CX295756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_BACSU (3-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fadA PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.611e-16 Identity = 50/148 (33.78%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 38 SDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 SDGAAA++L+ K LGL + K R FA PE P IP+A+ AGL+ I +E+NEAF+ + ++QV+ + LG+D E+VN +GGA++LGHPLGC+G ++ ++L+ ++ + Sbjct: 249 SDGAAAVMLMDREKADALGLAPLVKFRSFAVGGVPPEVMGIGPVEAIPRALKLAGLQLQDIGLFELNEAFA------------------------SQAIQVI-----RELGIDEEKVNVNGGAIALGHPLGCTGTKLTLSLIHEMKRR 367
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ALCBS (3-ketoacyl-CoA thiolase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=fadA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.611e-16 Identity = 58/149 (38.93%), Postives = 77/149 (51.68%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGA+A++++S + LGL+ AKIR A A P KA+A AGL IDY E+NEAF+ ++ LP + KLL E+VN +GGA++LGHPLGCSGARI TLL V+ K Sbjct: 245 LSDGASAMLVMSAERAQALGLKPRAKIRSMAVAGCDAAIMGYGPVPATQKALARAGLTIDDIDYVELNEAFAAQS---------------LP-----------VAKDLKLLDKMEEKVNLNGGAIALGHPLGCSGARITGTLLNVMEWK 367
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: ATOB_ECOLI (Acetyl-CoA acetyltransferase OS=Escherichia coli (strain K12) GN=atoB PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.611e-16 Identity = 54/147 (36.73%), Postives = 75/147 (51.02%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 475 ++DGAAALV++ L GL +A+I+ +A P P KA+ AGL+ + ID E NEAF+ Q +A+ K LG D E+VN +GGA++LGHP+G SGARILVTLL ++ Sbjct: 250 INDGAAALVIMEESAALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAA---------------------------QFLAVG--KNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQ 367
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_PSEMY (3-ketoacyl-CoA thiolase OS=Pseudomonas mendocina (strain ymp) GN=fadA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16 Identity = 52/147 (35.37%), Postives = 77/147 (52.38%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 475 ++DGA+ ++++S + +LG+Q +A +R A A P P KA+ AGL + ID+ E+NEAF+ + LP + + KLL E+VN HGGA++LGHP GCSGARI TLL V++ Sbjct: 245 ITDGASCMIVMSAQRAQDLGIQPMAVVRAMAVAGVDPAIMGYGPVPSTQKALKRAGLTMADIDFVELNEAFAAQ---------------ALP-----------VLKDLKLLDKMEEKVNLHGGAIALGHPFGCSGARISGTLLNVMK 365
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_PSEFR (3-ketoacyl-CoA thiolase OS=Pseudomonas fragi GN=fadA PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16 Identity = 52/147 (35.37%), Postives = 77/147 (52.38%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 475 ++DGA+ ++++S + +LGL+ +A IR A A P P KA+ AGL + ID+ E+NEAF+ + LP + + K+L E+VN HGGA++LGHP GCSGARI TLL V++ Sbjct: 245 ITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQ---------------ALP-----------VLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMK 365
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_PSEAE (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa GN=fadA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16 Identity = 53/147 (36.05%), Postives = 77/147 (52.38%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 475 ++DGA+ ++++S + +LG+Q +A IR A A P P KA+ AGL + ID+ E+NEAF+ + LP + + KLL E+VN HGGA++LGHP GCSGARI TLL V++ Sbjct: 245 ITDGASCMIVMSAQRAQDLGIQPMAVIRSMAVAGVDPAIMGYGPVPSTNKALKRAGLTIADIDFVELNEAFAAQ---------------ALP-----------VLKDLKLLDKMDEKVNLHGGAIALGHPFGCSGARISGTLLNVMK 365
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_PSEAB (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=fadA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16 Identity = 53/147 (36.05%), Postives = 77/147 (52.38%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 475 ++DGA+ ++++S + +LG+Q +A IR A A P P KA+ AGL + ID+ E+NEAF+ + LP + + KLL E+VN HGGA++LGHP GCSGARI TLL V++ Sbjct: 245 ITDGASCMIVMSAQRAQDLGIQPMAVIRSMAVAGVDPAIMGYGPVPSTNKALKRAGLTIADIDFVELNEAFAAQ---------------ALP-----------VLKDLKLLDKMDEKVNLHGGAIALGHPFGCSGARISGTLLNVMK 365
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_PSEA7 (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa (strain PA7) GN=fadA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16 Identity = 53/147 (36.05%), Postives = 77/147 (52.38%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 475 ++DGA+ ++++S + +LG+Q +A IR A A P P KA+ AGL + ID+ E+NEAF+ + LP + + KLL E+VN HGGA++LGHP GCSGARI TLL V++ Sbjct: 245 ITDGASCMIVMSAQRAQDLGIQPMAVIRSMAVAGVDPAIMGYGPVPSTNKALKRAGLTIADIDFVELNEAFAAQ---------------ALP-----------VLKDLKLLDKMDEKVNLHGGAIALGHPFGCSGARISGTLLNVMK 365
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_PSE14 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=fadA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16 Identity = 52/147 (35.37%), Postives = 77/147 (52.38%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 475 ++DGA+ ++++S + +LG+Q +A IR A A P P KA+ AGL + ID+ E+NEAF+ + LP + + K+L E+VN HGGA++LGHP GCSGARI TLL V++ Sbjct: 245 ITDGASCMIVMSAQRAQDLGIQPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLTIADIDFIELNEAFAAQ---------------ALP-----------VLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMK 365
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIC_MOUSE (Acetyl-CoA acetyltransferase, cytosolic OS=Mus musculus GN=Acat2 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16 Identity = 54/146 (36.99%), Postives = 74/146 (50.68%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 472 ++DGAAA+VL+ + L+ +A+I ++ A P P I +A+A AG +D +EINEAF+ V+ A K LGL+PE+VN GGA++LGHPLG SG RILVTLL L Sbjct: 254 MNDGAAAVVLMKKTEAERRMLKPLARIVSWSQAGVEPSVMGVGPIPAIKQAVAKAGWSLEDVDLFEINEAFAA-----------------------------VSAAIAKELGLNPEKVNIDGGAIALGHPLGASGCRILVTLLHTL 370 The following BLAST results are available for this feature:
BLAST of CX295756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295756 ID=CX295756; Name=CX295756; organism=Citrus clementina; type=EST; length=672bpback to top |