CX295766

Overview
NameCX295766
Unique NameCX295766
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.223e-27
Identity = 60/108 (55.56%), Postives = 79/108 (73.15%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            L W  R+KI  G A+ LA+LH + + +V++RD KASNIL+D  + AK+SDFGLAKL  S  +SH+TTRVMGT+GY APEY  TG L  KSD+Y FGV+L+E +   +P
Sbjct:  278 LTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSG-ESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDP 384          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.127e-27
Identity = 62/105 (59.05%), Postives = 79/105 (75.24%), Query Frame = 1
Query:  337 PLAWNIRLKIAIGAARGLAFLHTSDKQ-VIYRDFKASNILLDGSYTAKISDFGLAKLGP-SASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            PL+W  RL+I IGAARGL +LHT  K  +I+RD K +NILLD ++  K+SDFGL+++GP SASQ+HV+T V GT+GY  PEY     L  KSDVY FGVVL+E+L
Sbjct:  614 PLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVL 718          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.171e-26
Identity = 50/109 (45.87%), Postives = 73/109 (66.97%), Query Frame = 1
Query:  337 PLAWNIRLKIAIGAARGLAFLHTSDKQVIY-RDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            P++W +RL IA   A  L++LH++    IY RD K++NILLD  + AK+SDFG+++   +   +H+TT V GT GY  PEY+ + H   KSDVY FGV+L+E+L   +P
Sbjct:  483 PMSWEVRLCIACEVADALSYLHSAVSIPIYHRDVKSTNILLDEKHRAKVSDFGISR-SVAIDDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKP 590          

HSP 2 Score: 41.5874 bits (96), Expect = 1.171e-26
Identity = 23/75 (30.67%), Postives = 42/75 (56.00%), Query Frame = 2
Query:  125 RIFTFVELRAATRNFKSDTVLGEGGFGKVFKGWLDEKAPGKSGSGTVIAVKKLNSESLQGFEEW-QGVLLFSHLH 346
            ++F+  +L  AT  F +  +LG+GG G V+KG L++        G ++AVKK  +   +  EE+   ++L S ++
Sbjct:  376 KVFSSNDLENATDRFNASRILGQGGQGTVYKGMLED--------GMIVAVKKSKALKEENLEEFINEIILLSQIN 442          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.386e-26
Identity = 64/113 (56.64%), Postives = 79/113 (69.91%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTSDKQ-VIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPWIQPS 675
            L W  RL+IAIGAARGL +LHT  K  +I+RD K +NILLD ++ AK+SDFGL+K GP+ +  HVTT V G++GY  PEY     L  KSDVY FGVVL E+L A  P + PS
Sbjct:  614 LTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCA-RPALNPS 725          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.811e-26
Identity = 62/118 (52.54%), Postives = 83/118 (70.34%), Query Frame = 1
Query:  310 GMAGGASVQPLAWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            G++G   V+ L W  RLKIA+G+ +GLA+LH  +D  +I+RD K++NILLD   TAK++DFGL+KL     ++HVTT+V GT GY  PEY  T  L  KSDVYGFGVV++E+L    P
Sbjct:  718 GLSGKNGVK-LDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSP 834          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.811e-26
Identity = 59/113 (52.21%), Postives = 82/113 (72.57%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPWIQPS 675
            L+W  RL+I +GAARGL +LHT S + +I+RD K++NILLD ++ AK++DFGL+K GP   Q+HV+T V G++GY  PEY+    L  KSDVY FGVV++E++    P I PS
Sbjct:  581 LSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVV-CGRPVIDPS 692          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.365e-26
Identity = 59/111 (53.15%), Postives = 80/111 (72.07%), Query Frame = 1
Query:  322 GASVQPLAWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQA 651
            G+++ PL+W  RL+  IG+ARGL +LHT S++ +I+RD K +NILLD ++ AK+SDFGL+K GPS   +HV+T V G++GY  PEY     L  KSDVY FGVVL E + A
Sbjct:  607 GSNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCA 717          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.365e-26
Identity = 64/113 (56.64%), Postives = 79/113 (69.91%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTSDKQ-VIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPWIQPS 675
            L W  RL+IAIGAARGL +LHT  K  +I+RD K +NIL+D ++ AK+SDFGL+K GP+ +  HVTT V G++GY  PEY     L  KSDVY FGVVL EIL A  P + PS
Sbjct:  610 LTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILVDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEILCA-RPALNPS 721          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.268e-26
Identity = 61/115 (53.04%), Postives = 78/115 (67.83%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPWIQPSSG 681
            LAW +R +IA+G ARGLA+LH  +   +I+RD KASNILLD  + AK++DFGLAK  P    +H++TRV GT GY APEY   G L  KSDVY FGVVL+E+L   +  +    G
Sbjct:  381 LAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEG-MTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEG 494          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.174e-25
Identity = 60/111 (54.05%), Postives = 79/111 (71.17%), Query Frame = 1
Query:  331 VQPLAWNIRLKIAIGAARGLAFLHTSD-KQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            ++ L W+ RLKIA+GAARGLAFLH      +I+RD KASNILLDG +  K++DFGLA+L  SA +SHV+T + GT+GY  PEY  +     K DVY FGV+L+E++   EP
Sbjct: 1009 LEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARL-ISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEP 1118          
The following BLAST results are available for this feature:
BLAST of CX295766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
Y2296_ARATH6.223e-2755.56Probable receptor-like protein kinase At2g42960 OS... [more]
Y5900_ARATH8.127e-2759.05Putative receptor-like protein kinase At5g39000 OS... [more]
WAKLG_ARATH1.171e-2645.87Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
ANX2_ARATH1.386e-2656.64Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
Y5977_ARATH1.811e-2652.54Probable leucine-rich repeat receptor-like protein... [more]
Y2393_ARATH1.811e-2652.21Probable receptor-like protein kinase At2g39360 OS... [more]
Y1357_ARATH2.365e-2653.15Probable receptor-like protein kinase At1g30570 OS... [more]
ANX1_ARATH2.365e-2656.64Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
RKF3_ARATH5.268e-2653.04Probable LRR receptor-like serine/threonine-protei... [more]
EXS_ARATH1.174e-2554.05Leucine-rich repeat receptor protein kinase EXS OS... [more]

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Properties
Property NameValue
Genbank descriptionC05075F09SK DroRLeaf1 Citrus clementina cDNA clone C05075F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295766 ID=CX295766; Name=CX295766; organism=Citrus clementina; type=EST; length=688bp
AACCAGTCAGACAACGTCTACTGGGGTTTCTCGCGGCAGCAATGTCTCTG
GTAACAGCCGTTTCTCTGCATCGAGTGGGGATGAGTCTTATCCCAATGGG
CAGATCTTGCCCACCCCAAACTTGAGGATCTTCACTTTTGTAGAGCTGAG
GGCGGCAACAAGGAACTTTAAAAGTGATACCGTGCTTGGTGAGGGAGGTT
TCGGGAAGGTCTTCAAAGGTTGGCTGGATGAGAAAGCACCTGGGAAAAGT
GGAAGTGGTACTGTAATTGCTGTCAAAAAATTGAATTCTGAGAGCTTGCA
AGGTTTTGAGGAATGGCAGGGGGTGCTTCTGTTCAGCCACTTGCATGGAA
CATTAGACTTAAGATTGCCATCGGAGCAGCTAGAGGCTTGGCTTTTTTGC
ATACATCAGATAAGCAAGTTATCTACAGAGATTTCAAAGCATCAAACATA
CTGCTTGATGGGTCCTACACTGCCAAGATCTCAGATTTTGGCTTGGCAAA
ATTGGGTCCTTCAGCTAGTCAGTCTCATGTGACTACCCGAGTTATGGGCA
CATATGGTTATGCTGCTCCTGAGTATGTTGCCACAGGACACTTGTATGTG
AAGAGTGATGTGTATGGTTTTGGGGTTGTTTTGGTAGAGATACTACAGGC
TTACGAGCCCTGGATACAACCGTCCAGTGGTCACATAT
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