CX295757

Overview
NameCX295757
Unique NameCX295757
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295757 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 61/200 (30.50%), Postives = 94/200 (47.00%), Query Frame = 2
Query:   41 SGCVSNGLESLDMRSSSIYGHLTDQLGQFRNLVTLNLANNSIVGPIPESFGQLSTLRELQIYDNKLN-------GTLSELHFANLTELSWFRVGGNQLTLEVKHDWIPPFQLVALGLHSCYIGSRFPLWLNSQRHLQFLDLVNSRISDIFPIRFLKSASQLKILDLEQNQIHGEMPN-LTEFTQLLFLSMDSNNMSGPLP 616
            S CV+  LE+L++ S+ I+G + DQ+ +F +L  ++ ++N + G IPE  G L  L+ L +  N L        G LSEL   +L+E S+       L  E+        +L  L LH        P        L+ LDL  + +S   P     S   L  LD+ QN++ G  P+ +    +L+ LS+ SN   G LP
Sbjct:  120 SRCVT--LETLNLSSNLIWGTIPDQISEFSSLKVIDFSSNHVEGMIPEDLGLLFNLQVLNLGSNLLTGIVPPAIGKLSELVVLDLSENSY-------LVSEIPSFLGKLDKLEQLLLHRSGFHGEIPTSFVGLTSLRTLDLSLNNLSGEIPRSLGPSLKNLVSLDVSQNKLSGSFPSGICSGKRLINLSLHSNFFEGSLP 310          
BLAST of CX295757 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 55/207 (26.57%), Postives = 99/207 (47.83%), Query Frame = 2
Query:   62 LESLDMRSSSIYGHLTDQLGQFRNLVTLNLANNSIVGPIPESFGQLSTLRELQIYDNKLNGTLSELHFANLTELSWFRVGGNQLTLEVKHDWIPPFQLVALGLHSCYIGSRFPLWLNSQRHLQFLDLVNSRISDIFPIRFLKSASQLKILDLEQNQIHGEMP-NLTEFTQLLFLSMDSNNMSGPLPL-ISSNLVYFGLSYNSFSGSI 676
            L  L + S++  G + D++G+   L  + + ++ + G +P SF  L  L +  I D +L G + +    + T+L+  R+ G  L+  +   +     L  L L     G+    ++   + L  L L N+ ++   P   +   S L+ LDL  N++HG +P +L    QL  L + +N ++G LP     +L    +SYN  SGS+
Sbjct:  172 LRLLSISSNNFSGSIPDEIGRCTKLQQIYIDSSGLSGGLPVSFANLVELEQAWIADMELTGQIPDF-IGDWTKLTTLRILGTGLSGPIPASFSNLTSLTELRLGDISNGNSSLEFIKDMKSLSILVLRNNNLTGTIPSN-IGEYSSLRQLDLSFNKLHGTIPASLFNLRQLTHLFLGNNTLNGSLPTQKGQSLSNVDVSYNDLSGSL 376          
BLAST of CX295757 vs. ExPASy Swiss-Prot
Match: Y1143_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 64/217 (29.49%), Postives = 105/217 (48.39%), Query Frame = 2
Query:   50 VSNGLESLDMRSSSIYGHLTDQLGQFRNLVTLNLANNSIVGPIPESFGQLSTLRELQIYDNKLNGTLSELHFANLTELSWFRVGGNQLTLEVKHDWIPPF--QLVALGLHSCYIGSRFPLWLNSQRHLQFLDLVNSRISDIFPIRFLKSASQLKILDLEQNQIHGEMPNLTEF-TQLLFLSMDSNNMSGPLPLISSN----LVYFGLSYNSFSGSIS 679
            +S+ L+SL++ S+ I G++  ++   +NL +L LANN   G +P+  G LS L+EL +                         GGN+L  EV    +P     L+ + L +   GS+ P  +     LQ LDL +++ +   P RFL S   L+ L L QN + G +PN +   ++L  L +  N ++G LP   S+    ++ F  +  S +GS S
Sbjct:  130 LSSSLQSLNLSSNFISGNIPKEISSLKNLRSLVLANNLFNGSVPDLRG-LSNLQELNL-------------------------GGNKLGPEV----VPSLASNLITISLKNNSFGSKIPEQIKKLNKLQSLDLSSNKFTGSIP-RFLLSLPSLQNLSLAQNLLSGSLPNSSLCNSKLRILDVSRNLLTGKLPSCFSSKKQTVLLFTFNCLSINGSPS 315          
BLAST of CX295757 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.645e-12
Identity = 57/209 (27.27%), Postives = 100/209 (47.85%), Query Frame = 2
Query:   62 LESLDMRSSSIYGHLTDQLGQFRNLVTLNLANNSIVGPIPESFGQLSTLRELQIYDNKLNGTLSELHFANLTELSWFRVGGNQLTLEVKHDWIPPFQLVALGLHSCYIGSRFPLWLNSQRHLQFLDLVNSRISDIFPIRFLKSASQLKILDLEQNQIHGEM--PNLTEFTQLLFLSMDSNNMSGPLPLISS--NLVYFGLSYNSFSGSI 676
            +  L + S ++ G+L+ +LG+   L  L+   N I G IP+  G + +L  L +  N LNG L E     L  L   ++  N+++  +   +    +     +++  I  + P  L S   +  + L N+ +S   P   L +  +L IL L+ N   G     +    ++LL +S+ + ++ GP+P +SS  NL Y  LS N  +GSI
Sbjct:   85 VSELQLFSMNLSGNLSPELGRLSRLTILSFMWNKITGSIPKEIGNIKSLELLLLNGNLLNGNLPE-ELGFLPNLDRIQIDENRISGPLPKSFANLNKTKHFHMNNNSISGQIPPELGSLPSIVHILLDNNNLSGYLPPE-LSNMPRLLILQLDNNHFDGTTIPQSYGNMSKLLKMSLRNCSLQGPVPDLSSIPNLGYLDLSQNQLNGSI 291          
BLAST of CX295757 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.645e-12
Identity = 68/234 (29.06%), Postives = 101/234 (43.16%), Query Frame = 2
Query:   23 EILDIFSGCVSNG---------LESLDMRSSSIYGHLTDQLGQFRNLVTLNLANNSIVGPIPESFGQLSTLRELQIYDNKLNGTLSELHFANLTELSWFRVGGNQLTLEVKHDWIPPFQLVALGLHSCYIGSRFPLWLNSQRHLQFLDLVNSRISDIFPIRFLKSASQLKILDLEQNQIHGEMP-NLTEFT-QLLFLSMDSNNMSGP-LPLISSN----LVYFGLSYNSFSGSI 676
            E LD+ S   S G         L+ LD+  + + G  +  +     L  LN+++N  VGPIP     L +L+ L + +NK  G + +        L+   + GN       +  +PPF        SC +             L+ L L ++  S   P+  L     LK+LDL  N+  GE+P +LT  +  LL L + SNN SGP LP +  N    L    L  N F+G I
Sbjct:  225 EFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHF-----YGAVPPF------FGSCSL-------------LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKI 432          
BLAST of CX295757 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11
Identity = 70/257 (27.24%), Postives = 105/257 (40.86%), Query Frame = 2
Query:   56 NGLESLDMRSSSIYGHLTDQLGQFRNLVTLNLANNSIVGPIPESFGQLSTLRELQIYDNKLNG----TLSELHFANLTELSWFRVGG-------------------NQLTLEVKHDWIPPFQLVALGLHSCYIGSRFPLWLNSQRHLQFLDLVNSRISDIFPIRFLKSASQLKILDLEQNQIHGEMPN---------------------LTEFTQ---LLFLSMDSNNMSGPLP---LISSNLVYFGLSYNSFSGSI 676
            + L++L + S ++ G +   LG  +NL  LNL+ N + G IP   G  S+L  L++ DN+L G     L +L      EL   R  G                   N LT E+  +     +L    L +       P  L     L+ +D + ++++   P   L    +L+IL+L  N +HG +P                      L EF+Q   L FL  +SNN  GP+P       NL    LS N F+G I
Sbjct:  291 SSLDALVIVSGNLSGTIPSSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSALGKLRKLESLELFENRFSGEIPIEIWKSQSLTQLLVYQNNLTGELPVEMTEMKKLKIATLFNNSFYGAIPPGLGVNSSLEEVDFIGNKLTGEIPPN-LCHGRKLRILNLGSNLLHGTIPASIGHCKTIRRFILRENNLSGLLPEFSQDHSLSFLDFNSNNFEGPIPGSLGSCKNLSSINLSRNRFTGQI 546          
The following BLAST results are available for this feature:
BLAST of CX295757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
Y5694_ARATH7.385e-1230.50Probably inactive leucine-rich repeat receptor-lik... [more]
Y5614_ARATH7.385e-1226.57Probable LRR receptor-like serine/threonine-protei... [more]
Y1143_ARATH7.385e-1229.49Probable LRR receptor-like serine/threonine-protei... [more]
Y1684_ARATH9.645e-1227.27Probable LRR receptor-like serine/threonine-protei... [more]
BRI1_ARATH9.645e-1229.06Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
PEPR1_ARATH2.806e-1127.24Leucine-rich repeat receptor-like protein kinase P... [more]

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Properties
Property NameValue
Genbank descriptionC05075E12SK DroRLeaf1 Citrus clementina cDNA clone C05075E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295757 ID=CX295757; Name=CX295757; organism=Citrus clementina; type=EST; length=690bp
GAGGGTGAGCCAAGAAATTTCTGAGATTTTAGATATTTTCTCGGGATGTG
TTTCTAATGGACTAGAGAGTTTAGATATGCGGAGTAGTTCAATATATGGT
CATTTGACTGATCAGCTTGGCCAATTTAGAAATCTCGTCACTCTTAATCT
TGCTAATAATTCAATTGTTGGTCCTATTCCAGAGTCATTTGGTCAACTCT
CAACCTTGAGAGAACTACAGATATATGATAATAAGTTAAACGGAACACTT
TCTGAACTTCACTTTGCCAATCTGACAGAACTGTCATGGTTCAGAGTAGG
TGGAAACCAATTGACGTTGGAAGTGAAGCATGATTGGATTCCTCCTTTCC
AACTTGTTGCATTAGGATTGCATAGTTGTTATATAGGGTCTCGATTTCCT
CTTTGGCTTAATTCACAAAGGCATTTACAGTTTCTAGATTTAGTCAACTC
AAGAATTTCAGATATTTTTCCCATTAGATTTTTGAAATCTGCTTCCCAAT
TAAAGATTTTAGATCTCGAACAAAACCAAATTCACGGGGAGATGCCAAAT
CTAACCGAGTTTACTCAACTTTTGTTTCTTTCCATGGATTCGAATAATAT
GTCTGGTCCATTACCCCTCATATCATCCAATCTCGTTTACTTTGGCCTTT
CATATAACTCATTCTCCGGGTCAATTTCTCATTTCTTGTG
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