CX295756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_SALTI (3-ketoacyl-CoA thiolase OS=Salmonella typhi GN=fadA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16 Identity = 54/149 (36.24%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGAAA++++S + ELGL+ A+IR A P P A+ AGL AS ID +E+NEAF+ + +LP I + L+ E++N +GGA++LGHPLGCSGARI TL+ ++ K Sbjct: 241 LSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQ---------------ILP-----------CIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK 363
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_SALPA (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi A GN=fadA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16 Identity = 54/149 (36.24%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGAAA++++S + ELGL+ A+IR A P P A+ AGL AS ID +E+NEAF+ + +LP I + L+ E++N +GGA++LGHPLGCSGARI TL+ ++ K Sbjct: 241 LSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQ---------------ILP-----------CIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK 363
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_SALCH (3-ketoacyl-CoA thiolase OS=Salmonella choleraesuis GN=fadA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16 Identity = 54/149 (36.24%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGAAA++++S + ELGL+ A+IR A P P A+ AGL AS ID +E+NEAF+ + +LP I + L+ E++N +GGA++LGHPLGCSGARI TL+ ++ K Sbjct: 241 LSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQ---------------ILP-----------CIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK 363
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ALISL (3-ketoacyl-CoA thiolase OS=Aliivibrio salmonicida (strain LFI1238) GN=fadA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16 Identity = 53/147 (36.05%), Postives = 77/147 (52.38%), Query Frame = 2 Query: 23 STVVVSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 463 S+ +SDGA+A++++S K ELGL + AKIR A + P P KA+ AGL ID +E+NEAF+ ++ LP I + L + E++N +GGA++LGHPLGCSG+RI TL+ Sbjct: 237 SSSALSDGASAMLIMSEEKANELGLTIRAKIRSMAVSGCDPAIMGYGPVPATKKALKRAGLSIDDIDLFELNEAFAAQS---------------LP-----------CIKDLGLFDVMEEKINLNGGAIALGHPLGCSGSRIATTLI 357
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIC_RAT (Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus GN=Acat2 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16 Identity = 53/146 (36.30%), Postives = 73/146 (50.00%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 472 ++DGAAA+VL+ + L+ +A++ ++ A P P I +A+A AG +D +EINEAF+ V+ A K LGL PE+VN GGA++LGHPLG SG RILVTLL L Sbjct: 254 MNDGAAAVVLMKKTEAESRMLKPLAQVVSWSQAGVEPSVMGVGPIPAIKQAVAKAGWSLEDVDVFEINEAFAA-----------------------------VSAAIAKELGLSPEKVNIDGGAIALGHPLGASGCRILVTLLHTL 370
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_VIBVY (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus (strain YJ016) GN=fadA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16 Identity = 53/149 (35.57%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGA+A++++S K ELG+ + A+I+G A A P P KA+ AGL +D E+NEAF+ ++ LP + LL + E+VN +GGA++LGHPLGCSGARI TL+ ++ K Sbjct: 241 LSDGASAMLIMSEEKANELGVTIRARIKGMAIAGCDPSIMGYGPVPATQKALKRAGLSIEDMDVIELNEAFAAQS---------------LP-----------CAKDLGLLDVMDEKVNLNGGAIALGHPLGCSGARISTTLINLMEAK 363
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_VIBVU (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus GN=fadA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16 Identity = 53/149 (35.57%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGA+A++++S K ELG+ + A+I+G A A P P KA+ AGL +D E+NEAF+ ++ LP + LL + E+VN +GGA++LGHPLGCSGARI TL+ ++ K Sbjct: 241 LSDGASAMLIMSEEKANELGVTIRARIKGMAIAGCDPSIMGYGPVPATQKALKRAGLSIEDMDVIELNEAFAAQS---------------LP-----------CAKDLGLLDVMDEKVNLNGGAIALGHPLGCSGARISTTLINLMEAK 363
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_SHEON (3-ketoacyl-CoA thiolase OS=Shewanella oneidensis GN=fadA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16 Identity = 51/149 (34.23%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGA+A++++ K LGL + A+IR A A P KA+A AG+ + +D E+NEAF+ ++ LP + + LL + E++N +GGA++LGHPLGCSGARI TL+ ++ HK Sbjct: 241 LSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQS---------------LP-----------CVKDLGLLDVVDEKINLNGGAIALGHPLGCSGARISTTLINLMEHK 363
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ENT38 (3-ketoacyl-CoA thiolase OS=Enterobacter sp. (strain 638) GN=fadA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16 Identity = 54/149 (36.24%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGAAA++++S + ELGL A+IR A P P A+ AGL AS+ID +E+NEAF+ + +LP I + L+ E++N +GGA++LGHPLGCSGARI TL+ ++ K Sbjct: 241 LSDGAAAMLVMSESRARELGLTPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLTASEIDVFEMNEAFAAQ---------------ILP-----------CIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK 363
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_SHESR (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-7) GN=fadA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15 Identity = 51/149 (34.23%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGA+A++++ K LGL + A+IR A A P KA+A AG+ + +D E+NEAF+ ++ LP + + LL + E++N +GGA++LGHPLGCSGARI TL+ ++ HK Sbjct: 241 LSDGASAMLVMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQS---------------LP-----------CVKDLGLLDVVDEKINLNGGAIALGHPLGCSGARISTTLINLMEHK 363 The following BLAST results are available for this feature:
BLAST of CX295756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295756 ID=CX295756; Name=CX295756; organism=Citrus clementina; type=EST; length=672bpback to top |