CX295766

Overview
NameCX295766
Unique NameCX295766
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y5005_ARATH (Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana GN=At5g20050 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.784e-16
Identity = 46/113 (40.71%), Postives = 73/113 (64.60%), Query Frame = 1
Query:  310 GMAGGASVQPLAWNIRLKIAIGAARGLAFLHTSDK-QVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            G +GG     L+W  R ++AI  A+ LA+LH   + ++++ D K  NILLD ++ A ++DFGL+KL  +  +S V T + GT GY APE++    +  KSDVY +G+VL+E++
Sbjct:  198 GRSGGGC---LSWEQRYQVAIDVAKALAYLHHDCRSKILHLDVKPENILLDENFRAVVTDFGLSKL-IARDESRVLTDIRGTRGYLAPEWLLEHGISEKSDVYSYGIVLLEMI 306          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.784e-16
Identity = 46/114 (40.35%), Postives = 73/114 (64.04%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPWIQPSSG 681
            + W  R+KIA G +RGLA LH S++ +I+ +  ASNILLD    A I+D+GL++L  +A+ ++V     GT GY APE+    +   K+DVY  G++++E+L    P  +P++G
Sbjct:  632 IPWETRMKIAKGISRGLAHLH-SNENMIHENLTASNILLDEQTNAHIADYGLSRLMTAAAATNVIATA-GTLGYRAPEFSKIKNASAKTDVYSLGIIILELLTGKSPG-EPTNG 742          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: CCR35_ARATH (Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana GN=At3g51990 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.784e-16
Identity = 40/101 (39.60%), Postives = 64/101 (63.37%), Query Frame = 1
Query:  343 AWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            +W+ R+KIA+  A+ +  LH+ +  +I+RD K++N+L+D +  AK+ DFGLA       Q   +T   GT GY  P+YV    L  K+DV+ FG++L+EI+
Sbjct:  156 SWSKRIKIALQIAKAVHLLHSQETPIIHRDIKSANVLMDKNLNAKLGDFGLAIRCNVDDQKVKSTPPAGTMGYLDPDYVTADRLSTKTDVFSFGILLLEII 256          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.942e-16
Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 1
Query:  337 PLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            PL W  R  IA+GAAR +++LH+ D    + + K+SNILL  SY AK+SD+GLA   P  S +    R+    GY APE      +  K+DVY FGV+++E+L    P
Sbjct:  439 PLNWETRAGIALGAARAISYLHSRDGTTSHGNIKSSNILLSDSYEAKVSDYGLA---PIISSTSAPNRI---DGYRAPEITDARKISQKADVYSFGVLILELLTGKSP 540          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.454e-16
Identity = 45/106 (42.45%), Postives = 68/106 (64.15%), Query Frame = 1
Query:  346 WNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASN-ILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            W  R+++A+GAARGLA+LH   + +    + +SN ILLD  + A++ D+GL KL  S+  S  ++   G +GY APEY +T    +  DVYGFG+VL+EI+   +P
Sbjct:  387 WPTRVRVAVGAARGLAWLHHGCQPLYMHQYISSNVILLDEDFDARVIDYGLGKL-VSSQDSKDSSFSNGKFGYVAPEYSSTMVASLSGDVYGFGIVLLEIVTGQKP 491          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.454e-16
Identity = 48/108 (44.44%), Postives = 65/108 (60.19%), Query Frame = 1
Query:  334 QPLAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQS---HVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            +PL+W +RL+IAIG AR L +LH+S    + + D KA+NILLD   T +I+D GLA L P  S S     +   +   GY APE+   G    KSD Y  GV+L+E+L
Sbjct:  508 KPLSWGLRLRIAIGVARALDYLHSSFCPPIAHSDLKATNILLDEELTPRIADCGLASLRPLTSNSVKLRASEIAIQNTGYIAPEHGQPGSSGTKSDTYALGVLLLELL 615          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.430e-16
Identity = 44/111 (39.64%), Postives = 68/111 (61.26%), Query Frame = 1
Query:  334 QPLAWNIRLKIAIGAARGLAFLH-TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPW 663
            +PL WN R++IA+G A+ + +LH T    +++++ K+SNILLD     ++SD+GLA         H T++ +G  GY APE         KSDVY FGVV++E+L   +P+
Sbjct:  510 KPLTWNTRIRIALGTAKAIEYLHETCSPPLVHKNIKSSNILLDNELNPRLSDYGLANF------HHRTSQNLGV-GYNAPECTDPSAYTQKSDVYSFGVVMLELLTGRKPY 613          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: YR826_MIMIV (Putative serine/threonine-protein kinase/receptor R826 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R826 PE=4 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.101e-15
Identity = 42/109 (38.53%), Postives = 69/109 (63.30%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPWI 666
            L W+ ++KI +  A+G+++LH+ D  +I+RD K SNIL+D ++  KI+DFG A++     ++ + TR  GT  + APE +       K DV+ FG+V+ E+L   EP+I
Sbjct: 1492 LEWHQKIKILVNIAKGISYLHSFDPPIIHRDIKPSNILIDENWNVKIADFGFARI---KEENAIMTR-CGTPCWTAPEIIRNDIYDEKVDVFSFGIVMWEVLTCKEPFI 1596          

HSP 2 Score: 72.4034 bits (176), Expect = 2.538e-12
Identity = 45/141 (31.91%), Postives = 76/141 (53.90%), Query Frame = 1
Query:  271 CQKIEF*ELARF*GMAGGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHL--YVKSDVYGFGVVLVEILQAYEPWIQPSSGHI 687
            C  +EF  L     +     +  + + +++KIA  A++G+ FLH+S   + +RD K+ N+LLD  +  K+SDFGL K   S  +S    +  GT  + APE ++      Y+ SDVY FG+++ E++   +P+   S   I
Sbjct:  858 CIVMEFMALGSLHDLLKNELIPDIPFALKVKIAYQASKGMHFLHSSG--ITHRDLKSLNLLLDIKWNVKVSDFGLTKF-KSDVKSINPEKFAGTIQWTAPEILSEDREVDYILSDVYSFGIIMWELITRDQPYFGMSPAAI 995          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.453e-15
Identity = 44/109 (40.37%), Postives = 66/109 (60.55%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLH-TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPW 663
            L WN R+KIA+G AR L +LH      ++ ++ K++NILLD      +SD GLA   P+A++    T      GY+APE   +G   +KSD+Y FGVV++E+L   +P+
Sbjct:  513 LVWNSRVKIALGTARALEYLHEVCSPSIVDKNIKSANILLDSELNPHLSDSGLASFLPTANELLNQT----DEGYSAPEVSMSGQYSLKSDIYSFGVVMLELLTGRKPF 617          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.203e-15
Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 1
Query:  322 GASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            G+   PL W  R  IA+GAAR +++LH+ D    + + K+SNILL  S+ AK+SD+ LA   P  S +    R+    GY APE      +  K+DVY FGV+++E+L    P
Sbjct:  432 GSGRSPLNWETRANIALGAARAISYLHSRDATTSHGNIKSSNILLSESFEAKVSDYCLA---PMISPTSTPNRI---DGYRAPEVTDARKISQKADVYSFGVLILELLTGKSP 538          
The following BLAST results are available for this feature:
BLAST of CX295766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
Y5005_ARATH3.784e-1640.71Probable receptor-like protein kinase At5g20050 OS... [more]
IMK2_ARATH3.784e-1640.35Probably inactive leucine-rich repeat receptor-lik... [more]
CCR35_ARATH3.784e-1639.60Serine/threonine-protein kinase-like protein At3g5... [more]
Y3288_ARATH4.942e-1642.59Probable inactive receptor kinase At3g02880 OS=Ara... [more]
Y1699_ARATH6.454e-1642.45Probable LRR receptor-like serine/threonine-protei... [more]
SRF2_ARATH6.454e-1644.44Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsi... [more]
SRF4_ARATH8.430e-1639.64Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]
YR826_MIMIV1.101e-1538.53Putative serine/threonine-protein kinase/receptor ... [more]
SRF6_ARATH2.453e-1540.37Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
Y5659_ARATH3.203e-1539.82Probable inactive receptor kinase At5g16590 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC05075F09SK DroRLeaf1 Citrus clementina cDNA clone C05075F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295766 ID=CX295766; Name=CX295766; organism=Citrus clementina; type=EST; length=688bp
AACCAGTCAGACAACGTCTACTGGGGTTTCTCGCGGCAGCAATGTCTCTG
GTAACAGCCGTTTCTCTGCATCGAGTGGGGATGAGTCTTATCCCAATGGG
CAGATCTTGCCCACCCCAAACTTGAGGATCTTCACTTTTGTAGAGCTGAG
GGCGGCAACAAGGAACTTTAAAAGTGATACCGTGCTTGGTGAGGGAGGTT
TCGGGAAGGTCTTCAAAGGTTGGCTGGATGAGAAAGCACCTGGGAAAAGT
GGAAGTGGTACTGTAATTGCTGTCAAAAAATTGAATTCTGAGAGCTTGCA
AGGTTTTGAGGAATGGCAGGGGGTGCTTCTGTTCAGCCACTTGCATGGAA
CATTAGACTTAAGATTGCCATCGGAGCAGCTAGAGGCTTGGCTTTTTTGC
ATACATCAGATAAGCAAGTTATCTACAGAGATTTCAAAGCATCAAACATA
CTGCTTGATGGGTCCTACACTGCCAAGATCTCAGATTTTGGCTTGGCAAA
ATTGGGTCCTTCAGCTAGTCAGTCTCATGTGACTACCCGAGTTATGGGCA
CATATGGTTATGCTGCTCCTGAGTATGTTGCCACAGGACACTTGTATGTG
AAGAGTGATGTGTATGGTTTTGGGGTTGTTTTGGTAGAGATACTACAGGC
TTACGAGCCCTGGATACAACCGTCCAGTGGTCACATAT
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