CX295766

Overview
NameCX295766
Unique NameCX295766
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: YTYK2_DICDI (Probable tyrosine-protein kinase DDB_G0283397 OS=Dictyostelium discoideum GN=DDB_G0283397 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.538e-12
Identity = 43/109 (39.45%), Postives = 68/109 (62.39%), Query Frame = 1
Query:  349 NIRLKIAIGAARGLAFLHTSDKQ--VIYRDFKASNILLDGSYT-AKISDFGLAK-LGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPW 663
            +++L IA   A G+ +LHT+ K+  +++RD  +SNILL+ SYT AKI+DFGL+K + P  ++    T  MG+  + APE     +   K DVY F ++L EI+   +P+
Sbjct:  278 SLQLSIARDIAEGMNYLHTNFKEGPIVHRDLTSSNILLNSSYTVAKINDFGLSKEMKPGPTEM---TAAMGSLAWMAPECFKAENYTEKVDVYSFAIILWEIVTCRDPY 383          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: RIPK4_HUMAN (Receptor-interacting serine/threonine-protein kinase 4 OS=Homo sapiens GN=RIPK4 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.538e-12
Identity = 44/113 (38.94%), Postives = 61/113 (53.98%), Query Frame = 1
Query:  334 QPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKL-GPSASQSHVTTRVMGTYGYAAPEYV-ATGHLY-VKSDVYGFGVVLVEILQAYEPW 663
            +PL W++R +I    A G+ FLH     +++ D K +NILLD  Y  KISDFGLAK  G S S       + GT  Y  PE +     L+  K DVY F +V+  +L   +P+
Sbjct:  111 EPLPWDLRFRIIHETAVGMNFLHCMAPPLLHLDLKPANILLDAHYHVKISDFGLAKCNGLSHSHDLSMDGLFGTIAYLPPERIREKSRLFDTKHDVYSFAIVIWGVLTQKKPF 223          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y9853_DICDI (Probable serine/threonine-protein kinase DDB_G0271538 OS=Dictyostelium discoideum GN=DDB_G0271538 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12
Identity = 38/109 (34.86%), Postives = 65/109 (59.63%), Query Frame = 1
Query:  331 VQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILL----DGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            V  ++W +R+K+A+  A   ++LH+  K+VI+RD KA NIL+    DG Y AK+ DFG A++      +++T  + G+    +PE +         DVY +GV+L+E++
Sbjct:  125 VSNISWTLRMKLALDIASAFSYLHS--KKVIFRDLKAKNILVDEIGDGLYRAKVIDFGFARIFDGKDTNNLT--ICGSENTMSPEVIVGSSYNDSCDVYSYGVLLLELI 229          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: ROCO7_DICDI (Probable serine/threonine-protein kinase roco7 OS=Dictyostelium discoideum GN=roco7 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12
Identity = 43/133 (32.33%), Postives = 74/133 (55.64%), Query Frame = 1
Query:  259 YCNCCQKIEF*ELARF*GMAGGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGS----YTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            +C   + +++ +LA+F       + +  +W   LK+AI  A+G+ FLH+    +++RD K++NILL GS      AK+ DFGL+ + P   +  V  R +  + + APE +  G    K D+Y + +VL EI+
Sbjct: 1846 FCLVTELLQYGDLAKFIRN----TAETFSWGTVLKLAIDVAKGMNFLHSCKPMIVHRDLKSANILLGGSSMDNLVAKVGDFGLS-IKPIGKE--VKGRKVWNWRWLAPECMGDGQYTEKIDIYSYAIVLWEII 1971          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 45/119 (37.82%), Postives = 64/119 (53.78%), Query Frame = 1
Query:  322 GASVQPLAWNIRLKIAIGAARGLAFLHTSD-KQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPWIQPS 675
            G+   PL W+ R+KI + AA+G+A LH +   +  + + K+SN+++     A ISDFGL  L        V    M   GY APE + T     KSDVY FGV+++E+L    P   PS
Sbjct:  448 GSEKTPLDWDSRVKITLSAAKGIAHLHAAGGPKFSHGNIKSSNVIMKQESDACISDFGLTPL------MAVPIAPMRGAGYRAPEVMETRKHTHKSDVYSFGVLILEMLTGKSPVQSPS 560          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 40/113 (35.40%), Postives = 60/113 (53.10%), Query Frame = 1
Query:  346 WNIRLKIAIGAARGLAFLHTSD-KQVIYRDFKASNILLDGSYTAKISDFGLAKL-------GPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            W  R  + +G A  LA+LH      +I+ D KA N+LL   +   ++DFGLA+        G   ++      + G+YGY APE+ +   +  KSDVY +GVVL+E+L    P
Sbjct:  854 WEARYDVVLGVAHALAYLHHDCLPTIIHGDVKAMNVLLGPHFEPYLADFGLARTISGYPNTGIDLAKPTNRPPMAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGKHP 966          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y1199_DICDI (Probable serine/threonine-protein kinase DDB_G0282895 OS=Dictyostelium discoideum GN=DDB_G0282895 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 42/115 (36.52%), Postives = 68/115 (59.13%), Query Frame = 1
Query:  334 QPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPWIQPSS 678
            +PL+    +K A+  A+GLA+LH+ D   I+RD KA+NIL+D +  AK+ DFGL+++      +   T V GT  + +PE +        SDVY +G++L E+    EP+++  S
Sbjct: 1470 KPLSLEDIIKYALSVAQGLAYLHSVD--FIHRDIKAANILVDKNNNAKVGDFGLSRV---IDNNFNMTAVAGTPKWESPECLMGEAYTSASDVYSYGMMLFELATGDEPFLEIQS 1579          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y5516_ARATH (Probable receptor kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12
Identity = 42/120 (35.00%), Postives = 64/120 (53.33%), Query Frame = 1
Query:  313 MAGGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPWIQP 672
            M G    + + W  R+KIA G ++ +++LH+   + ++ D K+SNILL       +SD  L  L       ++ T    T GY APE + T  +  +SDVY FGVV++E+L    P  QP
Sbjct:  432 MHGNRGDRGVDWETRMKIATGTSKAISYLHSL--KFVHGDIKSSNILLTEDLEPCLSDTSLVTL------FNLPTHTPRTIGYNAPEVIETRRVSQRSDVYSFGVVILEMLTGKTPLTQP 543          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y9847_DICDI (Probable serine/threonine-protein kinase DDB_G0267686 OS=Dictyostelium discoideum GN=DDB_G0267686 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 37/99 (37.37%), Postives = 60/99 (60.61%), Query Frame = 1
Query:  346 WNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEI 642
            W+   K AI   RG+  LH+    +++RD K+ N+L+  ++T K++DFGL++   + S S+ TTR  GT+ Y APE V  G    K D++  G++L E+
Sbjct: 2041 WDWVFKFAIEMVRGVNCLHSWKPVIVHRDLKSLNLLVSDNWTIKVADFGLSRFATAKSASNRTTR--GTFAYCAPE-VFYGIHTTKGDIFSIGIILWEL 2136          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: TESK1_RAT (Dual specificity testis-specific protein kinase 1 OS=Rattus norvegicus GN=Tesk1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 45/113 (39.82%), Postives = 68/113 (60.18%), Query Frame = 1
Query:  325 ASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILL---DGSYTAKISDFGLAKLGPSASQS--HVTTRVMGTYGYAAPEYVATGHLY-VKSDVYGFGVVLVEIL 645
            +S +PL+W +RL +A+  A+GL +LH   K V +RD  + N L+   DG +TA + DFGLA+  P   +        V+G+  + APE V  G LY  K+DV+ FG+VL E++
Sbjct:  137 SSPEPLSWPVRLHLALDIAQGLRYLHA--KGVFHRDLTSKNCLVRREDGGFTAVVGDFGLAEKIPVYREGARKEPLAVVGSPYWMAPE-VLRGELYDEKADVFAFGIVLCELI 246          
The following BLAST results are available for this feature:
BLAST of CX295766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
YTYK2_DICDI2.538e-1239.45Probable tyrosine-protein kinase DDB_G0283397 OS=D... [more]
RIPK4_HUMAN2.538e-1238.94Receptor-interacting serine/threonine-protein kina... [more]
Y9853_DICDI3.315e-1234.86Probable serine/threonine-protein kinase DDB_G0271... [more]
ROCO7_DICDI3.315e-1232.33Probable serine/threonine-protein kinase roco7 OS=... [more]
Y5830_ARATH4.329e-1237.82Probable inactive receptor kinase At5g58300 OS=Ara... [more]
Y4265_ARATH4.329e-1235.40Probable LRR receptor-like serine/threonine-protei... [more]
Y1199_DICDI4.329e-1236.52Probable serine/threonine-protein kinase DDB_G0282... [more]
Y5516_ARATH5.654e-1235.00Probable receptor kinase At5g05160 OS=Arabidopsis ... [more]
Y9847_DICDI7.385e-1237.37Probable serine/threonine-protein kinase DDB_G0267... [more]
TESK1_RAT7.385e-1239.82Dual specificity testis-specific protein kinase 1 ... [more]

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Properties
Property NameValue
Genbank descriptionC05075F09SK DroRLeaf1 Citrus clementina cDNA clone C05075F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295766 ID=CX295766; Name=CX295766; organism=Citrus clementina; type=EST; length=688bp
AACCAGTCAGACAACGTCTACTGGGGTTTCTCGCGGCAGCAATGTCTCTG
GTAACAGCCGTTTCTCTGCATCGAGTGGGGATGAGTCTTATCCCAATGGG
CAGATCTTGCCCACCCCAAACTTGAGGATCTTCACTTTTGTAGAGCTGAG
GGCGGCAACAAGGAACTTTAAAAGTGATACCGTGCTTGGTGAGGGAGGTT
TCGGGAAGGTCTTCAAAGGTTGGCTGGATGAGAAAGCACCTGGGAAAAGT
GGAAGTGGTACTGTAATTGCTGTCAAAAAATTGAATTCTGAGAGCTTGCA
AGGTTTTGAGGAATGGCAGGGGGTGCTTCTGTTCAGCCACTTGCATGGAA
CATTAGACTTAAGATTGCCATCGGAGCAGCTAGAGGCTTGGCTTTTTTGC
ATACATCAGATAAGCAAGTTATCTACAGAGATTTCAAAGCATCAAACATA
CTGCTTGATGGGTCCTACACTGCCAAGATCTCAGATTTTGGCTTGGCAAA
ATTGGGTCCTTCAGCTAGTCAGTCTCATGTGACTACCCGAGTTATGGGCA
CATATGGTTATGCTGCTCCTGAGTATGTTGCCACAGGACACTTGTATGTG
AAGAGTGATGTGTATGGTTTTGGGGTTGTTTTGGTAGAGATACTACAGGC
TTACGAGCCCTGGATACAACCGTCCAGTGGTCACATAT
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