CX295766

Overview
NameCX295766
Unique NameCX295766
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.378e-31
Identity = 54/103 (52.43%), Postives = 72/103 (69.90%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            L W+ R +I +G ARGL +LH  +  ++++RD KASNILLD     +ISDFGLAKL     ++H++TRV GT GY APEY   GHL  K+DVY FGVV +E++
Sbjct:  787 LDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDD-KKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELV 888          

HSP 2 Score: 50.447 bits (119), Expect = 1.378e-31
Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 2
Query:  128 IFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEW--QGVLLFSHLHGTL 355
            IFT+ EL++AT++F     LGEGGFG V+KG L++        G V+AVK L+  S QG  ++  + V + S LH  L
Sbjct:  681 IFTYSELKSATQDFDPSNKLGEGGFGPVYKGNLND--------GRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNL 750          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.796e-31
Identity = 56/114 (49.12%), Postives = 74/114 (64.91%), Query Frame = 1
Query:  334 QPLAWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKL----GPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            QPL+  +RL+IA+G+ARG+ +LHT +D  +I+RD K SNILLD     K++DFG++KL    G    + HVTT V GT GY  PEY  +  L  KSDVY  G+V +EIL    P
Sbjct:  722 QPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRP 835          

HSP 2 Score: 50.0618 bits (118), Expect = 1.796e-31
Identity = 34/86 (39.53%), Postives = 48/86 (55.81%), Query Frame = 2
Query:  107 LPTPNLRI-----FTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEE-WQGVLLFSHLH 346
            LP P + +     + F EL +AT +F   + +G GG+GKV+KG L    PG    G V+AVK+    SLQG +E +  + L S LH
Sbjct:  606 LPKPPMNMESVKGYNFTELDSATSSFSDLSQIGRGGYGKVYKGHL----PG----GLVVAVKRAEQGSLQGQKEFFTEIELLSRLH 683          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.869e-31
Identity = 66/105 (62.86%), Postives = 79/105 (75.24%), Query Frame = 1
Query:  334 QPLAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            +PL WN R+KIA GAARGL +LH      VIYRD K SNILL   Y  K+SDFGLAK+GPS  ++HV+TRVMGTYGY AP+Y  TG L  KSD+Y FGVVL+E++
Sbjct:  197 KPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELI 301          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.604e-30
Identity = 64/102 (62.75%), Postives = 78/102 (76.47%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            L W  RL+I +GAA GL +LH  D +VIYRDFK+SN+LLD  +  K+SDFGLA+ GP    +HVTT  +GT+GYAAPEYV TGHL +KSDVY FGVVL EI+
Sbjct:  190 LPWKKRLEIMLGAAEGLTYLH--DLKVIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEII 289          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 8.683e-29
Identity = 63/111 (56.76%), Postives = 83/111 (74.77%), Query Frame = 1
Query:  331 VQPLAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            V PL W+IR+ I +G A+GLA+LH   + +V++RD K+SNILLD  + AK+SDFGLAKL  S S S+VTTRVMGT+GY APEY  TG L  KSD+Y FG++++EI+    P
Sbjct:  246 VSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSES-SYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNP 355          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.309e-28
Identity = 62/109 (56.88%), Postives = 79/109 (72.48%), Query Frame = 1
Query:  322 GASVQPLAWNIRLKIAIGAARGLAFLHTSDKQ-VIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            GA + PL+W  RL+I IGAARGL +LHT   Q +I+RD K +NILLD +  AK++DFGL+K GPS  Q+HV+T V G++GY  PEY     L  KSDVY FGVVL+E+L
Sbjct:  597 GADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVL 705          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.351e-28
Identity = 65/119 (54.62%), Postives = 83/119 (69.75%), Query Frame = 1
Query:  322 GASVQPLAWNIRLKIAIGAARGLAFLHTSD-KQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPWIQPS 675
            G+ +  L W  RL+I IGAARGL +LHT D K VI+RD K++NILLD ++ AK++DFGL+K GP   Q+HV+T V G++GY  PEY     L  KSDVY FGVVL E+L A  P I P+
Sbjct:  572 GSGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCA-RPVIDPT 689          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.600e-28
Identity = 65/109 (59.63%), Postives = 82/109 (75.23%), Query Frame = 1
Query:  325 ASVQPLAWNIRLKIAIGAARGLAFLHTSDKQ-VIYRDFKASNILLDGSYTAKISDFGLAKLGP-SASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            AS  PL+W  RL+I IGAARGL +LHT  K  +I+RD K +NILLD ++ AK+SDFGL+++GP SASQ+HV+T V GT+GY  PEY     L  KSDVY FGVVL+E+L
Sbjct:  617 ASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVL 725          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.139e-27
Identity = 61/118 (51.69%), Postives = 83/118 (70.34%), Query Frame = 1
Query:  322 GASVQPLAWNIRLKIAIGAARGLAFLHTSDKQ-VIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPWIQP 672
            G++  PL+W  RL++ IGAARGL +LHT   Q +I+RD K++NILLD +Y AK++DFGL++ GP   ++HV+T V G++GY  PEY     L  KSDVY FGVVL E+L A  P + P
Sbjct:  576 GSTNPPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLSRSGPCIDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCA-RPAVDP 692          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.223e-27
Identity = 63/119 (52.94%), Postives = 83/119 (69.75%), Query Frame = 1
Query:  322 GASVQPLAWNIRLKIAIGAARGLAFLHTSD-KQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPWIQPS 675
            G+ +  L+W  RL+I IG+ARGL +LHT D K VI+RD K++NILLD +  AK++DFGL+K GP   Q+HV+T V G++GY  PEY     L  KSDVY FGVV+ E+L A  P I P+
Sbjct:  569 GSGLLSLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCA-RPVIDPT 686          
The following BLAST results are available for this feature:
BLAST of CX295766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
Y1561_ARATH1.378e-3152.43Probable LRR receptor-like serine/threonine-protei... [more]
Y5374_ARATH1.796e-3149.12Probable LRR receptor-like serine/threonine-protei... [more]
RLCK7_ARATH1.869e-3162.86Probable serine/threonine-protein kinase RLCKVII O... [more]
Y5707_ARATH4.604e-3062.75Probable receptor-like protein kinase At5g47070 OS... [more]
Y1154_ARATH8.683e-2956.76Probable serine/threonine-protein kinase At1g01540... [more]
THE1_ARATH4.309e-2856.88Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
HERK_ARATH7.351e-2854.62Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
Y5389_ARATH9.600e-2859.63Probable receptor-like protein kinase At5g38990 OS... [more]
Y5241_ARATH2.139e-2751.69Probable receptor-like protein kinase At5g24010 OS... [more]
Y5597_ARATH6.223e-2752.94Probable receptor-like protein kinase At5g59700 OS... [more]

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Properties
Property NameValue
Genbank descriptionC05075F09SK DroRLeaf1 Citrus clementina cDNA clone C05075F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295766 ID=CX295766; Name=CX295766; organism=Citrus clementina; type=EST; length=688bp
AACCAGTCAGACAACGTCTACTGGGGTTTCTCGCGGCAGCAATGTCTCTG
GTAACAGCCGTTTCTCTGCATCGAGTGGGGATGAGTCTTATCCCAATGGG
CAGATCTTGCCCACCCCAAACTTGAGGATCTTCACTTTTGTAGAGCTGAG
GGCGGCAACAAGGAACTTTAAAAGTGATACCGTGCTTGGTGAGGGAGGTT
TCGGGAAGGTCTTCAAAGGTTGGCTGGATGAGAAAGCACCTGGGAAAAGT
GGAAGTGGTACTGTAATTGCTGTCAAAAAATTGAATTCTGAGAGCTTGCA
AGGTTTTGAGGAATGGCAGGGGGTGCTTCTGTTCAGCCACTTGCATGGAA
CATTAGACTTAAGATTGCCATCGGAGCAGCTAGAGGCTTGGCTTTTTTGC
ATACATCAGATAAGCAAGTTATCTACAGAGATTTCAAAGCATCAAACATA
CTGCTTGATGGGTCCTACACTGCCAAGATCTCAGATTTTGGCTTGGCAAA
ATTGGGTCCTTCAGCTAGTCAGTCTCATGTGACTACCCGAGTTATGGGCA
CATATGGTTATGCTGCTCCTGAGTATGTTGCCACAGGACACTTGTATGTG
AAGAGTGATGTGTATGGTTTTGGGGTTGTTTTGGTAGAGATACTACAGGC
TTACGAGCCCTGGATACAACCGTCCAGTGGTCACATAT
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