CX295766

Overview
NameCX295766
Unique NameCX295766
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: DRKD_DICDI (Probable serine/threonine-protein kinase drkD OS=Dictyostelium discoideum GN=drkD PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.203e-15
Identity = 41/107 (38.32%), Postives = 65/107 (60.75%), Query Frame = 1
Query:  346 WNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM-GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPW 663
            W +RL++    ARG+ +LH+ +  +I+RD K  N+L+D S+  K++DFGLA +     +SH   + M GT G+ APE +A      K+DVY + +VL E+L    P+
Sbjct:  946 WGLRLQLGFDCARGMTYLHSRNPIIIHRDLKTDNLLVDDSWQVKVADFGLATV-----KSHTFAKTMCGTTGWVAPEVLAEEGYTEKADVYSYAIVLWELLTRLIPY 1047          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.184e-15
Identity = 49/113 (43.36%), Postives = 69/113 (61.06%), Query Frame = 1
Query:  322 GASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            G+   PL W+ R++IAI AARGLA LH S K +++ + KASNILL  +    +SD+GL +L  ++S  +         GY APE + T  +  KSDVY FGV+L+E+L    P
Sbjct:  440 GSGRTPLDWDNRMRIAITAARGLAHLHVSAK-LVHGNIKASNILLHPNQDTCVSDYGLNQLFSNSSPPNRLA------GYHAPEVLETRKVTFKSDVYSFGVLLLELLTGKSP 545          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.184e-15
Identity = 47/130 (36.15%), Postives = 69/130 (53.08%), Query Frame = 1
Query:  304 F*GMAGGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQ-VIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATG-HLYVKSDVYGFGVVLVEILQAYEPWIQPSSGHI 687
            F G +       L W+ R +IA+G A+ L+FLH   K  +++ + K++NILLD  Y AK+SD+GL K  P      +T +     GY APE          K DVY +GVVL+E++   +P   PS   +
Sbjct:  684 FPGTSSSYGNTDLNWHRRFQIALGTAKALSFLHNDCKPAILHLNVKSTNILLDERYEAKLSDYGLEKFLPVMDSFGLTKKFHNAVGYIAPELAQQSLRASEKCDVYSYGVVLLELVTGRKPVESPSENQV 813          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.184e-15
Identity = 45/110 (40.91%), Postives = 65/110 (59.09%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTSD-KQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHV--TTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            L W  RL+IA+G A+G+ +LH      +++RD K+SN+LLD +  A + DFGLAK+      ++    T    +YGY APEY  +     KSDVY  G+VL+EI+    P
Sbjct: 1053 LDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMP 1162          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: PUB51_ARATH (U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.136e-15
Identity = 47/110 (42.73%), Postives = 69/110 (62.73%), Query Frame = 1
Query:  337 PLAWNIRLKIAIGAARGLAFLHTSD-KQVIYRDFKASNILLDGSYTAKISDFGLAK---LGPS-ASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQA 651
            PL W  R +IA   A  L FLHT++ + +++RD K +NILLD +  +KI D GL+K   L PS AS     T  +GT+ Y  PEY  TG +  +SD+Y FG++L++++ A
Sbjct:  525 PLRWFERFRIAWEIASALYFLHTNEPRPIVHRDLKPANILLDRNNVSKIGDVGLSKMVNLDPSHASTVFNETGPVGTFFYIDPEYQRTGVVTPESDIYAFGIILLQLVTA 634          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: PUB33_ARATH (U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.136e-15
Identity = 45/105 (42.86%), Postives = 65/105 (61.90%), Query Frame = 1
Query:  337 PLAWNIRLKIAIGAARGLAFLHTSDKQ-VIYRDFKASNILLDGSYTAKISDFGLAKL-GPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            PL+W  R++IA      L FLH++    +++ D K +NILLD +  +K+SDFG   L  P+ S+S V T V GT  Y  PE  ++G L  KSDVY FG++L+ +L
Sbjct:  571 PLSWQNRVRIATEICAALVFLHSNKAHSLVHGDLKPANILLDSNLVSKLSDFGTCSLLHPNGSKS-VRTDVTGTVAYLDPEASSSGELTPKSDVYSFGIILLRLL 674          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.320e-15
Identity = 46/108 (42.59%), Postives = 65/108 (60.19%), Query Frame = 1
Query:  346 WNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLY--VKSDVYGFGVVLVEILQAYEP 660
            W  R KIA+G AR LAFLH      +I+RD KAS++ LD ++  ++SDFGLAK+  +     +   + G+ GY  PE++   H     KSDVY FGVVL E++   +P
Sbjct:  669 WRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDQNWEPRLSDFGLAKVFGNGLDDEI---IHGSPGYLPPEFLQPEHELPTPKSDVYCFGVVLFELMTGKKP 773          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.217e-14
Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = 1
Query:  337 PLAWNIRLKIAIGAARGLAFLHTSD-KQVIYRDFKASNILLDGSYTAKISDFGLA---KLGPSASQSHV--TTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQA 651
            PL W  R +IA   A  L FLH S  K +I+RD K +NILLD ++ +K+ D GL+   ++ P +++  +   T  +GT  Y  PEY  TG +  KSD+Y FG++L+++L A
Sbjct:  570 PLPWFERFRIAWEVAAALVFLHKSKPKPIIHRDLKPANILLDHNFVSKVGDVGLSTMVQVDPLSTKFTIYKQTSPVGTLCYIDPEYQRTGRISSKSDIYSFGMILLQLLTA 680          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.590e-14
Identity = 46/114 (40.35%), Postives = 66/114 (57.89%), Query Frame = 1
Query:  328 SVQPLAWNIRLKIAIGAARGLAFL-HTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHV-TTRVMGTYGYAAPEYVATG-HLYVKSDVYGFGVVLVEILQAYEP 660
            S  PL+W++R KI +G A+GLA+L HT     I+ + K +NILLD     KISDFGL++L  +   + +   R     GY APE       +  K DVYGFGV+++E++    P
Sbjct:  819 STPPLSWDVRYKIILGTAKGLAYLHHTFRPTTIHFNLKPTNILLDEKNNPKISDFGLSRLLTTQDGNTMNNNRFQNALGYVAPELECQNLRVNEKCDVYGFGVLILELVTGRRP 932          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: PUB53_ARATH (Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana GN=PUB53 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.590e-14
Identity = 43/111 (38.74%), Postives = 66/111 (59.46%), Query Frame = 1
Query:  334 QPLAWNIRLKIAIGAARGLAFLHTSDKQ-VIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ------SHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            QP+ W +RL+IA   A  L FLH S    +I+RD K +NILL+ ++ +K+ D GL+ +  +A         +  T  +GT  Y  PEY  TG +  KSDVY FG++++++L
Sbjct:  549 QPIPWFVRLRIAWEVASALVFLHKSKPTPIIHRDLKPANILLNHNFVSKVGDVGLSTMIQAADPLSTKFTMYKQTSPVGTLCYIDPEYQRTGRISPKSDVYAFGMIILQLL 659          
The following BLAST results are available for this feature:
BLAST of CX295766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
DRKD_DICDI3.203e-1538.32Probable serine/threonine-protein kinase drkD OS=D... [more]
Y2267_ARATH4.184e-1543.36Probable inactive receptor kinase At2g26730 OS=Ara... [more]
Y1124_ARATH4.184e-1536.15Probable LRR receptor-like serine/threonine-protei... [more]
GSO1_ARATH4.184e-1540.91LRR receptor-like serine/threonine-protein kinase ... [more]
PUB51_ARATH7.136e-1542.73U-box domain-containing protein 51 OS=Arabidopsis ... [more]
PUB33_ARATH7.136e-1542.86U-box domain-containing protein 33 OS=Arabidopsis ... [more]
Y2242_ARATH9.320e-1542.59Probable LRR receptor-like serine/threonine-protei... [more]
PUB35_ARATH1.217e-1440.54U-box domain-containing protein 35 OS=Arabidopsis ... [more]
Y3804_ARATH1.590e-1440.35Probably inactive leucine-rich repeat receptor-lik... [more]
PUB53_ARATH1.590e-1438.74Putative U-box domain-containing protein 53 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC05075F09SK DroRLeaf1 Citrus clementina cDNA clone C05075F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295766 ID=CX295766; Name=CX295766; organism=Citrus clementina; type=EST; length=688bp
AACCAGTCAGACAACGTCTACTGGGGTTTCTCGCGGCAGCAATGTCTCTG
GTAACAGCCGTTTCTCTGCATCGAGTGGGGATGAGTCTTATCCCAATGGG
CAGATCTTGCCCACCCCAAACTTGAGGATCTTCACTTTTGTAGAGCTGAG
GGCGGCAACAAGGAACTTTAAAAGTGATACCGTGCTTGGTGAGGGAGGTT
TCGGGAAGGTCTTCAAAGGTTGGCTGGATGAGAAAGCACCTGGGAAAAGT
GGAAGTGGTACTGTAATTGCTGTCAAAAAATTGAATTCTGAGAGCTTGCA
AGGTTTTGAGGAATGGCAGGGGGTGCTTCTGTTCAGCCACTTGCATGGAA
CATTAGACTTAAGATTGCCATCGGAGCAGCTAGAGGCTTGGCTTTTTTGC
ATACATCAGATAAGCAAGTTATCTACAGAGATTTCAAAGCATCAAACATA
CTGCTTGATGGGTCCTACACTGCCAAGATCTCAGATTTTGGCTTGGCAAA
ATTGGGTCCTTCAGCTAGTCAGTCTCATGTGACTACCCGAGTTATGGGCA
CATATGGTTATGCTGCTCCTGAGTATGTTGCCACAGGACACTTGTATGTG
AAGAGTGATGTGTATGGTTTTGGGGTTGTTTTGGTAGAGATACTACAGGC
TTACGAGCCCTGGATACAACCGTCCAGTGGTCACATAT
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