CX295756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: PCAF_PSESB (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas sp. (strain B13) GN=pcaF PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12 Identity = 45/141 (31.91%), Postives = 67/141 (47.52%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 457 V+DG+ AL+L S V + GL+ AK+ G A A AP P + K + L + D E+NEAF+ Q +A+ + + D +VN +GGA++LGHPLG SGAR+++T Sbjct: 256 VNDGSVALILASAEAVKKHGLKARAKVLGMASAGVAPRVMGIGPVPAVRKLLERLNLSVADFDVIELNEAFAA---------------------------QGLAVTRELGIADDDARVNPNGGAIALGHPLGASGARLVLT 369
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: PCAF_PSEPU (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas putida GN=pcaF PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12 Identity = 48/143 (33.57%), Postives = 67/143 (46.85%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 463 V+DGAAAL+L S V + GL A++ G A AP P + K G+ S D E+NEAF + Q +A+ + + D QVN +GGA++LGHPLG SGAR+++T L Sbjct: 255 VNDGAAALILASAEAVKKHGLTPRARVLGMASGGVAPRVMGIGPVPAVRKLTERLGVAVSDFDVIELNEAF---------------------------ASQGLAVLRELGVADDAPQVNPNGGAIALGHPLGMSGARLVLTAL 370
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIK_YARLI (3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica GN=POT1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 44/147 (29.93%), Postives = 69/147 (46.94%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 475 +SDGA A++L+ +LG ++AK PE P+ IP + + GL + +D +EINEAF+ + A+ + + G+D +VN GGA+++GHPLG +GAR TLL L+ Sbjct: 271 ISDGAGAVLLMRRSVAEKLGQPILAKFVHCKTVGVPPELMGIGPAYAIPAVLEDLGLTVNDVDVFEINEAFASQ-----------------------------ALFSIQHCGIDESKVNPRGGAIAIGHPLGATGARQFATLLSELK 388
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: PCAF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=pcaF PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.560e-11 Identity = 49/148 (33.11%), Postives = 70/148 (47.30%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGL--DPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 472 ++DGAAA+++ S V + L+ AKI P AP+ I K + A L Q+D E+NEAF+ + A+A + LGL D +VN +GGA++LGHPLG SGAR++ T L L Sbjct: 256 INDGAAAVLIASDEAVAQYQLKARAKIIASTTVGIEPRIMGFAPAPAIKKLLKQANLTLDQMDVIELNEAFAAQ-----------------------------ALACTRDLGLADDDARVNPNGGAIALGHPLGASGARLVTTALNQL 374
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_CHRSD (3-ketoacyl-CoA thiolase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=fadA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.560e-11 Identity = 51/152 (33.55%), Postives = 71/152 (46.71%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDP---EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +S GA+AL ++S + LGL+ +A++ A P KA+ +AGL I E+NEAF+ ++ I K LGL + VN HGGA++LGHPLGCSGARI TLL V+R + Sbjct: 245 LSVGASALAVMSYERAQALGLEPLARVVSTGVAGCDASIMGYGPVPATQKALKSAGLAIDDIQTVELNEAFAAQS-----------------------------IPVLKDLGLRERMDDAVNLHGGAIALGHPLGCSGARICTTLLNVMRQQ 367
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: CATF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=catF PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.560e-11 Identity = 49/148 (33.11%), Postives = 70/148 (47.30%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGL--DPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 472 ++DGAAA+++ S V + L+ AKI P AP+ I K + A L Q+D E+NEAF+ + A+A + LGL D +VN +GGA++LGHPLG SGAR++ T L L Sbjct: 256 INDGAAAVLIASDEAVAQYQLKARAKIIASTTVGIEPRIMGFAPAPAIKKLLKQANLTLDQMDVIELNEAFAAQ-----------------------------ALACTRDLGLADDDARVNPNGGAIALGHPLGASGARLVTTALNQL 374 The following BLAST results are available for this feature:
BLAST of CX295756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295756 ID=CX295756; Name=CX295756; organism=Citrus clementina; type=EST; length=672bpback to top |