CX295741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: GLGX_PECCP (Glycogen debranching enzyme OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=glgX PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.423e-13 Identity = 36/104 (34.62%), Postives = 60/104 (57.69%), Query Frame = 1 Query: 331 QVSKGYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAK 642 ++ G PTP GA+ GVNF++FS++A LC+ E + + + L + ++GD+WH +L + YG++ DG F P +G F+P K++LDP A+ Sbjct: 3 ELQTGKPTPLGASFDGQGVNFALFSADAERVELCIF-----DERQQEQRLELTA---RSGDIWHGYLPAAQPGLRYGFRVDGPFEPSQGLRFNPHKLLLDPCAR 98
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: GLGX_MYCTU (Glycogen operon protein glgX homolog OS=Mycobacterium tuberculosis GN=glgX PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 43/109 (39.45%), Postives = 52/109 (47.71%), Query Frame = 1 Query: 343 GYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFG 669 G P GAT G NFS+FS A LCLI E+ V I LD G VWH +L YG++ G F P GH DP+K++LDPY K+ FG Sbjct: 22 GNAYPLGATYDGAGTNFSLFSEIAEKVELCLI-----DEDGVESRIPLDEV---DGYVWHAYLPNITPGQRYGFRVHGPFDPAAGHRCDPSKLLLDPYGKSFHGDFTFG 122
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: GLGX_MYCBO (Glycogen operon protein glgX homolog OS=Mycobacterium bovis GN=glgX PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 43/109 (39.45%), Postives = 52/109 (47.71%), Query Frame = 1 Query: 343 GYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFG 669 G P GAT G NFS+FS A LCLI E+ V I LD G VWH +L YG++ G F P GH DP+K++LDPY K+ FG Sbjct: 22 GNAYPLGATYDGAGTNFSLFSEIAEKVELCLI-----DEDGVESRIPLDEV---DGYVWHAYLPNITPGQRYGFRVHGPFDPAAGHRCDPSKLLLDPYGKSFHGDFTFG 122
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: GLGX_ECOUT (Glycogen debranching enzyme OS=Escherichia coli (strain UTI89 / UPEC) GN=glgX PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 37/106 (34.91%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 331 QVSKGYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAV 648 Q++ G PTP GA GVNF++FS++A LC+ + QE++ +GD+WH +L + YGY+ G + P EGH F+P K+++DP A+ + Sbjct: 3 QLAIGKPTPLGAHYDGQGVNFTLFSAHAERVELCVFDANG-QEHRY-------DLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQI 100
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: GLGX_ECOSM (Glycogen debranching enzyme OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=glgX PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 37/106 (34.91%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 331 QVSKGYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAV 648 Q++ G PTP GA GVNF++FS++A LC+ + QE++ +GD+WH +L + YGY+ G + P EGH F+P K+++DP A+ + Sbjct: 3 QLAIGKPTPLGAHYDGQGVNFTLFSAHAERVELCVFDANG-QEHRY-------DLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQI 100
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: GLGX_ECOL6 (Glycogen debranching enzyme OS=Escherichia coli O6 GN=glgX PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 37/106 (34.91%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 331 QVSKGYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAV 648 Q++ G PTP GA GVNF++FS++A LC+ + QE++ +GD+WH +L + YGY+ G + P EGH F+P K+++DP A+ + Sbjct: 3 QLAIGKPTPLGAHYDGQGVNFTLFSAHAERVELCVFDANG-QEHRY-------DLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQI 100
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: GLGX_ECOL5 (Glycogen debranching enzyme OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=glgX PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 37/106 (34.91%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 331 QVSKGYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAV 648 Q++ G PTP GA GVNF++FS++A LC+ + QE++ +GD+WH +L + YGY+ G + P EGH F+P K+++DP A+ + Sbjct: 3 QLAIGKPTPLGAHYDGQGVNFTLFSAHAERVELCVFDANG-QEHRY-------DLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQI 100
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: GLGX_ECOK1 (Glycogen debranching enzyme OS=Escherichia coli O1:K1 / APEC GN=glgX PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 37/106 (34.91%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 331 QVSKGYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAV 648 Q++ G PTP GA GVNF++FS++A LC+ + QE++ +GD+WH +L + YGY+ G + P EGH F+P K+++DP A+ + Sbjct: 3 QLAIGKPTPLGAHYDGQGVNFTLFSAHAERVELCVFDANG-QEHRY-------DLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQI 100
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: GLGX_ECO81 (Glycogen debranching enzyme OS=Escherichia coli O81 (strain ED1a) GN=glgX PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 37/106 (34.91%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 331 QVSKGYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAV 648 Q++ G PTP GA GVNF++FS++A LC+ + QE++ +GD+WH +L + YGY+ G + P EGH F+P K+++DP A+ + Sbjct: 3 QLAIGKPTPLGAHYDGQGVNFTLFSAHAERVELCVFDANG-QEHRY-------DLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQI 100
BLAST of CX295741 vs. ExPASy Swiss-Prot
Match: GLGX_ECO45 (Glycogen debranching enzyme OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=glgX PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 37/106 (34.91%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 331 QVSKGYPTPFGATLRDGGVNFSIFSSNAVSASLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAV 648 Q++ G PTP GA GVNF++FS++A LC+ + QE++ +GD+WH +L + YGY+ G + P EGH F+P K+++DP A+ + Sbjct: 3 QLAIGKPTPLGAHYDGQGVNFTLFSAHAERVELCVFDANG-QEHRY-------DLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQI 100 The following BLAST results are available for this feature:
BLAST of CX295741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295741 ID=CX295741; Name=CX295741; organism=Citrus clementina; type=EST; length=710bpback to top |