CX295752
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295752 vs. ExPASy Swiss-Prot
Match: DBP6_VANPO (ATP-dependent RNA helicase DBP6 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DBP6 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.021e-17 Identity = 65/210 (30.95%), Postives = 101/210 (48.10%), Query Frame = 2 Query: 71 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCIVFTSSVES 688 +++A S ++ KLE + E+ + LQ+ DIL+ TPGRL+DH+ + L +L +LV+DE DRLL +++Q W +L ++D ++ +VKMV SATLT + KL L ++P LF+ Y LP L+ Y L ++ KPL+L+ LL + K +VF S ES Sbjct: 281 NNLAQGTSLIVSISKLENSL---KEENKKLLQNEPDILITTPGRLVDHLQSG-AVNLRNLKFLVLDEADRLLNQSFQNWCNELLNKLKTDKQDHMPG------------------------------NIVKMVFSATLTTNTEKLHGLQFYNPKLFVMDSVKLYHLPRMLQEYNLHIPTAKTSYKPLFLLRLLSEINGSKMLVFVKSNES 456
BLAST of CX295752 vs. ExPASy Swiss-Prot
Match: DBP6_KLULA (ATP-dependent RNA helicase DBP6 OS=Kluyveromyces lactis GN=DBP6 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.801e-14 Identity = 63/215 (29.30%), Postives = 100/215 (46.51%), Query Frame = 2 Query: 71 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEE-----KCIVFTSSVES 688 S ++ S + KLE + E+ + L ++ DIL+ TPGRL+DH+ F L+ L +LV+DE DRLL +++Q W + +D + DK ++KMV SATLT + KL L LH+P +FLT Y +P++L+ + +S KPL L+ ++ + K +VF S E+ Sbjct: 281 SKLSQGTSLNVSMSKLENSL---KEEHNKFLYNSPDILIITPGRLVDHLQM-ESFDLKTLKFLVLDEADRLLNQSFQNWNQVLFHHLTNDKQ------------------------------DKRPGNVIKMVFSATLTTNAEKLYNLYLHNPKIFLTDSVKLYSIPKKLQELNVNIPTAKSLFKPLLLLRIIHDIKSSASRNAKILVFVKSNEA 461
BLAST of CX295752 vs. ExPASy Swiss-Prot
Match: DBP6_PICGU (ATP-dependent RNA helicase DBP6 OS=Pichia guilliermondii GN=DBP6 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.525e-13 Identity = 64/194 (32.99%), Postives = 91/194 (46.91%), Query Frame = 2 Query: 146 DVLQELQSAVDILVATPGRLMDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCI---VFTSSVES 688 D Q LQ DI+V+TPGRL++H+ T G L+ L YLV+DE DRLL +++Q W T+ ++R D+ T+ PS + K+V SATLT D +L+ L L P + + + +P L+ YKL S KPL L L S E+K + VF S E+ Sbjct: 313 DEAQRLQVVPDIIVSTPGRLVEHL--TNGHINLKSLRYLVIDEADRLLNQSFQNWCETL--MSRIDSNPISELDQTWRPS------------------------VQKLVFSATLTTDAGRLSMLKLQRPRLIIVNDRHELVNELFTVPATLQEYKLSLGSARSSAKPLVLAKFLMS--EQKLVNTLVFAKSNEA 476
BLAST of CX295752 vs. ExPASy Swiss-Prot
Match: DBP6_DEBHA (ATP-dependent RNA helicase DBP6 OS=Debaryomyces hansenii GN=DBP6 PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.437e-13 Identity = 58/179 (32.40%), Postives = 85/179 (47.49%), Query Frame = 2 Query: 176 DILVATPGRLMDHINATRGF-TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR------YKLPERLESYKL---ICESKLKPLYLVALLQSLGE-EKCIVFTSS 679 DI+V+TPGRL+DH+ T G+ +L++L YLV+DE DRLL +++Q W ++ F ++K ER + + KM+ SATLT D KL+ L H P + + LP L +KL +S LKPL L L S + ++FT S Sbjct: 263 DIIVSTPGRLVDHL--TNGYISLKNLQYLVIDEADRLLNQSFQNWCQILISKI----------------DEFTNIK-------ERNISNSWKLNVQKMIFSATLTTDAGKLSLLKFHKPRLIIVNNKEQLVNEMFSLPATLNEFKLQFGSAKSSLKPLILSKFLLSKNKLANVLIFTKS 416
BLAST of CX295752 vs. ExPASy Swiss-Prot
Match: HAS1_CRYNE (ATP-dependent RNA helicase HAS1 OS=Cryptococcus neoformans GN=HAS1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.906e-12 Identity = 51/180 (28.33%), Postives = 84/180 (46.67%), Query Frame = 2 Query: 158 ELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH-HPLFLTTGETR-YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESL 691 +L V+++VATPGRL+DH+ T+GF ++L LV+DE DR+L ++ + +++L S+N M+ SAT T LA++ L PL++ ET+ + LE ++CES + + L L+ ++K IVF SS S+ Sbjct: 247 KLVKGVNLIVATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEEEMKQIIKLLPSENRQ-------------------------------------SMLFSATQTTKVTDLARISLRPGPLYINVDETKEASTADMLEQGYVVCESDQRFMLLFTFLKKNLKKKVIVFFSSCNSV 389
BLAST of CX295752 vs. ExPASy Swiss-Prot
Match: RRP3_ASPNC (ATP-dependent rRNA helicase rrp3 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=rrp3 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12 Identity = 51/168 (30.36%), Postives = 75/168 (44.64%), Query Frame = 2 Query: 179 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 682 I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +L++ + TFL SAT++ L + L +PL ++ ++Y+ L L K K LYLV LL + I+FT +V Sbjct: 169 IIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKILKVLPRERR-------TFL-------------------------------FSATMSSKVESLQRASLSNPLRVSVSTSKYQTVSTLLQSYLFIPQKHKDLYLVYLLNEFAGQSTIIFTRTV 298
BLAST of CX295752 vs. ExPASy Swiss-Prot
Match: RRP3_ASPCL (ATP-dependent rRNA helicase rrp3 OS=Aspergillus clavatus GN=rrp3 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.424e-11 Identity = 52/169 (30.77%), Postives = 78/169 (46.15%), Query Frame = 2 Query: 179 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK-LPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 682 I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +L++ + TFL SAT++ L + L +PL ++ +Y+ + L+SY+ I K K +YLV LL + I+FT +V Sbjct: 174 IIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKILPRERR-------TFL-------------------------------FSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQSYRFI-PHKHKDIYLVYLLNEFVGQSAIIFTRTV 303
BLAST of CX295752 vs. ExPASy Swiss-Prot
Match: RRP3_NEOFI (ATP-dependent rRNA helicase rrp3 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=rrp3 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.084e-11 Identity = 50/168 (29.76%), Postives = 73/168 (43.45%), Query Frame = 2 Query: 179 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 682 I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +L++ + TFL SAT++ L + L +PL ++ +Y+ L L K K +YLV LL + I+FT +V Sbjct: 173 IIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKVLPRERR-------TFL-------------------------------FSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQSYLFLPHKHKDIYLVYLLNEFVGQSAIIFTRTV 302
BLAST of CX295752 vs. ExPASy Swiss-Prot
Match: RRP3_ASPFU (ATP-dependent rRNA helicase rrp3 OS=Aspergillus fumigatus GN=rrp3 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11 Identity = 50/168 (29.76%), Postives = 73/168 (43.45%), Query Frame = 2 Query: 179 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSV 682 I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +L++ + TFL SAT++ L + L +PL ++ +Y+ L L K K +YLV LL + I+FT +V Sbjct: 173 IIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKVLPRERR-------TFL-------------------------------FSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQSYLFLPHKHKDIYLVYLLNEFVGQSTIIFTRTV 302 The following BLAST results are available for this feature:
BLAST of CX295752 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295752 ID=CX295752; Name=CX295752; organism=Citrus clementina; type=EST; length=739bpback to top |