CX295734

Overview
NameCX295734
Unique NameCX295734
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length790
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LCB2_ROBPS (Bark agglutinin I polypeptide B OS=Robinia pseudoacacia PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.954e-13
Identity = 59/193 (30.57%), Postives = 89/193 (46.11%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX----AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTF 562
            +GRVLY+ P   W       A   T+F+  I   PN   +ADG+ F  A   ++ P +                    AVE DT++N  W DP+  HMGID+     N  +S+ +   D  +G    V I Y+  TK L   + Y       ++   + L + +P  V VGFTA+TG   D+ +++ VL W+F
Sbjct:   78 IGRVLYAAPFQIWDSTTGNVASFVTSFSFIIKA-PNEGKTADGLVFFLAPVGSTQPLKGGGLLGLFKDESYNKSNQIVAVEFDTFRNVAW-DPNGIHMGIDV-----NSIQSVRTVRWDWANGEVANVFISYEASTKSLTASLVYPSLEKSFILSAIVDLKKVLPEWVRVGFTATTGLSEDYVQTNDVLSWSF 263          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LEC_BOWMI (Lectin OS=Bowringia mildbraedii PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.470e-13
Identity = 60/192 (31.25%), Postives = 91/192 (47.40%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP-----AMISTTFTIRISPYPNTTDSADGMTFVFAT-DTSPPTEXXXXXXXXXXXXXXXX------AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 562
            VGR LY+ P+  W      A   TTFT  IS   +T  +A  +TF  A+ DT  P+                       AVE DTY N    DP+  H+GID+     N  +S  +S  D ++G+    HI Y+  +K L V  +Y  N    ++   + L+   P  V VGF+A+TG  +++++ +L W+F
Sbjct:   48 VGRALYTAPIRLWQSSSLVASFETTFTFSISQGSSTPAAA--LTFFIASPDTKIPSGSGGRLLGLFGSSNNAGSDNGVVAVEFDTYPNTDIGDPNYRHIGIDV-----NSIRSKAASKWDWQNGKTATAHISYNSASKRLSVVSSYP-NSSPVVVSFDVELNNVGPPDVRVGFSATTG-QYTQTNNILAWSF 230          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LEC_LENCU (Lectin OS=Lens culinaris PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-12
Identity = 61/197 (30.96%), Postives = 91/197 (46.19%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX---AVELDTYKNDYWSDPD--ANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAG-----NPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 562
            VGR LYS P+  W       A   T+FT  I   P++ + AD  TF  A  DT P T                    AVE DT+ N  W DP     H+GID+     N  KS+++   +L++G    V I ++  T +L V + Y       N     +   + L + +P  V +GF+A+TG +F+ +H+V  W+F
Sbjct:   71 VGRALYSTPIHIWDRDTGNVANFVTSFTFVIDA-PSSYNVADEFTFFIAPVDTKPQTGGGYLGVFNSKEYDKTSQTVAVEFDTFYNAAW-DPSNKERHIGIDV-----NSIKSVNTKSWNLQNGERANVVIAFNAATNVLTVTLTYPNSLEEENVTSYTLNEVVPLKDVVPEWVRIGFSATTGAEFA-AHEVHSWSF 259          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LECR_CLALU (Lectin-related protein (Fragment) OS=Cladrastis lutea PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-12
Identity = 63/211 (29.86%), Postives = 92/211 (43.60%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX-------AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTFTTFPLPSSSLEEQNLA 610
            VGR LYS PV  W       A   T+FT  +   PN   +ADG+ F  A    P T+                       AVE DT+ N +  DP A H+GID+     N  +S  ++    ++G    V I Y    + L   + Y  +    ++   + L   +P  V VGF+A+TG    + E+H VL W+FT+     +S  +QN A
Sbjct:   83 VGRALYSDPVHIWDSSTGSVASFVTSFTFVVEA-PNENKTADGIAFFLAP---PDTQVQSLGGFLGLFNSSVYNSSNQILAVEFDTFSNSW--DPTARHIGIDV-----NSIESTRTATWGWRNGEVAIVLITYVAPAETLIASLTYPSSQTSYILSAAVDLKSILPEWVRVGFSAATGRSAGYVETHDVLSWSFTSTLETGNSGAKQNNA 282          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LEC_ERYCO (Lectin OS=Erythrina corallodendron PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12
Identity = 58/208 (27.88%), Postives = 86/208 (41.35%), Query Frame = 2
Query:   26 GRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX----AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGP--DFSESHQVLDWTFTTFPLPSSSLEEQNLAM 613
            GR LY++PV  W       A   T F+  I         ADG+ F      S P +                     VE DT+ N  W  P   H+GID+     N  +S+ +    L +G+   V I YD  +KIL+  + Y  +     I   + + + +P  V VG + +TG   D +E+H V  W+F       +SL E N A+
Sbjct:   75 GRTLYAKPVHIWDMTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGIFNNSKQDNSYQTLGVEFDTFSNP-WDPPQVPHIGIDV-----NSIRSIKTQPFQLDNGQVANVVIKYDASSKILHAVLVYPSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSF------QASLPETNDAV 270          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LCS2_ROBPS (Seed agglutinin 2 OS=Robinia pseudoacacia PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 55/194 (28.35%), Postives = 85/194 (43.81%), Query Frame = 2
Query:   17 KKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX----AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPD--FSESHQVLDWTF 562
            K +GR LY+ P   W       A   T+F+  I   PN   +ADG+ F  A   + P +                    AVE DT+ N +W DP   HMGI++     N   S+ +   +  +G    V I Y+  TK L   + Y       +I   + + + +P  V  GF+A+TG D  + +++ VL W+F
Sbjct:   76 KSLGRALYAAPFQIWDSTTGNVASFVTSFSFIIQA-PNPATTADGLAFFLAPVDTQPLDLGGMLGIFKNGYFNKSNQIVAVEFDTFSNRHW-DPTGRHMGINV-----NSIVSVKTVPWNWANGEVANVFISYEASTKSLTASLVYPSLETSFIIHAIVDVKDVLPEWVRFGFSATTGIDTGYVQTNDVLSWSF 262          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LECG_ARAHY (Galactose-binding lectin OS=Arachis hypogaea PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 2.081e-11
Identity = 57/192 (29.69%), Postives = 83/192 (43.23%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFAT-DTSPPTEXXXXXXXXXXXXXXXX---AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTFTT 568
            VGRVLY+ PV  W       A   T+F+  +    +  D ADG+ F  A  DT  P                      VE DTY N  ++DP  +H+GID+     N   S+ +   +  SG  ++V + YD  TK L V V      +   I + + L   +P  V  GF+AS      + H +  W+FT+
Sbjct:   66 VGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDY-DPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDV-----NSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDI-TTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTS 250          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LCB1_ROBPS (Bark agglutinin I polypeptide A OS=Robinia pseudoacacia PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.081e-11
Identity = 54/196 (27.55%), Postives = 87/196 (44.39%), Query Frame = 2
Query:   11 AAKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX----AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPD--FSESHQVLDWTF 562
            + K +GR LY+ P   W       A   T+F+  I   PN T +ADG+ F  A   + P +                    AVE DT+ N ++ DP   HMGI++     N   S+ +   +  +G    V I Y+  TK L   + Y       ++   + + + +P  V  GF+A+TG D  + +++ VL W+F
Sbjct:   74 SGKSLGRALYAAPFQIWDSTTGNVASFVTSFSFIIQA-PNPTTTADGLAFFLAPVDTQPLDVGGMLGIFKDGYFNKSNQIVAVEFDTFSNIHF-DPKGRHMGINV-----NSIVSIKTVPWNWTNGEVANVFISYEASTKSLTASLVYPSLETSFIVHAIVDVKDVLPEWVRFGFSATTGIDKGYVQTNDVLSWSF 262          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LEC1_LABAL (Lectin 1 OS=Laburnum alpinum PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.718e-11
Identity = 59/216 (27.31%), Postives = 88/216 (40.74%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP--------AMISTTFTIRISPYP---NTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX------AVELDTYKNDYWS--DPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTFTTFPLPSSSLEEQNLAM 613
            + R LY+ P+ AW         A  +T+F+  +   P      D  DG+ F  A   S                          AVE DTY    ++  DPD  H+G+D+     N  KS+ +   D ++G    V I Y   TK L V ++Y  +    ++   + L   +P  V VGF+A  G     +H +L W FT      S+LE  N A+
Sbjct:   42 IKRALYAAPIHAWDDDSETGKVASFATSFSFVVKEPPIQSRKADGVDGLAFFLAPANSQIPSGSSAGMFGLFCSSDYNSSNQIIAVEFDTYFGKAYNPWDPDFKHIGVDV-----NSIKSIKTVKWDWRNGDVANVVITYRAPTKSLTVSLSYPSDQTSNIVTASVDLKAILPEWVSVGFSAGVGNAAKFNHDILSWYFT------SNLEPNNPAV 246          
BLAST of CX295734 vs. ExPASy Swiss-Prot
Match: LEC_LATSP (Lectin OS=Lathyrus sphaericus PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.550e-11
Identity = 59/190 (31.05%), Postives = 83/190 (43.68%), Query Frame = 2
Query:   23 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTE---XXXXXXXXXXXXXXXXAVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 562
            VGR LYS P+  W       A  + +FT  I P  ++   ADG TF  A  DT P  +                   AVE DT+ N  W DPD  H+G+DI ++ S   +  +    D  S      +I Y   T  L V V Y  +     +   + L + +P  V VG +AST   +S +H+V  W+F
Sbjct:   51 VGRALYSAPIHIWDRKTGKVADFTASFTFYIRPNSDSQVVADGFTFFIAPVDTQPRGDGGLLGVFNREEYDPTIHTVAVEFDTFHNQPW-DPDYIHIGVDINSIKSRITRPWNPH-YDTYS----IAYIAYKAATNELDVTVTYPNSRDYATLREVVDLKQIVPEWVRVGLSASTATYYS-AHEVYSWSF 233          
The following BLAST results are available for this feature:
BLAST of CX295734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
LCB2_ROBPS4.954e-1330.57Bark agglutinin I polypeptide B OS=Robinia pseudoa... [more]
LEC_BOWMI6.470e-1331.25Lectin OS=Bowringia mildbraedii PE=1 SV=1[more]
LEC_LENCU1.104e-1230.96Lectin OS=Lens culinaris PE=1 SV=2[more]
LECR_CLALU1.104e-1229.86Lectin-related protein (Fragment) OS=Cladrastis lu... [more]
LEC_ERYCO2.459e-1227.88Lectin OS=Erythrina corallodendron PE=1 SV=3[more]
LCS2_ROBPS5.477e-1228.35Seed agglutinin 2 OS=Robinia pseudoacacia PE=1 SV=... [more]
LECG_ARAHY2.081e-1129.69Galactose-binding lectin OS=Arachis hypogaea PE=1 ... [more]
LCB1_ROBPS2.081e-1127.55Bark agglutinin I polypeptide A OS=Robinia pseudoa... [more]
LEC1_LABAL2.718e-1127.31Lectin 1 OS=Laburnum alpinum PE=1 SV=1[more]
LEC_LATSP3.550e-1131.05Lectin OS=Lathyrus sphaericus PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05075C12SK DroRLeaf1 Citrus clementina cDNA clone C05075C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295734 ID=CX295734; Name=CX295734; organism=Citrus clementina; type=EST; length=790bp
TTCGGCCGAGGCCGCTAAAAAGGTTGGACGGGTTTTATACAGCCAGCCTG
TGACTGCATGGCCAGCTATGATTAGTACCACCTTCACCATTAGGATCTCA
CCCTACCCAAATACAACGGATTCTGCAGATGGCATGACGTTTGTTTTTGC
AACCGATACCAGCCCTCCAACTGAAAACTCCGCCGGCGGAAATCTTGGAC
TGAGTAACGGTGTTTCGCAATTAGCCGTGGAGCTGGACACTTACAAGAAC
GACTACTGGTCTGATCCAGATGCTAACCATATGGGCATTGACATAGCAAA
CTTAACATCGAATCCAGCCAAGAGTCTCGACAGCTCTGGTATTGATCTCA
AAAGTGGAAGACCGATCCAGGTTCACATTTATTACGATGGATGGACGAAA
ATACTCTATGTTTATGTGGCATATGCGGGGAACCCACTTCAGAAGCTTAT
TGAAAGACCTATCCTCTTGTCAGAAACAATTCCAAGCTCAGTCTATGTTG
GCTTCACAGCATCCACAGGGCCCGACTTTTCAGAAAGCCATCAGGTGCTT
GATTGGACCTTCACAACGTTCCCATTGCCTTCTTCTTCTCTGGAGGAGCA
AAACCTGGCGATGCCAATATAATTCTAAACCGTCCTTGAAAAACCATGTC
ACATAAAAAATTATAATAAATAAAAATAACTAATATCGTCAATAAAGTGA
CATGGCTCTAGAAGCTGACTAAGATTAATATTGTTGGCTTGCTATCTGAG
ATGTTCTGCATGTACTTGTGTAGAAATGTCATATTCAGCT
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