CX295756

Overview
NameCX295756
Unique NameCX295756
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ACIAD (3-ketoacyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=fadA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.850e-13
Identity = 55/151 (36.42%), Postives = 75/151 (49.67%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGA+A++L+S  +   LGL+  A IR  A A          P     KA+  AGL  + I   E+NEAF+ +             +S+L                 K LGL  +Q  VN +GGA++LGHPLGCSGARI  TLL V+  +
Sbjct:  245 LSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSVADIQTVELNEAFAAQG------------LSVL-----------------KGLGLYEKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQ 366          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ACIBY (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AYE) GN=fadA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13
Identity = 55/151 (36.42%), Postives = 75/151 (49.67%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGA+A++L+S  +   LGL+  A IR  A A          P     KA+  AGL  + I   E+NEAF+ +             +S+L                 K LGL  +Q  VN +GGA++LGHPLGCSGARI  TLL V+  +
Sbjct:  245 LSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQG------------LSVL-----------------KGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQ 366          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ACIBT (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=fadA PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13
Identity = 55/151 (36.42%), Postives = 75/151 (49.67%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGA+A++L+S  +   LGL+  A IR  A A          P     KA+  AGL  + I   E+NEAF+ +             +S+L                 K LGL  +Q  VN +GGA++LGHPLGCSGARI  TLL V+  +
Sbjct:  245 LSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQG------------LSVL-----------------KGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQ 366          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ACIBS (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain SDF) GN=fadA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13
Identity = 55/151 (36.42%), Postives = 75/151 (49.67%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGA+A++L+S  +   LGL+  A IR  A A          P     KA+  AGL  + I   E+NEAF+ +             +S+L                 K LGL  +Q  VN +GGA++LGHPLGCSGARI  TLL V+  +
Sbjct:  245 LSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQG------------LSVL-----------------KGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQ 366          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ACIBC (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ACICU) GN=fadA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13
Identity = 55/151 (36.42%), Postives = 75/151 (49.67%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGA+A++L+S  +   LGL+  A IR  A A          P     KA+  AGL  + I   E+NEAF+ +             +S+L                 K LGL  +Q  VN +GGA++LGHPLGCSGARI  TLL V+  +
Sbjct:  245 LSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQG------------LSVL-----------------KGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQ 366          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ACIB5 (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AB0057) GN=fadA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13
Identity = 55/151 (36.42%), Postives = 75/151 (49.67%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGA+A++L+S  +   LGL+  A IR  A A          P     KA+  AGL  + I   E+NEAF+ +             +S+L                 K LGL  +Q  VN +GGA++LGHPLGCSGARI  TLL V+  +
Sbjct:  245 LSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQG------------LSVL-----------------KGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQ 366          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ACIB3 (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AB307-0294) GN=fadA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13
Identity = 55/151 (36.42%), Postives = 75/151 (49.67%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGA+A++L+S  +   LGL+  A IR  A A          P     KA+  AGL  + I   E+NEAF+ +             +S+L                 K LGL  +Q  VN +GGA++LGHPLGCSGARI  TLL V+  +
Sbjct:  245 LSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQG------------LSVL-----------------KGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQ 366          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_YERE8 (3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.272e-13
Identity = 47/149 (31.54%), Postives = 72/149 (48.32%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGA+A++++S  +   LGL   A+IR  A     P      P      A+  AGL+   I  +E+NEAF+ ++                          +  +    LL    ++VN +GGA++LGHPLGCSGARI  TLL ++  +
Sbjct:  241 LSDGASAMLIMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLKLEDIGLFELNEAFAAQS--------------------------LACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMERR 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_PHOLL (3-ketoacyl-CoA thiolase OS=Photorhabdus luminescens subsp. laumondii GN=fadA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.272e-13
Identity = 48/153 (31.37%), Postives = 71/153 (46.41%), Query Frame = 2
Query:   23 STVVVSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            S+  +SDGA+A+++ S      LGL+  A+IR  A     P      P      A+  AGL    I   E+NEAF+ ++                          +  +    LL    ++VN +GGA++LGHPLGCSGARI  TLL ++  +
Sbjct:  237 SSSALSDGASAMLITSESYAKNLGLKPRARIRSMAAVGCDPSIMGYGPVPATQMALKKAGLVLGDIGVIELNEAFAAQS--------------------------LACLKGLNLLDSMDDKVNLNGGAIALGHPLGCSGARITTTLLNLMERR 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIL_THIVI (Acetyl-CoA acetyltransferase OS=Thiocystis violacea GN=phbA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.080e-12
Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 463
            ++DGAA +V++   K  ELGL  +A++  F+ A   P    T P       +  AG   + +D  E NEAF+ +                             A++  + +G D  +VN +GGA+++GHP+G SGAR+LVTLL
Sbjct:  251 INDGAAMVVVMKESKAKELGLTPMARLVAFSSAGVDPAIMGTGPIPASTDCLKKAGWAPADLDLVEANEAFAAQ-----------------------------AMSVNQEMGWDLSKVNVNGGAIAIGHPIGASGARVLVTLL 364          
The following BLAST results are available for this feature:
BLAST of CX295756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
FADA_ACIAD4.850e-1336.423-ketoacyl-CoA thiolase OS=Acinetobacter sp. (stra... [more]
FADA_ACIBY6.334e-1336.423-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_ACIBT6.334e-1336.423-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_ACIBS6.334e-1336.423-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_ACIBC6.334e-1336.423-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_ACIB56.334e-1336.423-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_ACIB36.334e-1336.423-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_YERE88.272e-1331.543-ketoacyl-CoA thiolase OS=Yersinia enterocolitica... [more]
FADA_PHOLL8.272e-1331.373-ketoacyl-CoA thiolase OS=Photorhabdus luminescen... [more]
THIL_THIVI1.080e-1231.47Acetyl-CoA acetyltransferase OS=Thiocystis violace... [more]

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Properties
Property NameValue
Genbank descriptionC05075E11SK DroRLeaf1 Citrus clementina cDNA clone C05075E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295756 ID=CX295756; Name=CX295756; organism=Citrus clementina; type=EST; length=672bp
CTTATCAGTTTTGGGTTGTTGGTCTACTGTTGTGGTCAGTGATGGTGCAG
CAGCACTTGTACTGGTGAGTGGAGTGAAGGTGCTTGAGCTTGGTTTGCAA
GTAATAGCTAAGATTAGGGGATTTGCTGACGCAGCTCAGGCTCCAGAGTG
GTTTACAACTGCTCCATCCCTTGTAATACCAAAAGCCATAGCAAATGCTG
GCTTGGAAGCTTCTCAGATTGATTACTATGAAATAAACGAAGCTTTTTCT
GTAAGAAATCATGTTCCTACCTAGTGATGCCGCTAGTATCCAAAGGTTAG
TTTATTACCATTTCATGTTCTAACCTCCTCTTTGCAGGTTGTAGCTATTG
CCAATCAAAAACTGCTTGGTCTTGATCCTGAACAGGTTAATGCGCATGGT
GGAGCCGTATCCCTGGGTCATCCGTTAGGGTGTAGTGGAGCTCGTATCTT
GGTCACATTATTGGGGGTACTGAGACATAAGAAGGGGAAGTACGGGGTTG
GTGGCATCTGCAATGGTGGAGGGGGGGCATCCGCTCTTGTTCTTGAGCTC
ATGCAAGCGGTGCGGGTGGGACATTCCAAGCTATGAATTGATGATGTGTA
CTGACTGTGGAACATCACCTCCTGTGCTATTGTCTCTTATCTCTTTGTTA
AGTTGTCTACTTGAATGAGAAA
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