CX295756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIKA_MOUSE (3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.935e-18 Identity = 55/149 (36.91%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 VSDGAAA++L K ELGL ++ +R +A P+ P+ IP A+ AGL + ID +EINEAF+ + A+ + LG+ E+VN GGA++LGHPLGC+GAR +VTLL L+ + Sbjct: 278 VSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQ-----------------------------AVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRR 397
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIKB_RAT (3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 3.834e-18 Identity = 55/149 (36.91%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 VSDGAAA++L K ELGL ++ +R +A P+ P+ IP A+ AGL + ID +EINEAF+ + A+ + LG+ E+VN GGA++LGHPLGC+GAR +VTLL L+ + Sbjct: 278 VSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQ-----------------------------ALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRR 397
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIKA_RAT (3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 3.834e-18 Identity = 55/149 (36.91%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 VSDGAAA++L K ELGL ++ +R +A P+ P+ IP A+ AGL + ID +EINEAF+ + A+ + LG+ E+VN GGA++LGHPLGC+GAR +VTLL L+ + Sbjct: 278 VSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQ-----------------------------ALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRR 397
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_MARMS (3-ketoacyl-CoA thiolase OS=Marinomonas sp. (strain MWYL1) GN=fadA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.834e-18 Identity = 56/149 (37.58%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGA+A++++S K ELGL IAK+R A A P P KA+ AGL + ID E+NEAF+ ++ + + + LL L ++VN +GGA++LGHPLGCSG RI TLL V+R K Sbjct: 245 LSDGASAMLMMSAKKAEELGLTPIAKVRSMAVAGCDPAIMGYGPVPATKKALKRAGLTIADIDIVELNEAFAAQS--------------------------IPVLKDLGLLDLVDDKVNLNGGAIALGHPLGCSGTRISTTLLNVMREK 367
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THL_BACSU (Acetyl-CoA acetyltransferase OS=Bacillus subtilis GN=mmgA PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17 Identity = 53/149 (35.57%), Postives = 75/149 (50.34%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 V+DGA A VL+S K ELG + +A I GF+ AP I K + GL ID +E+NEAF+ V + +K++G D E+VN +GGA++LGHP+G SGARIL+TL+ L+ + Sbjct: 250 VNDGAGAFVLMSEEKAAELGKRPLATILGFSTTGMPAHELAAAPGFAINKLLKKNGLTVQDIDLFEVNEAFAS-----------------------------VVLTCEKIVGFDLEKVNVNGGAIALGHPIGASGARILMTLVYELKRR 369
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_SACD2 (3-ketoacyl-CoA thiolase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=fadA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17 Identity = 56/149 (37.58%), Postives = 77/149 (51.68%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 ++DGA++++++S K ELGL IAKIR A A P P KA+ANAGL ID E+NEAF+ + LP + + LL ++VN +GGA++LGHP GCSG RI TLL V++ K Sbjct: 245 ITDGASSMLVMSAAKAAELGLTPIAKIRSMALAGVDPSIMGYGPVPATQKALANAGLSIEDIDVVELNEAFAAQ---------------ALP-----------VLKDLNLLDAMEDKVNLYGGAIALGHPFGCSGTRITGTLLSVMQDK 367
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_PSEOL (3-ketoacyl-CoA thiolase OS=Pseudomonas oleovorans GN=fadA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.457e-17 Identity = 54/147 (36.73%), Postives = 79/147 (53.74%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 475 ++DGA+ +V++SG + ++LG+Q +A IR A A P P KA+ AGL + ID+ E+NEAF+ + LP + + K+L E+VN HGGA++LGHP GCSGARI TLL V++ Sbjct: 245 ITDGASCMVVMSGQRAMDLGIQPLAVIRSMAVAGVDPAIMGYGPVPSTQKALKRAGLTMADIDFIELNEAFAAQ---------------ALP-----------VLKDLKVLDKMDEKVNLHGGAIALGHPFGCSGARISGTLLNVMK 365
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_PSEPU (3-ketoacyl-CoA thiolase OS=Pseudomonas putida GN=fadA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.903e-17 Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 475 ++DGA+ ++++SG + ++LG+Q +A IR A A P P KA+ AGL + ID+ E+NEAF+ + LP + + K+L E+VN HGGA++LGHP GCSGARI TLL V++ Sbjct: 245 ITDGASCMIVMSGQRAMDLGIQPLAVIRSMAVAGVDPAIMGYGPVPSTQKALKRAGLTMADIDFIELNEAFAAQ---------------ALP-----------VLKDLKVLDKMDEKVNLHGGAIALGHPFGCSGARISGTLLNVMK 365
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_PSEPK (3-ketoacyl-CoA thiolase OS=Pseudomonas putida (strain KT2440) GN=fadA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.903e-17 Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 475 ++DGA+ ++++SG + ++LG+Q +A IR A A P P KA+ AGL + ID+ E+NEAF+ + LP + + K+L E+VN HGGA++LGHP GCSGARI TLL V++ Sbjct: 245 ITDGASCMIVMSGQRAMDLGIQPLAVIRSMAVAGVDPAIMGYGPVPSTQKALKRAGLTMADIDFIELNEAFAAQ---------------ALP-----------VLKDLKVLDKMDEKVNLHGGAIALGHPFGCSGARISGTLLNVMK 365
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_PSEP1 (3-ketoacyl-CoA thiolase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=fadA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.903e-17 Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 475 ++DGA+ ++++SG + ++LG+Q +A IR A A P P KA+ AGL + ID+ E+NEAF+ + LP + + K+L E+VN HGGA++LGHP GCSGARI TLL V++ Sbjct: 245 ITDGASCMIVMSGQRAMDLGIQPLAVIRSMAVAGVDPAIMGYGPVPSTQKALKRAGLTMADIDFIELNEAFAAQ---------------ALP-----------VLKDLKVLDKMDEKVNLHGGAIALGHPFGCSGARISGTLLNVMK 365 The following BLAST results are available for this feature:
BLAST of CX295756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295756 ID=CX295756; Name=CX295756; organism=Citrus clementina; type=EST; length=672bpback to top |