CX295734

Overview
NameCX295734
Unique NameCX295734
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length790
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LEC_PEA (Lectin OS=Pisum sativum GN=LECA PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14
Identity = 61/196 (31.12%), Postives = 93/196 (47.45%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX---AVELDTYKNDYWSDPDAN-HMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAG-----NPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 562
            VGR LYS P+  W       A   T+FT  I+  PN+ + ADG TF  A  DT P T                    AVE DT+ N  W   + + H+GID+     N  KS+++    L++G    V I ++  T +L V + Y       N     +   + L + +P  V +GF+A+TG +++ +H+VL W+F
Sbjct:   71 VGRALYSSPIHIWDRETGNVANFVTSFTFVINA-PNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSAEYDKTTQTVAVEFDTFYNAAWDPSNRDRHIGIDV-----NSIKSVNTKSWKLQNGEEANVVIAFNAATNVLTVSLTYPNSLEEENVTSYTLSDVVSLKDVVPEWVRIGFSATTGAEYA-AHEVLSWSF 259          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LEC2_CYTSC (2-acetamido-2-deoxy-D-galactose-binding seed lectin 2 OS=Cytisus scoparius PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14
Identity = 68/203 (33.50%), Postives = 93/203 (45.81%), Query Frame = 2
Query:   11 AAKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPN-TTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX----AVELDTYKNDYWSDPDAN-HMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAY-AGNPLQK---LIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTF 562
            AA  +GR LYS P+  W       A  +T F+  IS  PN +T + DG+ F  A  DT P +                     AVE DTY N  W DP  N H+GID+     N  KS   S    K+G    V I Y   +K L   + Y +G    K   +I   + L  T+P  V +GF+A+TG   ++ E+H +L W+F
Sbjct:   43 AAYSLGRALYSTPIHIWDKSTGDEASFATFFSFVISDAPNPSTAATDGLAFFLAPADTQPQSAGGYLGLFEKDSSYNSSNQIVAVEFDTYYNSAW-DPQTNPHIGIDV-----NTIKSKKVSSWGFKNGNVATVLITYQPSSKSLVASLVYPSGQTSDKTSYIISANVDLKATVPEWVRIGFSATTGQTDNYIETHDILSWSF 239          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LECB_SPAPA (Seed lectin beta chain OS=Spatholobus parviflorus PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.431e-14
Identity = 56/194 (28.87%), Postives = 84/194 (43.30%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX----AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPD--FSESHQVLDWTFTT 568
            +GR  YS P+  W       A  +T+F   I   PN    ADG+ F  A   S P                      AVE DTY+N  ++DP   H+G D+     N   S+ +    L +G   +V I Y+   K+L   + Y  +    ++   + LS  +P  V VGF+A+TG    + E+H V  W+F +
Sbjct:   48 LGRATYSAPINIWDSATGLVASFATSFRFTIYA-PNIATIADGLAFFLAPVASAPDSGGGFLGLFDSAVGDTTYQTVAVEFDTYENTVFTDPPYTHIGFDV-----NSISSIKTVKWSLANGEAAKVLITYNSAVKLLVASLVYPSSKTSFILADIVDLSSVLPEWVRVGFSAATGASKGYIETHDVFSWSFAS 235          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LEC1_CYTSE (Anti-H(O) lectin 1 OS=Cytisus sessilifolius PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.431e-14
Identity = 60/205 (29.27%), Postives = 89/205 (43.41%), Query Frame = 2
Query:    2 SAEAAKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTE------XXXXXXXXXXXXXXXXAVELDTYKNDYWS--DPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTFTT 568
            S  A + +GR LY+ PV  W       A   T+F+  +   P  ++  DG+TF  A   S                          AVE DTY    ++  DPD  H+G+D+     N  KS+ +   D ++G    V I Y   TK L V ++Y  +    ++   + L   +P  V VGF+A  G   +F E+H VL W FT+
Sbjct:   39 SKPATRSIGRALYAAPVHIWDSTTGRVASFETSFSFVVKDEPEKSNGVDGLTFFLAPANSQIPSGSSAGLFGLFNSSDNKSSNQIIAVEFDTYFGKTYNPWDPDFKHIGVDV-----NSIKSIKTVKWDWRNGEVANVVITYRAPTKSLTVSLSYPSDQTSNIVTASVDLKAILPEWVSVGFSAGVGNAAEF-ETHDVLSWYFTS 237          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LECA_SPAPA (Seed lectin alpha chain OS=Spatholobus parviflorus PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.982e-14
Identity = 56/194 (28.87%), Postives = 83/194 (42.78%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX----AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFS--ESHQVLDWTFTT 568
            +GR  YS P+  W       A  +T+F   I   PN    ADG+ F  A   S P                      AVE DTY+N  ++DP   H+G D+     N   S+ +    L +G   +V I Y+   K+L   + Y  +    ++   + LS  +P  V VGF+A+TG      E+H V  W+F +
Sbjct:   48 LGRATYSAPINIWDSATGLVASFATSFRFTIYA-PNIATIADGLAFFLAPVASAPDSGGGFLGLFDSAVSGSTYQTVAVEFDTYENTVFTDPPYTHIGFDV-----NSISSIKTVKWSLANGEAAKVLITYNSAVKLLVASLVYPSSKTSFILADIVDLSSVLPEWVRVGFSAATGASGGKIETHDVFSWSFAS 235          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LEC_LENCT (Lectin OS=Lens culinaris subsp. tomentosus PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.304e-13
Identity = 62/197 (31.47%), Postives = 92/197 (46.70%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX---AVELDTYKNDYWSDPD--ANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAG-----NPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 562
            VGR LYS P+  W       A   T+FT  I   P++ + ADG TF  A  DT P T                    AVE DT+ N  W DP     H+GID+     N  KS+++   +L++G    V I ++  T +L V + Y       N     +   + L + +P  V +GF+A+TG +F+ +H+V  W+F
Sbjct:   71 VGRALYSTPIHIWDRDTGSVANFVTSFTFVIDA-PSSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKEYDKTSQTVAVEFDTFYNAAW-DPSNKERHIGIDV-----NSIKSVNTKSWNLQNGERANVVIAFNAATNVLTVTLTYPNSLEEENVTSYTLNEVVPLKDVVPEWVRIGFSATTGAEFA-AHEVHSWSF 259          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LEC_LENCC (Lectin OS=Lens culinaris subsp. culinaris PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.304e-13
Identity = 62/197 (31.47%), Postives = 92/197 (46.70%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX---AVELDTYKNDYWSDPD--ANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAG-----NPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 562
            VGR LYS P+  W       A   T+FT  I   P++ + ADG TF  A  DT P T                    AVE DT+ N  W DP     H+GID+     N  KS+++   +L++G    V I ++  T +L V + Y       N     +   + L + +P  V +GF+A+TG +F+ +H+V  W+F
Sbjct:   71 VGRALYSTPIHIWDRDTGNVANFVTSFTFVIDA-PSSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKEYDKTSQTVAVEFDTFYNAAW-DPSNKERHIGIDV-----NSIKSVNTKSWNLQNGERANVVIAFNAATNVLTVTLTYPNSLEEENVTSYTLNEVVPLKDVVPEWVRIGFSATTGAEFA-AHEVHSWSF 259          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LEC_LENCO (Lectin OS=Lens culinaris subsp. orientalis PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.703e-13
Identity = 62/197 (31.47%), Postives = 91/197 (46.19%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX---AVELDTYKNDYWSDPD--ANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAG-----NPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 562
            VGR LYS P+  W       A   T+FT  I   P++ + ADG TF  A  DT P T                    AVE DT+ N  W DP     H+GID+     N  KS+ +   +L++G    V I ++  T +L V + Y       N     +   + L + +P  V +GF+A+TG +F+ +H+V  W+F
Sbjct:   71 VGRALYSTPIHIWDRDTGNVANFVTSFTFVIDA-PSSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKEYDKTSQTVAVEFDTFYNAAW-DPSNKERHIGIDV-----NSIKSVSTKSWNLQNGERANVVIAFNAATNVLTVTLTYPNSLEEENVTSYTLNEVVPLKDVVPEWVRIGFSATTGAEFA-AHEVHSWSF 259          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LEC1_PSOTE (Basic agglutinin OS=Psophocarpus tetragonolobus GN=WBAI PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13
Identity = 61/196 (31.12%), Postives = 90/196 (45.92%), Query Frame = 2
Query:   26 GRVLYSQPVTAWP------AMISTTFTIRI-SPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX-AVELDTYKNDYWSDPDANHMGIDIANLTSNPAK--SLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGP------DFSESHQVLDWTFT 565
            GR LY++PV  W       A   T F+  I  P+P     ADG+ F  A   +   E                 AVE DT++N +  DP   H+GID+ ++ S      +LD+ GI         V I YD  TKIL+V + +        I   + L + +P SV VGF+A+TG       + +E+H +L W+F+
Sbjct:   48 GRALYAKPVQVWDSTTGNVASFETRFSFSIRQPFPRP-HPADGLVFFIAPPNTQTGEGGGYFGIYNPLSPYPFVAVEFDTFRNTW--DPQIPHIGIDVNSVISTKTVPFTLDNGGI-------ANVVIKYDASTKILHVVLVFPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSWSFS 233          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LEC_ERYCG (Lectin OS=Erythrina crista-galli PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.954e-13
Identity = 57/192 (29.69%), Postives = 84/192 (43.75%), Query Frame = 2
Query:   26 GRVLYSQPVTAWPAMIST--TFTIRIS-----PYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX----AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGP--DFSESHQVLDWTF 562
            GR LY++PV  W +   T  +F  R S     PY      ADG+ F      S P +                    AVE DT+ N  W  P   H+GID+     N  +S+ +    L +G+   V I YD  +KIL+V + Y  +     I   + + + +P  V VG + +TG   D +E+H V  W+F
Sbjct:   49 GRTLYTKPVHMWDSTTGTVASFETRFSFSIEQPYTRPLP-ADGLVFFMGPTKSKPAQGYGYLGVFNNSKQDNSYQTLAVEFDTFSNP-WDPPQVPHIGIDV-----NSIRSIKTQPFQLDNGQVANVVIKYDAPSKILHVVLVYPSSGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSF 233          
The following BLAST results are available for this feature:
BLAST of CX295734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
LEC_PEA1.179e-1431.12Lectin OS=Pisum sativum GN=LECA PE=1 SV=1[more]
LEC2_CYTSC1.179e-1433.502-acetamido-2-deoxy-D-galactose-binding seed lecti... [more]
LECB_SPAPA3.431e-1428.87Seed lectin beta chain OS=Spatholobus parviflorus ... [more]
LEC1_CYTSE3.431e-1429.27Anti-H(O) lectin 1 OS=Cytisus sessilifolius PE=1 S... [more]
LECA_SPAPA9.982e-1428.87Seed lectin alpha chain OS=Spatholobus parviflorus... [more]
LEC_LENCT1.304e-1331.47Lectin OS=Lens culinaris subsp. tomentosus PE=3 SV... [more]
LEC_LENCC1.304e-1331.47Lectin OS=Lens culinaris subsp. culinaris PE=3 SV=... [more]
LEC_LENCO1.703e-1331.47Lectin OS=Lens culinaris subsp. orientalis PE=3 SV... [more]
LEC1_PSOTE3.793e-1331.12Basic agglutinin OS=Psophocarpus tetragonolobus GN... [more]
LEC_ERYCG4.954e-1329.69Lectin OS=Erythrina crista-galli PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05075C12SK DroRLeaf1 Citrus clementina cDNA clone C05075C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295734 ID=CX295734; Name=CX295734; organism=Citrus clementina; type=EST; length=790bp
TTCGGCCGAGGCCGCTAAAAAGGTTGGACGGGTTTTATACAGCCAGCCTG
TGACTGCATGGCCAGCTATGATTAGTACCACCTTCACCATTAGGATCTCA
CCCTACCCAAATACAACGGATTCTGCAGATGGCATGACGTTTGTTTTTGC
AACCGATACCAGCCCTCCAACTGAAAACTCCGCCGGCGGAAATCTTGGAC
TGAGTAACGGTGTTTCGCAATTAGCCGTGGAGCTGGACACTTACAAGAAC
GACTACTGGTCTGATCCAGATGCTAACCATATGGGCATTGACATAGCAAA
CTTAACATCGAATCCAGCCAAGAGTCTCGACAGCTCTGGTATTGATCTCA
AAAGTGGAAGACCGATCCAGGTTCACATTTATTACGATGGATGGACGAAA
ATACTCTATGTTTATGTGGCATATGCGGGGAACCCACTTCAGAAGCTTAT
TGAAAGACCTATCCTCTTGTCAGAAACAATTCCAAGCTCAGTCTATGTTG
GCTTCACAGCATCCACAGGGCCCGACTTTTCAGAAAGCCATCAGGTGCTT
GATTGGACCTTCACAACGTTCCCATTGCCTTCTTCTTCTCTGGAGGAGCA
AAACCTGGCGATGCCAATATAATTCTAAACCGTCCTTGAAAAACCATGTC
ACATAAAAAATTATAATAAATAAAAATAACTAATATCGTCAATAAAGTGA
CATGGCTCTAGAAGCTGACTAAGATTAATATTGTTGGCTTGCTATCTGAG
ATGTTCTGCATGTACTTGTGTAGAAATGTCATATTCAGCT
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