CX295764

Overview
NameCX295764
Unique NameCX295764
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11
Identity = 45/148 (30.41%), Postives = 76/148 (51.35%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFSGEMSLKRWVNDSLPISIMNVVDQNLLSREDNHFVAKELCISSVFSLAVECTSESPDERINAKETLARLVKIRDT 450
            L E++ A++ DFG ++L+  D+    T    T+GY+ PEY   G ++ + DVYSFG++LME+ + ++     F    + K  V+     +  N + + +  +  N    +E  I     +AVECT  + +ER   KE  A L  +R T
Sbjct:  543 LDENLTAKVADFGASRLIPMDKEDLATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKAL--CFERPQTSKHIVSYFASATKENRLHEIIDGQVMNENNQRE--IQKAARIAVECTRLTGEERPGMKEVAAELEALRVT 686          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11
Identity = 46/157 (29.30%), Postives = 87/157 (55.41%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGDESMKHTQTLA-TIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPT-----DEIFSGEM---SLKRWVNDSLPISIMNVVDQNLLSREDNHFVAKELCISSVFSLAVECTSESPDERINAKETLARLVKIRDT 450
            L +DM A++ DFG+A++   D++  +T+ +  T GYM+PEY   GQ S + DVYSFG++++EI + K+ +     D   +G +   + + W N S P+ +++       S  DN+ + +   +S    +A+ C  E  ++R     T++ +V++  T
Sbjct:  484 LGDDMNAKIADFGMARIFGMDQTEANTRRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGKKNSNVYQMDGTSAGNLVTYTWRLWSNGS-PLELVDP------SFRDNYRINE---VSRCIHIALLCVQEEAEDR----PTMSAIVQMLTT 626          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.923e-11
Identity = 46/153 (30.07%), Postives = 78/153 (50.98%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFSGEMSLKRWVNDSLPISIMNVVDQN-LLSREDNHFVAKELC----ISSVFSLAVECTSESPDERINAKETLARLVKIRDT 450
            L E   A++ DFG ++ ++ D++   TQ   T GY+ PEY +  + + + DVYSFG++L+E+ T ++P+  + S E       N  L    +  V +N +L   D+    K+ C    + SV +LA  C +    +R N +E    L  IR +
Sbjct:  549 LDERNRAKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEE-------NRGLAAHFVEAVKENRVLDIVDDRI--KDECNMDQVMSVANLARRCLNRKGKKRPNMREVSIELEMIRSS 692          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.923e-11
Identity = 44/148 (29.73%), Postives = 73/148 (49.32%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFS-GEMSLKRWVNDSLP--ISIMNVVDQNLLSREDNHFVAKELCISSVFSLAVECTSESPDERINAKETLARLVKI 441
            L E++   L D G+A L    E    TQ + + GY APE+   G  + + DVY+FG++++E+ T ++P D   +  E SL RW    L    ++  +VD +L    +  + AK L  S    +   C    P+ R    E + +LV++
Sbjct:  531 LDEELNPHLSDSGLAALTPNTERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRTRAEQSLVRWATPQLHDIDALSKMVDPSL----NGMYPAKSL--SRFADIIALCIQPEPEFRPPMSEVVQQLVRL 672          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.923e-11
Identity = 42/131 (32.06%), Postives = 71/131 (54.20%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGD-ESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFSGEMSLKRWVNDSLPI-SIMNVVDQNLLSREDNHFVAKELCISSVFSLAVECTSESP 393
            L E+  A+L DFG+++   G+ ES + T    T+GY+ PE    G++  + DVYSFGI+L+E+ T  +P     SG+  + +WV   +    I+ ++D NL  R+D +  +    +    S A   +S+ P
Sbjct:  697 LDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEMIT-NQPVINQTSGDSHITQWVGFQMNRGDILEIMDPNL--RKDYNINSAWRALELAMSCAYPSSSKRP 824          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.923e-11
Identity = 41/140 (29.29%), Postives = 75/140 (53.57%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGDESMKHT-QTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPT-----DEIFSGEMSL--KRWVNDSLPISIMNVVDQNLLSREDNHFVAKELCISSVFSLAVECTSESPDER 402
            L  DM  ++ DFG+A++   D+++ +T + + T GYM+PEY   GQ S + DVYSFG++++EI + K+ +     D + +  ++   K W N SL   +   ++Q+  S E   ++           + + C  E+P +R
Sbjct:  472 LDADMNPKIADFGMARIFGVDQTVANTGRVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKSLHELLDPFINQDFTSEEVIRYI----------HIGLLCVQENPADR 601          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.923e-11
Identity = 43/152 (28.29%), Postives = 76/152 (50.00%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGDESMKHTQTLA-TIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFSGEMSLKR--------WVNDSLPISIMNV-VDQNLLSREDNHFVAKELCISSVFSLAVECTSESPDERINAKETLARL 432
            L  DM+ ++ DFG+A++   D+S+ +T+ +A T GYM PEY   GQ S + DVYSFG++++EI   K+     +  +   +         W N S P+ ++++ + +N  + E          +     +A+ C  E P +R N    +  L
Sbjct:  500 LDADMIPKIADFGMARISGIDQSVANTKRIAGTFGYMPPEYVIHGQFSMKSDVYSFGVLILEIICGKK-NRSFYQADTKAENLVTYVWRLWTNGS-PLELVDLTISENCQTEE----------VIRCIHIALLCVQEDPKDRPNLSTIMMML 639          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11
Identity = 47/146 (32.19%), Postives = 74/146 (50.68%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTD----EIFSGEMSLKRWVNDSLPISIMNVVDQNLLSREDNHFVAKELCISSVFSLAVECTSESPDERINAKETLARL 432
            L ED  A +GDFG+AKL+    +   TQ   T+G++APEY   G+ S   DV+ +GIML+E+ T +R  D    E     + L           +  +VD+NL    D  ++ +E  +  +  +A+ CT  SP++R    E +  L
Sbjct:  425 LDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLGAIVDKNL----DGEYIKEE--VEMMIQVALLCTQGSPEDRPVMSEVVRML 564          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11
Identity = 41/132 (31.06%), Postives = 69/132 (52.27%), Query Frame = 1
Query:   16 DMVARLGDFGIAKLL--SGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFSGEMSLKRWVNDSLPI-SIMNVVDQNLLSREDNHFVAKELCISSVFSLAVECTSESPDER 402
            D  A + DFG+ +L   S   S     T+ T+GY++PE    G+I+ E D+YSFGI+L+EI T KRP   +F+ +  + +WV   L    +  +++  LL  +      +E  +     + + CT+  P +R
Sbjct:  977 DFEAHISDFGLDRLTIRSPSRSAVTANTIGTLGYVSPEATLSGEITRESDIYSFGIVLLEILTGKRPV--MFTQDEDIVKWVKKQLQRGQVTELLEPGLLELDPESSEWEEFLLG--IKVGLLCTATDPLDR 1104          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11
Identity = 30/71 (42.25%), Postives = 47/71 (66.20%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDE 219
            L +DM A++ DFG+ +L    +    T+   T GY+APEY   G+++T+ DVYSFG++LME+ T ++  DE
Sbjct:  725 LGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKSLDE 795          
The following BLAST results are available for this feature:
BLAST of CX295764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
WAK4_ARATH4.059e-1130.41Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
CRK4_ARATH5.301e-1129.30Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
WAKLB_ARATH6.923e-1130.07Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
SRF8_ARATH6.923e-1129.73Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
RLK7_ARATH6.923e-1132.06Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
CRK18_ARATH6.923e-1129.29Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
CRK12_ARATH6.923e-1128.29Putative cysteine-rich receptor-like protein kinas... [more]
Y5129_ARATH9.042e-1132.19Probable LRR receptor-like serine/threonine-protei... [more]
Y4361_ARATH9.042e-1131.06Probable LRR receptor-like serine/threonine-protei... [more]
TMK1_ARATH9.042e-1142.25Probable receptor protein kinase TMK1 OS=Arabidops... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05075F07SK DroRLeaf1 Citrus clementina cDNA clone C05075F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295764 ID=CX295764; Name=CX295764; organism=Citrus clementina; type=EST; length=729bp
CGAGGGCTACATGAAGACATGGTTGCACGTTTGGGTGATTTTGGTATTGC
AAAGCTCTTAAGTGGAGATGAATCCATGAAACATACACAAACACTTGCCA
CAATAGGTTACATGGCACCAGAGTATGGAAGGGAAGGACAAATATCGACA
GAAGGTGACGTGTACAGCTTCGGAATTATGTTAATGGAAATATTTACAAG
GAAGAGACCCACGGATGAAATTTTTTCTGGAGAGATGAGCTTAAAACGTT
GGGTTAATGACTCATTACCTATTTCAATAATGAATGTTGTGGACCAAAAC
TTACTGAGTAGAGAAGACAATCATTTTGTTGCCAAGGAGCTTTGTATATC
ATCGGTGTTCAGTTTAGCTGTGGAATGCACAAGCGAATCACCTGATGAAA
GGATCAACGCAAAGGAAACTTTAGCCAGACTCGTAAAAATTAGAGACACA
CTGTTGTCGAAAGTTGAAATGGTCCCAGCATAAGTCTGTCAGTTGCTTTT
CTTGTTTTCATTGGAGGCTCGAAAACACTTTGAACCATGGCCTTGAATTA
GTTTGGAGCATTGGATACTAGAAAAGCTCATCACAAACCAAATAACGTTA
GTTGCAGTTCTGGAGGGATAGGGATTGCAAGTTGCTGAGCATCTGGGAAT
TGCAAGAGCTGCAGTTGTCGCTTTTGGACCCCGAAGCATGAAGCTTGCAC
TGTCACTTCATATTCCAAGCTTCTTTCAG
back to top