CX295739

Overview
NameCX295739
Unique NameCX295739
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length680
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295739 vs. ExPASy Swiss-Prot
Match: F263_BOVIN (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 (Fragment) OS=Bos taurus GN=PFKFB3 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.008e-26
Identity = 57/100 (57.00%), Postives = 75/100 (75.00%), Query Frame = 3
Query:    3 DEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEI 302
            +EI+AGVC+ MTYEEIK   PEEY   + DK  YRYP GESY D++QRLEPVI+ELERQ   V+VI HQAV   L AYF D+  +E+P+++ PLH ++++
Sbjct:  323 NEIDAGVCEEMTYEEIKDTYPEEYALAEADKYYYRYPTGESYQDLVQRLEPVIMELERQE-NVLVICHQAVCVCLLAYFLDKSAEEMPYLKCPLHAVLKL 421          
BLAST of CX295739 vs. ExPASy Swiss-Prot
Match: F262_MOUSE (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 OS=Mus musculus GN=Pfkfb2 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.008e-26
Identity = 56/100 (56.00%), Postives = 76/100 (76.00%), Query Frame = 3
Query:    3 DEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEI 302
            +EI+AGVC+ MTY EI++  PEE+  R ++K  YRYP GESY D++QRLEPVI+ELERQ   ++VISHQAV+R L AYF D+   E+P++  PLH I ++
Sbjct:  328 NEIDAGVCEEMTYSEIEQRYPEEFALRDQEKYLYRYPGGESYQDLVQRLEPVIMELERQ-GNILVISHQAVMRCLLAYFLDKGADELPYLRCPLHIIFKL 426          
BLAST of CX295739 vs. ExPASy Swiss-Prot
Match: YIKE_SCHPO (Probable 6-phosphofructo-2-kinase PB17E12.14c OS=Schizosaccharomyces pombe GN=SPAPB17E12.14c PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.651e-24
Identity = 57/114 (50.00%), Postives = 77/114 (67.54%), Query Frame = 3
Query:    3 DEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPR--GESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEIQMGVTGVQEKRY 338
            +EI +G+CDG+TYEEIK   P+EYEARK DKL YRYP   GESYLDVI RL+ VI+E+ER +  V+VI H+ + R + AYF     ++I ++  PLHT+  I+    G    +Y
Sbjct:  345 NEICSGICDGLTYEEIKSIYPKEYEARKLDKLNYRYPGSGGESYLDVIYRLQSVIVEIERMKHHVLVIGHRVITRIIIAYFLGCRREDIAYLNVPLHTVYCIEPQPYGTDFYQY 458          
BLAST of CX295739 vs. ExPASy Swiss-Prot
Match: 6P21_YEAST (6-phosphofructo-2-kinase 1 OS=Saccharomyces cerevisiae GN=PFK26 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.816e-24
Identity = 56/99 (56.57%), Postives = 71/99 (71.72%), Query Frame = 3
Query:    3 DEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPR--GESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTI 293
            DE++AG  DGMTY EIK N PEE+E R+KDKLRYRYP   GESY+DVI RL PVI ELER    V++I+H+ V RAL  YF +  +  I +++ PLH +
Sbjct:  496 DELSAGDYDGMTYPEIKNNFPEEFEKRQKDKLRYRYPGIGGESYMDVINRLRPVITELERIEDNVLIITHRVVARALLGYFMNLSMGIIANLDVPLHCV 594          
BLAST of CX295739 vs. ExPASy Swiss-Prot
Match: YFMD_SCHPO (Probable 6-phosphofructo-2-kinase C222.13c OS=Schizosaccharomyces pombe GN=SPAC222.13c PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.642e-14
Identity = 40/115 (34.78%), Postives = 66/115 (57.39%), Query Frame = 3
Query:    3 DEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPR--GESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEIQMGVTGVQEKRYK 341
            +++N G  +G+T  E  +  P+E++  K+    YR+    GESYLDVI RL+P+I+E+ER    ++V+SH+ V   L  YF +   ++I  +  PLHT+  I+    G     Y+
Sbjct:  458 NDLNLGSREGLTLREFSEKYPDEFDVIKRKDYAYRFSGQGGESYLDVIHRLQPLIVEIERSSGNILVVSHRIVSNILMTYFLNYHPEDIIDVGLPLHTLFCIESDRYGTTCMAYR 572          
BLAST of CX295739 vs. ExPASy Swiss-Prot
Match: YL345_YEAST (Putative 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase YLR345W OS=Saccharomyces cerevisiae GN=YLR345W PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.498e-13
Identity = 32/99 (32.32%), Postives = 57/99 (57.58%), Query Frame = 3
Query:    6 EINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEI 302
            ++N G    +T ++I    P EY+   KD   +R+PR ESY D+  R+EP+++E+E     +++I+H++ LR LY Y       E+P++      ++EI
Sbjct:  393 QLNPGSIADLTDQQIMDKFPSEYKESLKDPYHFRFPRAESYHDLAVRMEPLLLEMEHTSKDILIIAHESTLRVLYGYLMACTCVELPNLNFTRDKLVEI 491          
BLAST of CX295739 vs. ExPASy Swiss-Prot
Match: YIVH_SCHPO (Putative 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase C144.17c OS=Schizosaccharomyces pombe GN=SPAC144.17c PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11
Identity = 34/93 (36.56%), Postives = 53/93 (56.99%), Query Frame = 3
Query:   66 EEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEIQMGVTGVQEKRYKL 344
            EEY     D  RYR  R ES+ D+  RLEP+I+EL R++  V++I  ++++R  Y Y+ + P K+IP +     +I E+    TG+    Y L
Sbjct:  357 EEYNLYLVDPYRYRVKRKESFYDLAVRLEPLILELGREQRDVLLIGSKSIIRVFYGYYMNVPAKDIPQLCLSSSSIYELIESSTGMTVNEYDL 449          
The following BLAST results are available for this feature:
BLAST of CX295739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
F263_BOVIN3.008e-2657.006-phosphofructo-2-kinase/fructose-2,6-biphosphatas... [more]
F262_MOUSE3.008e-2656.006-phosphofructo-2-kinase/fructose-2,6-biphosphatas... [more]
YIKE_SCHPO1.651e-2450.00Probable 6-phosphofructo-2-kinase PB17E12.14c OS=S... [more]
6P21_YEAST2.816e-2456.576-phosphofructo-2-kinase 1 OS=Saccharomyces cerevi... [more]
YFMD_SCHPO2.642e-1434.78Probable 6-phosphofructo-2-kinase C222.13c OS=Schi... [more]
YL345_YEAST8.498e-1332.32Putative 6-phosphofructo-2-kinase/fructose-2,6-bip... [more]
YIVH_SCHPO7.954e-1136.56Putative 6-phosphofructo-2-kinase/fructose-2,6-bip... [more]

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Properties
Property NameValue
Genbank descriptionC05075D05SK DroRLeaf1 Citrus clementina cDNA clone C05075D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295739 ID=CX295739; Name=CX295739; organism=Citrus clementina; type=EST; length=680bp
TTGATGAGATAAATGCTGGCGTGTGTGATGGAATGACGTATGAAGAGATT
AAGAAAAATATGCCTGAGGAGTATGAGGCTCGTAAAAAGGACAAACTGAG
GTATCGGTATCCACGTGGAGAATCTTATCTTGATGTTATCCAAAGGCTAG
AACCTGTAATAATTGAACTTGAAAGACAACGAGCACCAGTTGTAGTGATA
TCTCACCAGGCGGTGTTGAGAGCTTTATATGCTTATTTTGCTGATAGGCC
TCTCAAAGAAATTCCCCACATTGAGACGCCACTCCATACAATAATCGAAA
TACAGATGGGCGTCACAGGTGTCCAAGAGAAAAGATACAAACTCATGGAC
TAAAAATTGCTTCAACGGATTCTGAAGTTCGTCGCTTTATAACTCGATGC
GACTCAACATTTGGATGGATTGAATCGCAATTCATTACTCAACTGTGTCA
TTCATTGTTACCAATGTTAATGCTAATAACCAAAATTTTATGAAGTTGTG
GGGCAAAAGCCAAGTGCTCCTCTTACTAATTAATCACATTTCGCGGTCCT
TTTTTTCCGCTACTGTTGGGCACGTCTGGGACAGTATTGAATCTAGAGGG
TCCCAAATTCAATATGTGTATGTATTAAAATATGGAAGAAATGAATAAAG
AAATAGGAATCTGTGTTTGTGTAGTGTAGG
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