CX295756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ACIAD (3-ketoacyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=fadA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.850e-13 Identity = 55/151 (36.42%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGA+A++L+S + LGL+ A IR A A P KA+ AGL + I E+NEAF+ + +S+L K LGL +Q VN +GGA++LGHPLGCSGARI TLL V+ + Sbjct: 245 LSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSVADIQTVELNEAFAAQG------------LSVL-----------------KGLGLYEKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQ 366
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ACIBY (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AYE) GN=fadA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13 Identity = 55/151 (36.42%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGA+A++L+S + LGL+ A IR A A P KA+ AGL + I E+NEAF+ + +S+L K LGL +Q VN +GGA++LGHPLGCSGARI TLL V+ + Sbjct: 245 LSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQG------------LSVL-----------------KGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQ 366
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ACIBT (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=fadA PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13 Identity = 55/151 (36.42%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGA+A++L+S + LGL+ A IR A A P KA+ AGL + I E+NEAF+ + +S+L K LGL +Q VN +GGA++LGHPLGCSGARI TLL V+ + Sbjct: 245 LSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQG------------LSVL-----------------KGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQ 366
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ACIBS (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain SDF) GN=fadA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13 Identity = 55/151 (36.42%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGA+A++L+S + LGL+ A IR A A P KA+ AGL + I E+NEAF+ + +S+L K LGL +Q VN +GGA++LGHPLGCSGARI TLL V+ + Sbjct: 245 LSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQG------------LSVL-----------------KGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQ 366
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ACIBC (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ACICU) GN=fadA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13 Identity = 55/151 (36.42%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGA+A++L+S + LGL+ A IR A A P KA+ AGL + I E+NEAF+ + +S+L K LGL +Q VN +GGA++LGHPLGCSGARI TLL V+ + Sbjct: 245 LSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQG------------LSVL-----------------KGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQ 366
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ACIB5 (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AB0057) GN=fadA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13 Identity = 55/151 (36.42%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGA+A++L+S + LGL+ A IR A A P KA+ AGL + I E+NEAF+ + +S+L K LGL +Q VN +GGA++LGHPLGCSGARI TLL V+ + Sbjct: 245 LSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQG------------LSVL-----------------KGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQ 366
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ACIB3 (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AB307-0294) GN=fadA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13 Identity = 55/151 (36.42%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGA+A++L+S + LGL+ A IR A A P KA+ AGL + I E+NEAF+ + +S+L K LGL +Q VN +GGA++LGHPLGCSGARI TLL V+ + Sbjct: 245 LSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQG------------LSVL-----------------KGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQ 366
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_YERE8 (3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.272e-13 Identity = 47/149 (31.54%), Postives = 72/149 (48.32%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGA+A++++S + LGL A+IR A P P A+ AGL+ I +E+NEAF+ ++ + + LL ++VN +GGA++LGHPLGCSGARI TLL ++ + Sbjct: 241 LSDGASAMLIMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLKLEDIGLFELNEAFAAQS--------------------------LACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMERR 363
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_PHOLL (3-ketoacyl-CoA thiolase OS=Photorhabdus luminescens subsp. laumondii GN=fadA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.272e-13 Identity = 48/153 (31.37%), Postives = 71/153 (46.41%), Query Frame = 2 Query: 23 STVVVSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 S+ +SDGA+A+++ S LGL+ A+IR A P P A+ AGL I E+NEAF+ ++ + + LL ++VN +GGA++LGHPLGCSGARI TLL ++ + Sbjct: 237 SSSALSDGASAMLITSESYAKNLGLKPRARIRSMAAVGCDPSIMGYGPVPATQMALKKAGLVLGDIGVIELNEAFAAQS--------------------------LACLKGLNLLDSMDDKVNLNGGAIALGHPLGCSGARITTTLLNLMERR 363
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIL_THIVI (Acetyl-CoA acetyltransferase OS=Thiocystis violacea GN=phbA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.080e-12 Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 463 ++DGAA +V++ K ELGL +A++ F+ A P T P + AG + +D E NEAF+ + A++ + +G D +VN +GGA+++GHP+G SGAR+LVTLL Sbjct: 251 INDGAAMVVVMKESKAKELGLTPMARLVAFSSAGVDPAIMGTGPIPASTDCLKKAGWAPADLDLVEANEAFAAQ-----------------------------AMSVNQEMGWDLSKVNVNGGAIAIGHPIGASGARVLVTLL 364 The following BLAST results are available for this feature:
BLAST of CX295756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295756 ID=CX295756; Name=CX295756; organism=Citrus clementina; type=EST; length=672bpback to top |