+ E A++++I+HPN+VQ LG  T+  P  I+TE++  G+L  YL++  +  +   + +  A  I+  M YL +      IHRDL   N L  ++  +KVADFGLS
Sbjct:  154 VAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLS 271          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: ABL_FSVHY (Tyrosine-protein kinase transforming protein Abl OS=Feline sarcoma virus (strain Hardy-Zuckerman 2) GN=ABL PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15
Identity = 48/125 (38.40%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  328 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            VAVKTL E+      +V+ F+ E A++++I+HPN+VQ LG  T+  P  I+TE++  G+L  YL++  +  +   + +  A  I+  M YL +      IHRDL   N L  ++  +KVADFGLS
Sbjct:  217 VAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLS 334          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: ABL1_MOUSE (Proto-oncogene tyrosine-protein kinase ABL1 OS=Mus musculus GN=Abl1 PE=1 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15
Identity = 48/125 (38.40%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  328 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            VAVKTL E+      +V+ F+ E A++++I+HPN+VQ LG  T+  P  I+TE++  G+L  YL++  +  +   + +  A  I+  M YL +      IHRDL   N L  ++  +KVADFGLS
Sbjct:  268 VAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLS 385          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: ABL1_HUMAN (Proto-oncogene tyrosine-protein kinase ABL1 OS=Homo sapiens GN=ABL1 PE=1 SV=4)

HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15
Identity = 48/125 (38.40%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  328 VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ--KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            VAVKTL E+      +V+ F+ E A++++I+HPN+VQ LG  T+  P  I+TE++  G+L  YL++  +  +   + +  A  I+  M YL +      IHRDL   N L  ++  +KVADFGLS
Sbjct:  268 VAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLS 385          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15
Identity = 59/196 (30.10%), Postives = 95/196 (48.47%), Query Frame = 1
Query:  115 STPLADAVYYKHHDVIKLLEEHGAKPSTAPMHVQNAREVPEYEIDPKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ-KGALKP-TLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            STPL       H    +LL E     S A    +   +  +   + ++L       + +G  +   W    VA+K L      D + +   ++E+ LL  + HPN+V+ LG   +    ++V EY+P G L  +L++ +G+  P TL +  A   A+ + YLH +    I HRD++ +NIL D   + KVADFGLS
Sbjct:  311 STPLRS-----HLSAKRLLSEAAGNSSVAFFPYKEIEKATDGFSEKQKLGIGAYGTVYRGKLQNDEW----VAIKRLRHR---DSESLDQVMNEIKLLSSVSHPNLVRLLGCCIEQGDPVLVYEYMPNGTLSEHLQRDRGSGLPWTLRLTVATQTAKAIAYLHSSMNPPIYHRDIKSTNILLDYDFNSKVADFGLS 494          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15
Identity = 54/170 (31.76%), Postives = 92/170 (54.12%), Query Frame = 1
Query:  211 VQNAREVPEYEIDPKELDFSNSVEITKG----TFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLA----VKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            V+ AR     E++    +FS +  +  G     ++     G  VAVK   +    DEDK++ FI+E+ +L +I H +VV+ LG   ++   ++V E++  G+L  ++ ++ A   T+     ++ A+DIA  ++YLH      I HRD++ +NIL D+    KVADFG S
Sbjct:  426 VEKARIFTSKELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVK---KSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVADFGTS 592          
The following BLAST results are available for this feature:
BLAST of CX295729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
LYN_HUMAN3.437e-1532.63Tyrosine-protein kinase Lyn OS=Homo sapiens GN=LYN... [more]
EPHB2_CHICK3.437e-1535.21Ephrin type-B receptor 2 OS=Gallus gallus GN=EPHB2... [more]
EPHA5_RAT3.437e-1537.14Ephrin type-A receptor 5 OS=Rattus norvegicus GN=E... [more]
BMX_HUMAN3.437e-1533.81Cytoplasmic tyrosine-protein kinase BMX OS=Homo sa... [more]
ABL_MLVAB3.437e-1538.40Tyrosine-protein kinase transforming protein Abl O... [more]
ABL_FSVHY3.437e-1538.40Tyrosine-protein kinase transforming protein Abl O... [more]
ABL1_MOUSE3.437e-1538.40Proto-oncogene tyrosine-protein kinase ABL1 OS=Mus... [more]
ABL1_HUMAN3.437e-1538.40Proto-oncogene tyrosine-protein kinase ABL1 OS=Hom... [more]
WAKLO_ARATH4.489e-1530.10Wall-associated receptor kinase-like 14 OS=Arabido... [more]
WAKLM_ARATH4.489e-1531.76Wall-associated receptor kinase-like 17 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionC05075C07SK DroRLeaf1 Citrus clementina cDNA clone C05075C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295729 ID=CX295729; Name=CX295729; organism=Citrus clementina; type=EST; length=718bp
CCGTGACATCGATAACGCACCGCTTTGCATGTTGCCGCTTGTCAGGGAAG
GACTGATGTTGTACGGCTGTTGCTCAGCCGTGGAGCTGACGTGGATCCTG
AAGACCGCTGGGGCAGCACTCCTCTTGCAGATGCGGTGTATTACAAGCAC
CACGACGTGATCAAACTTTTGGAGGAACATGGTGCAAAGCCTTCAACAGC
TCCCATGCATGTTCAAAATGCTCGTGAAGTCCCAGAGTACGAAATTGATC
CTAAAGAGCTCGATTTTTCCAACAGTGTTGAGATTACAAAGGGAACTTTT
CGGATTGCATCATGGCGTGGAACACAAGTTGCTGTGAAAACACTTGGAGA
GGAAGTTTTCACTGATGAGGATAAAGTGAAGGCATTCATTGACGAGCTTG
CATTACTTCAGAAAATTCGTCATCCAAATGTTGTCCAGTTTTTGGGTGCT
GTAACCCAAAGCACTCCAATGATGATTGTCACAGAATATTTACCCAAGGG
AGATCTCCGTGCATATCTGAAGCAAAAGGGTGCATTAAAGCCCACACTAG
CTGTGAAGTTCGCTCTTGACATTGCTAGGGGAATGAATTATTTGCATGAA
AACAGACCTGAAGCAATAATTCATCGGGATCTTGAGCCTTCAAATATACT
GCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGACTCAGCAGCT
ACTGAAATTTGCAATACA
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