CX295766

Overview
NameCX295766
Unique NameCX295766
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: EFR_ARATH (LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13
Identity = 47/115 (40.87%), Postives = 62/115 (53.91%), Query Frame = 1
Query:  355 RLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKL-----GPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPWIQPSSG 681
            +L IAI  A  L +LH      V + D K SNILLD   TA +SDFGLA+L       S      +  V GT GYAAPEY   G   ++ DVY FG++L+E+    +P  +  +G
Sbjct:  823 KLNIAIDVASALEYLHVHCHDPVAHCDIKPSNILLDDDLTAHVSDFGLAQLLYKYDRESFLNQFSSAGVRGTIGYAAPEYGMGGQPSIQGDVYSFGILLLEMFSGKKPTDESFAG 937          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y5168_ARATH (Probably inactive receptor-like protein kinase At5g41680 OS=Arabidopsis thaliana GN=At5g41680 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.296e-13
Identity = 47/114 (41.23%), Postives = 62/114 (54.39%), Query Frame = 1
Query:  322 GASVQPLAWNIRLKIAIGAARGLAFLHTSDK-QVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            G S  PL W  RL+IAIGAARGLA +H +D  + ++ + K+SNI  +      I D GL  +  S  Q+      + + GY APE   T      SDVY FGVVL+E+L    P
Sbjct:  171 GESQVPLDWESRLRIAIGAARGLAIIHEADDGKFVHGNIKSSNIFTNSKCYGCICDLGLTHITKSLPQT-----TLRSSGYHAPEITDTRKSTQFSDVYSFGVVLLELLTGKSP 279          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y3475_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13
Identity = 45/108 (41.67%), Postives = 58/108 (53.70%), Query Frame = 1
Query:  355 RLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKL-----GPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            RL IAI  A  L +LH    + + + D K SN+LLD   TA +SDFGLA+L       S      +  V GT GYAAPEY   G   +  DVY FG++L+E+     P
Sbjct:  813 RLNIAIDVASVLDYLHVHCHEPIAHCDLKPSNVLLDDDLTAHVSDFGLARLLLKFDEESFFNQLSSAGVRGTIGYAAPEYGVGGQPSINGDVYSFGILLLEMFTGKRP 920          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y9865_DICDI (Probable serine/threonine-protein kinase DDB_G0280461 OS=Dictyostelium discoideum GN=DDB_G0280461 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13
Identity = 37/102 (36.27%), Postives = 65/102 (63.73%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            + W++R+KIA   A G+ +LH+  KQ+++RD K++N+LL  ++T KI DFG AK      Q+ ++  + GT  + +PE +        +D+Y FG+VL+E++
Sbjct:  111 IPWSLRVKIAKDIAEGMEYLHS--KQIMHRDLKSNNLLLGRNWTIKICDFGFAK--EITIQNPLSMTICGTDEFMSPEVILGIQYSYSADIYSFGMVLLELI 208          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: SHKC_DICDI (Dual specificity protein kinase shkC OS=Dictyostelium discoideum GN=shkC PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13
Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 1
Query:  352 IRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPW 663
            +R+++A  AA G+ +LH S+   ++RD K+SN+L+D +   KI DFGL+ L          +   GT  Y APE +        SDVY FG+VL EIL   EP+
Sbjct:  121 LRMRMARDAALGINWLHESNPVFVHRDIKSSNLLVDENMRVKICDFGLSALKQKHKMLKDQSSAKGTPLYMAPEVMMFKEFNESSDVYSFGIVLWEILTRKEPF 224          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: RIPK4_MOUSE (Receptor-interacting serine/threonine-protein kinase 4 OS=Mus musculus GN=Ripk4 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13
Identity = 44/113 (38.94%), Postives = 61/113 (53.98%), Query Frame = 1
Query:  334 QPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKL-GPSASQSHVTTRVMGTYGYAAPEYV-ATGHLY-VKSDVYGFGVVLVEILQAYEPW 663
            +PL W++R +I    A G+ FLH     +++ D K +NILLD  Y  KISDFGLAK  G S S       + GT  Y  PE +     L+  K DVY F +V+  +L   +P+
Sbjct:  111 EPLPWDLRFRIVHETAVGMNFLHCMSPPLLHLDLKPANILLDAHYHVKISDFGLAKCNGMSHSHDLSMDGLFGTIAYLPPERIREKSRLFDTKHDVYSFAIVIWGVLTQKKPF 223          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y5392_ARATH (Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana GN=At5g39020 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 41/99 (41.41%), Postives = 61/99 (61.62%), Query Frame = 1
Query:  364 IAIGAARGLAFLHTSDK-QVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVAT--GHLYVKSDVYGFGVVLVEILQA 651
            IA+G ARGL +LH   K ++++ D K  NILLD ++  K++DFGLAKL              GT GY APE V+   G +  KSDVY +G+++++++ A
Sbjct:  596 IALGIARGLEYLHYGCKTRIVHFDIKPQNILLDDNFCPKVADFGLAKLCEKRESILSLIDTRGTIGYIAPEVVSRMYGGISHKSDVYSYGMLVLDMIGA 694          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 43/109 (39.45%), Postives = 61/109 (55.96%), Query Frame = 1
Query:  337 PLAWNIRLKIAIGAARGLAFLHTSDK-QVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            PL W  R+KIAIGAA+G+A +H  +  ++++ + K+SNI L+      +SD GL     +A  S +   +    GY APE   T      SDVY FGVVL+E+L    P
Sbjct:  431 PLDWETRMKIAIGAAKGIARIHKENNGKLVHGNIKSSNIFLNSESNGCVSDLGL-----TAVMSPLAPPISRQAGYRAPEVTDTRKSSQLSDVYSFGVVLLELLTGKSP 534          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: STPKL_ARATH (Serine/threonine-protein kinase-like protein At5g23170 OS=Arabidopsis thaliana GN=At5g23170 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 43/107 (40.19%), Postives = 62/107 (57.94%), Query Frame = 1
Query:  328 SVQPL-AWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            S  PL  W  R++IA+  A  + FLH  +  +I+RD K+ NIL D ++ AK++DFGLA          +     GT GY  P Y    +L +K+DVY +GVVL+EI+
Sbjct:  120 STDPLPTWLKRIEIALQIASAVHFLH--EHGIIHRDIKSENILFDSNWEAKLADFGLAV--DFGGDKKIRPAPAGTIGYLDPCYTLPENLSMKTDVYSYGVVLLEIV 222          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: DRKB_DICDI (Probable serine/threonine-protein kinase drkB OS=Dictyostelium discoideum GN=drkB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 34/108 (31.48%), Postives = 64/108 (59.26%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPW 663
            ++W++  ++ I AA+G+ +LH S   +++RD K+ N+L+D ++  K++DFGL+ +     Q   T    GT  + +PE + +     K+DVY FG++L E     +P+
Sbjct:  484 ISWSLVKRMMIDAAKGIIYLHGSTPVILHRDLKSHNLLVDENWKVKVADFGLSTI----EQQGATMTACGTPCWTSPEVLRSQRYTEKADVYSFGIILWECATRQDPY 587          
The following BLAST results are available for this feature:
BLAST of CX295766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
EFR_ARATH1.758e-1340.87LRR receptor-like serine/threonine-protein kinase ... [more]
Y5168_ARATH2.296e-1341.23Probably inactive receptor-like protein kinase At5... [more]
Y3475_ARATH6.679e-1341.67Probable LRR receptor-like serine/threonine-protei... [more]
Y9865_DICDI8.723e-1336.27Probable serine/threonine-protein kinase DDB_G0280... [more]
SHKC_DICDI8.723e-1339.42Dual specificity protein kinase shkC OS=Dictyostel... [more]
RIPK4_MOUSE8.723e-1338.94Receptor-interacting serine/threonine-protein kina... [more]
Y5392_ARATH1.139e-1241.41Probable receptor-like protein kinase At5g39020 OS... [more]
Y4374_ARATH1.139e-1239.45Probable inactive receptor kinase At4g23740 OS=Ara... [more]
STPKL_ARATH1.488e-1240.19Serine/threonine-protein kinase-like protein At5g2... [more]
DRKB_DICDI1.488e-1231.48Probable serine/threonine-protein kinase drkB OS=D... [more]

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Properties
Property NameValue
Genbank descriptionC05075F09SK DroRLeaf1 Citrus clementina cDNA clone C05075F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295766 ID=CX295766; Name=CX295766; organism=Citrus clementina; type=EST; length=688bp
AACCAGTCAGACAACGTCTACTGGGGTTTCTCGCGGCAGCAATGTCTCTG
GTAACAGCCGTTTCTCTGCATCGAGTGGGGATGAGTCTTATCCCAATGGG
CAGATCTTGCCCACCCCAAACTTGAGGATCTTCACTTTTGTAGAGCTGAG
GGCGGCAACAAGGAACTTTAAAAGTGATACCGTGCTTGGTGAGGGAGGTT
TCGGGAAGGTCTTCAAAGGTTGGCTGGATGAGAAAGCACCTGGGAAAAGT
GGAAGTGGTACTGTAATTGCTGTCAAAAAATTGAATTCTGAGAGCTTGCA
AGGTTTTGAGGAATGGCAGGGGGTGCTTCTGTTCAGCCACTTGCATGGAA
CATTAGACTTAAGATTGCCATCGGAGCAGCTAGAGGCTTGGCTTTTTTGC
ATACATCAGATAAGCAAGTTATCTACAGAGATTTCAAAGCATCAAACATA
CTGCTTGATGGGTCCTACACTGCCAAGATCTCAGATTTTGGCTTGGCAAA
ATTGGGTCCTTCAGCTAGTCAGTCTCATGTGACTACCCGAGTTATGGGCA
CATATGGTTATGCTGCTCCTGAGTATGTTGCCACAGGACACTTGTATGTG
AAGAGTGATGTGTATGGTTTTGGGGTTGTTTTGGTAGAGATACTACAGGC
TTACGAGCCCTGGATACAACCGTCCAGTGGTCACATAT
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