CX295766

Overview
NameCX295766
Unique NameCX295766
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.775e-24
Identity = 58/118 (49.15%), Postives = 78/118 (66.10%), Query Frame = 1
Query:  310 GMAGGASVQPLAWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            G+ G      L+W  R+KIA+GAARGL +LH  ++  +I+RD K+SN+LL     AKI+DF L+   P  +    +TRV+GT+GY APEY  TG L  KSDVY FGVVL+E+L   +P
Sbjct:  162 GVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 279          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.775e-24
Identity = 58/103 (56.31%), Postives = 76/103 (73.79%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            L WN R KIAIGAARGL +LH   D ++I+RD KA+NILLD  + A + DFGLAKL  +   SHVTT V GT G+ APEY++TG    K+DV+GFG++L+E++
Sbjct:  391 LDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKL-LNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 492          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.931e-24
Identity = 62/118 (52.54%), Postives = 80/118 (67.80%), Query Frame = 1
Query:  322 GASVQPLAWNIRLKIAIGAARGLAFLHTSDKQ-VIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPWIQP 672
            G ++ PL W  RL+I IGAARGL +LHT   Q +I+RD K++NILLD +  AK++DFGL+K   +  Q+HV+T V G++GY  PEY     L  KSDVY FGVVL+E L A  P I P
Sbjct:  612 GKNLSPLTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSK-DVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCA-RPAINP 727          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.931e-24
Identity = 56/103 (54.37%), Postives = 76/103 (73.79%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            L W  RLKIA+GAA+GLA+LH     ++I+RD K+SNILLD ++ A +SDFG+AK  P AS++H +T V+GT GY  PEY  T  +  KSD+Y FG+VL+E+L
Sbjct:  742 LDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIP-ASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELL 843          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.439e-24
Identity = 56/103 (54.37%), Postives = 75/103 (72.82%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTSDK-QVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            L W+ R KI IG A+GLA+LH   + ++++RD KA+N+LLD S  AKISDFGLAKL    + +H++TR+ GT GY APEY   G+L  K+DVY FGVV +EI+
Sbjct:  764 LDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDEN-THISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIV 865          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.439e-24
Identity = 54/104 (51.92%), Postives = 79/104 (75.96%), Query Frame = 1
Query:  337 PLAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            PLAW+IR +IA+G+ARGL++LH   D ++I+RD KA+NILLD  + A + DFGLA+L      +HVTT V GT G+ APEY++TG    K+DV+G+G++L+E++
Sbjct:  400 PLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARL-MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELI 502          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.410e-24
Identity = 56/107 (52.34%), Postives = 78/107 (72.90%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYE 657
            L WN R+ IA+GAARGL +LH   + ++I+RD KA+NILLD S+ A + DFGLAKL      SHVTT V GT G+ APEY++TG    K+DV+GFGV+++E++  ++
Sbjct:  395 LDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKL-LDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHK 500          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.410e-24
Identity = 55/103 (53.40%), Postives = 73/103 (70.87%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTSDK-QVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            L W+ R KI +G A+GL FLH   + ++++RD KASN+LLD    AKISDFGLAKL    + +H++TR+ GT GY APEY   G+L  K+DVY FGVV +EI+
Sbjct:  774 LDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGN-THISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIV 875          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23
Identity = 55/103 (53.40%), Postives = 75/103 (72.82%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTSDK-QVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            L W+ R K+ IG A+GLA+LH   + ++++RD KA+N+LLD S  AKISDFGLAKL    + +H++TR+ GT GY APEY   G+L  K+DVY FGVV +EI+
Sbjct:  762 LDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEEN-THISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIV 863          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23
Identity = 58/118 (49.15%), Postives = 77/118 (65.25%), Query Frame = 1
Query:  310 GMAGGASVQPLAWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            G+ G      L+W  R+KIA+GAA+GL +LH  +   +I+RD K+SNILL     AKI+DF L+   P  +    +TRV+GT+GY APEY  TG L  KSDVY FGVVL+E+L   +P
Sbjct:  157 GVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKP 274          
The following BLAST results are available for this feature:
BLAST of CX295766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
Y2706_ARATH3.775e-2449.15Probable receptor-like protein kinase At2g47060 OS... [more]
Y2239_ARATH3.775e-2456.31Probable LRR receptor-like serine/threonine-protei... [more]
Y2214_ARATH4.931e-2452.54Probable receptor-like protein kinase At2g21480 OS... [more]
ERL1_ARATH4.931e-2454.37LRR receptor-like serine/threonine-protein kinase ... [more]
Y5343_ARATH6.439e-2454.37Probable LRR receptor-like serine/threonine-protei... [more]
SERK2_ARATH6.439e-2451.92Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
Y5457_ARATH8.410e-2452.34Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH8.410e-2453.40Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH1.098e-2353.40Probable LRR receptor-like serine/threonine-protei... [more]
PTI1_SOLLC1.098e-2349.15Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]

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Properties
Property NameValue
Genbank descriptionC05075F09SK DroRLeaf1 Citrus clementina cDNA clone C05075F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295766 ID=CX295766; Name=CX295766; organism=Citrus clementina; type=EST; length=688bp
AACCAGTCAGACAACGTCTACTGGGGTTTCTCGCGGCAGCAATGTCTCTG
GTAACAGCCGTTTCTCTGCATCGAGTGGGGATGAGTCTTATCCCAATGGG
CAGATCTTGCCCACCCCAAACTTGAGGATCTTCACTTTTGTAGAGCTGAG
GGCGGCAACAAGGAACTTTAAAAGTGATACCGTGCTTGGTGAGGGAGGTT
TCGGGAAGGTCTTCAAAGGTTGGCTGGATGAGAAAGCACCTGGGAAAAGT
GGAAGTGGTACTGTAATTGCTGTCAAAAAATTGAATTCTGAGAGCTTGCA
AGGTTTTGAGGAATGGCAGGGGGTGCTTCTGTTCAGCCACTTGCATGGAA
CATTAGACTTAAGATTGCCATCGGAGCAGCTAGAGGCTTGGCTTTTTTGC
ATACATCAGATAAGCAAGTTATCTACAGAGATTTCAAAGCATCAAACATA
CTGCTTGATGGGTCCTACACTGCCAAGATCTCAGATTTTGGCTTGGCAAA
ATTGGGTCCTTCAGCTAGTCAGTCTCATGTGACTACCCGAGTTATGGGCA
CATATGGTTATGCTGCTCCTGAGTATGTTGCCACAGGACACTTGTATGTG
AAGAGTGATGTGTATGGTTTTGGGGTTGTTTTGGTAGAGATACTACAGGC
TTACGAGCCCTGGATACAACCGTCCAGTGGTCACATAT
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