CX295766

Overview
NameCX295766
Unique NameCX295766
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: IRAK1_MOUSE (Interleukin-1 receptor-associated kinase 1 OS=Mus musculus GN=Irak1 PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 49/110 (44.55%), Postives = 64/110 (58.18%), Query Frame = 1
Query:  337 PLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKL----GPSASQSHV---TTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            PL+W  RL I +G AR + FLH     +I+ D K+SN+LLD     K+ DFGLA+     G  ASQS     T+ V GT  Y   EY+ TG L V +D + FGVV++E L
Sbjct:  309 PLSWPQRLDILLGTARAIQFLHQDSPSLIHGDIKSSNVLLDERLMPKLGDFGLARFSRFAGAKASQSSTVARTSTVRGTLAYLPEEYIKTGRLAVDTDTFSFGVVILETL 418          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: IRAK1_BOVIN (Interleukin-1 receptor-associated kinase 1 OS=Bos taurus GN=IRAK1 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 51/110 (46.36%), Postives = 63/110 (57.27%), Query Frame = 1
Query:  337 PLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKL------GPSASQSHVTTR-VMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            PL+W  RL I +G AR + FLH     +I+ D K+SN+LLD     K+ DFGLA+L       P  S S   TR V GT  Y   EYV TG L V +D + FGVVL+E L
Sbjct:  309 PLSWPQRLDILLGTARAIQFLHQDSPSLIHGDVKSSNVLLDERLMPKLGDFGLARLSRFTGANPGQSSSVARTRTVRGTLAYLPEEYVKTGRLAVDTDTFSFGVVLLETL 418          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17
Identity = 47/117 (40.17%), Postives = 68/117 (58.12%), Query Frame = 1
Query:  313 MAGGASVQPLAWNIRLKIAIGAARGLAFLHTSD-KQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            +A     + L W  R+ +  G A  L+++H      +++RD  + NILLD  YTAKISDFG AKL  + S +   + V GTYGY APE+  T  +  K DVY FGV+++E++    P
Sbjct:  941 LANDEEAKRLTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTDSSN--WSAVAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHP 1055          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17
Identity = 49/108 (45.37%), Postives = 68/108 (62.96%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            L+WN R +IA G A GL +LH   +K VI+RD K SN+L+D     ++ DFGLA+L    + S  TT ++GT GY APE    G+    SDV+ FGV+L+EI+   +P
Sbjct:  463 LSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLSE-TTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKP 569          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17
Identity = 45/103 (43.69%), Postives = 61/103 (59.22%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTSDK-QVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            L W  R  I  G  RG+ +LH   +  +I+RD KASNILLD     KI+DFG+A++         T ++ GT GY  PEYV  G    +SDVY FGV+++EI+
Sbjct:  430 LDWTKRYNIIRGITRGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGIDQSGANTKKIAGTRGYMPPEYVRQGQFSTRSDVYSFGVLVLEII 532          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.470e-17
Identity = 48/103 (46.60%), Postives = 65/103 (63.11%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTSDKQ-VIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            L W  R  IA+G A+GLA+LH    + VI+ D K  NILLD ++  KI+DFGL KL      +   + V GT GY APE+V++  +  K DVY +GVVL+E+L
Sbjct:  627 LDWEGRFNIALGVAKGLAYLHHECLEWVIHCDVKPENILLDQAFEPKITDFGLVKLLNRGGSTQNVSHVRGTLGYIAPEWVSSLPITAKVDVYSYGVVLLELL 729          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.838e-17
Identity = 46/103 (44.66%), Postives = 69/103 (66.99%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            L+WN+R++IA+ AA+ L +LH   D   I+R+FK++NILLD      +SD GLA L  S + S ++ +++  YGY APE+   G   +K DVY FGVV++E+L
Sbjct:  575 LSWNVRVRIALEAAKALEYLHEICDPPSIHRNFKSANILLDDDIRVHVSDCGLAPLISSGAVSQLSGQLLAAYGYGAPEF-EYGIYTMKCDVYSFGVVMLELL 676          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.301e-16
Identity = 46/103 (44.66%), Postives = 61/103 (59.22%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTSDK-QVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            L W  R KI  G A+G+  LH   +  +IYRDFKASNILLD     KISDFG+A +         T  +  T+ Y +PEY   G   +KSDVY FG++++EI+
Sbjct:  447 LDWTRRYKIIGGIAQGILHLHQDPQLTIIYRDFKASNILLDADMNPKISDFGMATVFGMEESRGNTNWIAETFVYMSPEYAVHGKFSMKSDVYSFGILILEII 549          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.218e-16
Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = 1
Query:  334 QPLAWNIRLKIAIGAARGLAFLH-TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPW 663
            +PL WN R+KIA+G AR L +LH      +++++ K++NILLD      +SD GLA   P+A++           GY+APE   +G   +KSDVY FGVV++E+L   +P+
Sbjct:  514 KPLIWNPRVKIALGTARALEYLHEVCSPSIVHKNIKSANILLDSELNPHLSDSGLASFLPTANE----LLNQNDEGYSAPETSMSGQYSLKSDVYSFGVVMLELLTGRKPF 620          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.897e-16
Identity = 50/117 (42.74%), Postives = 69/117 (58.97%), Query Frame = 1
Query:  319 GGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASN-ILLDGSYTAKISDFGLAKLGPS--ASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            GG     L W  R  I +GAA+GLA+LH   +      F +SN ILLD  + A+I+D+GLAKL  S  ++ S      +G  GY APEY +T    +K DVYGFG+VL+E++   +P
Sbjct:  388 GGLCDAVLDWPTRRAIGVGAAKGLAWLHHGCQPPYLHQFISSNVILLDDDFDARITDYGLAKLVGSRDSNDSSFNNGDLGELGYVAPEYSSTMVASLKGDVYGFGIVLLELVTGQKP 504          
The following BLAST results are available for this feature:
BLAST of CX295766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
IRAK1_MOUSE1.536e-1744.55Interleukin-1 receptor-associated kinase 1 OS=Mus ... [more]
IRAK1_BOVIN1.536e-1746.36Interleukin-1 receptor-associated kinase 1 OS=Bos ... [more]
Y1571_ARATH2.006e-1740.17Probable leucine-rich repeat receptor-like protein... [more]
LRKA1_ARATH2.006e-1745.37Lectin-domain containing receptor kinase A4.1 OS=A... [more]
CRK14_ARATH2.620e-1743.69Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
KPRO_MAIZE4.470e-1746.60Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
SRF1_ARATH5.838e-1744.66Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
CRK22_ARATH1.301e-1644.66Cysteine-rich receptor-like protein kinase 22 OS=A... [more]
SRF7_ARATH2.218e-1640.54Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
Y1719_ARATH2.897e-1642.74Probable inactive receptor kinase At1g27190 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC05075F09SK DroRLeaf1 Citrus clementina cDNA clone C05075F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295766 ID=CX295766; Name=CX295766; organism=Citrus clementina; type=EST; length=688bp
AACCAGTCAGACAACGTCTACTGGGGTTTCTCGCGGCAGCAATGTCTCTG
GTAACAGCCGTTTCTCTGCATCGAGTGGGGATGAGTCTTATCCCAATGGG
CAGATCTTGCCCACCCCAAACTTGAGGATCTTCACTTTTGTAGAGCTGAG
GGCGGCAACAAGGAACTTTAAAAGTGATACCGTGCTTGGTGAGGGAGGTT
TCGGGAAGGTCTTCAAAGGTTGGCTGGATGAGAAAGCACCTGGGAAAAGT
GGAAGTGGTACTGTAATTGCTGTCAAAAAATTGAATTCTGAGAGCTTGCA
AGGTTTTGAGGAATGGCAGGGGGTGCTTCTGTTCAGCCACTTGCATGGAA
CATTAGACTTAAGATTGCCATCGGAGCAGCTAGAGGCTTGGCTTTTTTGC
ATACATCAGATAAGCAAGTTATCTACAGAGATTTCAAAGCATCAAACATA
CTGCTTGATGGGTCCTACACTGCCAAGATCTCAGATTTTGGCTTGGCAAA
ATTGGGTCCTTCAGCTAGTCAGTCTCATGTGACTACCCGAGTTATGGGCA
CATATGGTTATGCTGCTCCTGAGTATGTTGCCACAGGACACTTGTATGTG
AAGAGTGATGTGTATGGTTTTGGGGTTGTTTTGGTAGAGATACTACAGGC
TTACGAGCCCTGGATACAACCGTCCAGTGGTCACATAT
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