CX295756

Overview
NameCX295756
Unique NameCX295756
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THLA_STAES (Probable acetyl-CoA acyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_2384 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.276e-13
Identity = 49/150 (32.67%), Postives = 75/150 (50.00%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK 484
            ++DGAAA+++++  K   LGLQ IA +  F  +  AP      P   I KA+  +    + +D +E+NEAF+ +                             +IA  + L L  ++VN +GGA++LGHP+G SGAR LV+LL  L   K
Sbjct:  250 INDGAAAMLVMTEDKAKALGLQPIAVLDSFGASGVAPSIMGIGPVEAIHKALKRSNKVINDVDIFELNEAFAAQ-----------------------------SIAVNRELQLPQDKVNVNGGAIALGHPIGASGARTLVSLLHQLSDAK 370          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THLA_STAEQ (Probable acetyl-CoA acyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0032 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.276e-13
Identity = 49/150 (32.67%), Postives = 75/150 (50.00%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK 484
            ++DGAAA+++++  K   LGLQ IA +  F  +  AP      P   I KA+  +    + +D +E+NEAF+ +                             +IA  + L L  ++VN +GGA++LGHP+G SGAR LV+LL  L   K
Sbjct:  250 INDGAAAMLVMTEDKAKALGLQPIAVLDSFGASGVAPSIMGIGPVEAIHKALKRSNKVINDVDIFELNEAFAAQ-----------------------------SIAVNRELQLPQDKVNVNGGAIALGHPIGASGARTLVSLLHQLSDAK 370          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THLA_CLOAB (Acetyl-CoA acetyltransferase OS=Clostridium acetobutylicum GN=thlA PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.276e-13
Identity = 52/171 (30.41%), Postives = 78/171 (45.61%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKXXXXXXXXXXXXXXASALVLE 547
            ++D AA LV++S  K  ELG++ +AKI  +  A   P      P      AI  AG    ++D  E NEAF+ +                             ++A  K L  D  +VN +GGA++LGHP+G SGARILVTL+  ++ +                +A++LE
Sbjct:  249 LNDCAAVLVIMSAEKAKELGVKPLAKIVSYGSAGVDPAIMGYGPFYATKAAIEKAGWTVDELDLIESNEAFAAQ-----------------------------SLAVAKDLKFDMNKVNVNGGAIALGHPIGASGARILVTLVHAMQKRDAKKGLATLCIGGGQGTAILLE 390          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_SERP5 (3-ketoacyl-CoA thiolase OS=Serratia proteamaculans (strain 568) GN=fadA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.276e-13
Identity = 50/149 (33.56%), Postives = 74/149 (49.66%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGA+A++L+S  +   LGL+  A+IR  A     P      P      A+  AGL    ID +E+NEAF+ ++               LP            I +  LL    +++N +GGA++LGHPLGCSG+RI  TLL  +  +
Sbjct:  241 LSDGASAMLLMSESRAKALGLKARARIRSMAVVGCDPSIMGYGPVPASKLALKRAGLSVQDIDLFELNEAFAAQS---------------LP-----------CIKDLGLLDSIDDKINLNGGAIALGHPLGCSGSRISTTLLNNMERR 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIL_ZOORA (Acetyl-CoA acetyltransferase OS=Zoogloea ramigera GN=phbA PE=1 SV=4)

HSP 1 Score: 76.2554 bits (186), Expect = 1.667e-13
Identity = 49/149 (32.89%), Postives = 72/149 (48.32%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            ++DGAAA +L+S  +    G+Q + +I  +A     P+   T P     KA+  AG +   +D  E NEAF+ +                             A A  K LG DP  VN +GGA+++GHP+G SGARIL TLL  ++ +
Sbjct:  249 LNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQ-----------------------------ACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR 368          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIL_PARDE (Acetyl-CoA acetyltransferase OS=Paracoccus denitrificans GN=phaA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.843e-13
Identity = 47/143 (32.87%), Postives = 70/143 (48.95%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 463
            ++DGAAA+++++  +    GL  +A+I  +A A   P+   T P     KA+  AG     +D  E NEAF+ +                             AIA  + +G DP  VN +GGA+++GHP+G SG RIL TLL
Sbjct:  248 LNDGAAAVLVMTEDEAARRGLTPLARIASYATAGVDPQIMGTGPIPASRKALEKAGWSVGDLDLVEANEAFAAQ-----------------------------AIAVNRDMGWDPSIVNVNGGAIAIGHPIGASGCRILNTLL 361          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_PSYCK (3-ketoacyl-CoA thiolase OS=Psychrobacter cryohalolentis (strain K5) GN=fadA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.843e-13
Identity = 51/146 (34.93%), Postives = 72/146 (49.32%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 472
            +SDGA+A++++S  K  ELGL+  A+IR  A A          P     KA+  AG+    +   E+NEAF+ +             +S+L    LT    +               VN +GGA++LGHPLGCSGARI VTLL  +
Sbjct:  245 LSDGASAMLIMSAQKAKELGLKPRARIRSMAIAGCDAAIMGYGPVPATQKALKRAGMSIDDMQTIELNEAFAAQG------------LSVLKALNLTDKQDI---------------VNINGGAIALGHPLGCSGARITVTLLNAM 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_PSYA2 (3-ketoacyl-CoA thiolase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=fadA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.843e-13
Identity = 51/146 (34.93%), Postives = 72/146 (49.32%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 472
            +SDGA+A++++S  K  ELGL+  A+IR  A A          P     KA+  AG+    +   E+NEAF+ +             +S+L    LT    +               VN +GGA++LGHPLGCSGARI VTLL  +
Sbjct:  245 LSDGASAMLIMSAQKAKELGLKPRARIRSMAVAGCDAAIMGYGPVPATQKALKRAGMSIEDMQTIELNEAFAAQG------------LSVLKALNLTDKQDI---------------VNINGGAIALGHPLGCSGARITVTLLNAM 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_SHESW (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain W3-18-1) GN=fadA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.713e-13
Identity = 47/149 (31.54%), Postives = 75/149 (50.34%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGA+A++++   K   L L + A+IR  A A          P     KA+A AG+  + +D  E+NEAF+ ++               LP            + +  L  +  +++N +GGA++LGHPLGCSGARI  TL+ ++  K
Sbjct:  241 LSDGASAMLIMEESKARALSLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVADLDVIELNEAFAAQS---------------LP-----------CVKDLGLADVVDDKINLNGGAIALGHPLGCSGARISTTLINLMEDK 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_AERS4 (3-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (strain A449) GN=fadA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.713e-13
Identity = 49/149 (32.89%), Postives = 74/149 (49.66%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGA+A++++S  +   LGL    ++R  A A          P     KA+  AGL    ID  E+NEAF+ ++               LP            + +  LL +  E+VN +GGA++LGHPLGCSG+RI  TL+ ++  K
Sbjct:  241 LSDGASAMLVMSADRAKALGLTPRVRVRSMAVAGCDAAIMGYGPVPATQKALKRAGLTIGDIDLVELNEAFAAQS---------------LP-----------CVKDLGLLDVAEEKVNLNGGAIALGHPLGCSGSRISTTLIHLMEEK 363          
The following BLAST results are available for this feature:
BLAST of CX295756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
THLA_STAES1.276e-1332.67Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAEQ1.276e-1332.67Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_CLOAB1.276e-1330.41Acetyl-CoA acetyltransferase OS=Clostridium acetob... [more]
FADA_SERP51.276e-1333.563-ketoacyl-CoA thiolase OS=Serratia proteamaculans... [more]
THIL_ZOORA1.667e-1332.89Acetyl-CoA acetyltransferase OS=Zoogloea ramigera ... [more]
THIL_PARDE2.843e-1332.87Acetyl-CoA acetyltransferase OS=Paracoccus denitri... [more]
FADA_PSYCK2.843e-1334.933-ketoacyl-CoA thiolase OS=Psychrobacter cryohalol... [more]
FADA_PSYA22.843e-1334.933-ketoacyl-CoA thiolase OS=Psychrobacter arcticus ... [more]
FADA_SHESW3.713e-1331.543-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADA_AERS43.713e-1332.893-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (... [more]

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Properties
Property NameValue
Genbank descriptionC05075E11SK DroRLeaf1 Citrus clementina cDNA clone C05075E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295756 ID=CX295756; Name=CX295756; organism=Citrus clementina; type=EST; length=672bp
CTTATCAGTTTTGGGTTGTTGGTCTACTGTTGTGGTCAGTGATGGTGCAG
CAGCACTTGTACTGGTGAGTGGAGTGAAGGTGCTTGAGCTTGGTTTGCAA
GTAATAGCTAAGATTAGGGGATTTGCTGACGCAGCTCAGGCTCCAGAGTG
GTTTACAACTGCTCCATCCCTTGTAATACCAAAAGCCATAGCAAATGCTG
GCTTGGAAGCTTCTCAGATTGATTACTATGAAATAAACGAAGCTTTTTCT
GTAAGAAATCATGTTCCTACCTAGTGATGCCGCTAGTATCCAAAGGTTAG
TTTATTACCATTTCATGTTCTAACCTCCTCTTTGCAGGTTGTAGCTATTG
CCAATCAAAAACTGCTTGGTCTTGATCCTGAACAGGTTAATGCGCATGGT
GGAGCCGTATCCCTGGGTCATCCGTTAGGGTGTAGTGGAGCTCGTATCTT
GGTCACATTATTGGGGGTACTGAGACATAAGAAGGGGAAGTACGGGGTTG
GTGGCATCTGCAATGGTGGAGGGGGGGCATCCGCTCTTGTTCTTGAGCTC
ATGCAAGCGGTGCGGGTGGGACATTCCAAGCTATGAATTGATGATGTGTA
CTGACTGTGGAACATCACCTCCTGTGCTATTGTCTCTTATCTCTTTGTTA
AGTTGTCTACTTGAATGAGAAA
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