CX295766

Overview
NameCX295766
Unique NameCX295766
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.435e-23
Identity = 61/118 (51.69%), Postives = 80/118 (67.80%), Query Frame = 1
Query:  322 GASVQPLAWNIRLKIAIGAARGLAFLHTSDKQ-VIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPWIQP 672
            G ++ PL W  RL+I IG+ARGL +LHT   Q +I+RD K++NILLD +  AK++DFGL+K   +  Q+HV+T V G++GY  PEY     L  KSDVY FGVVL+E L A  P I P
Sbjct:  613 GKNLAPLTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSK-DVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCA-RPAINP 728          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.874e-23
Identity = 55/109 (50.46%), Postives = 73/109 (66.97%), Query Frame = 1
Query:  322 GASVQPLAWNIRLKIAIGAARGLAFLHTSDK-QVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            G     L W+ R +I +G ARGL +LH   + ++++RD KASNILLD     K+SDFGLAKL     ++H++TRV GT GY APEY   GHL  K+DVY FGVV +E++
Sbjct:  780 GEKTLHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDD-KKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELV 887          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.874e-23
Identity = 57/120 (47.50%), Postives = 79/120 (65.83%), Query Frame = 1
Query:  313 MAGGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQ-VIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPWIQ 669
            ++G     PL W+ RLKI +  A+GL +LHT  K  +++RD K +NILLD  + AK++DFGL++  P   ++HV+T V GT GY  PEY  T  L  KSDVY FG+VL+EI+ +  P IQ
Sbjct:  658 LSGERGGSPLKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITS-RPVIQ 776          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 59/123 (47.97%), Postives = 84/123 (68.29%), Query Frame = 1
Query:  322 GASVQPLAWNIRLKIAIGAARGLAFLHTSDKQ--VIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPWIQPSSGH 684
            G+++  L W  RL+I IGAARGL +LH+S  +  +I+RD K++NILLD    AK++DFGL+K+  +  +S+++  + GT+GY  PEY+ T  L  KSDVY FGVVL+E+L A  P I P   H
Sbjct:  575 GSNLPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSKIH-NQDESNISINIKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVLFA-RPAIDPYLPH 695          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 56/110 (50.91%), Postives = 75/110 (68.18%), Query Frame = 1
Query:  337 PLAWNIRLKIAIGAARGLAFLHTSD-KQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQ--SHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYE 657
            PL+W  RL IA+ AARG+ +LH      VI+RD K+SNILLD ++TAK+SDFGL+++GP+     SH++    GT GY  PEY     L  KSDVY FGVVL+E+L  ++
Sbjct:  547 PLSWQTRLMIALDAARGIQYLHEFIVPPVIHRDIKSSNILLDATWTAKVSDFGLSQMGPTEEDDVSHLSLHAAGTLGYIDPEYYKFQQLTTKSDVYSFGVVLLELLSGHK 656          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 56/107 (52.34%), Postives = 77/107 (71.96%), Query Frame = 1
Query:  328 SVQPLAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            S  PL W  R +IA+G+ARGLA+LH   D ++I+RD KA+NILLD  + A + DFGLAKL      +HVTT V GT G+ APEY++TG    K+DV+G+GV+L+E++
Sbjct:  381 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 486          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23
Identity = 55/104 (52.88%), Postives = 73/104 (70.19%), Query Frame = 1
Query:  337 PLAWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            P+ W  R KI  G A+GLAFLH  S  + ++RD KA+NILLD   T KISDFGLA+L     ++H++T+V GT GY APEY   G+L  K+DVY FGV+++EI+
Sbjct:  775 PMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEE-EKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIV 877          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23
Identity = 57/110 (51.82%), Postives = 75/110 (68.18%), Query Frame = 1
Query:  319 GGASVQPLAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            G    + L W+ RLKIA GAA+GLA+LH     ++I+RD K+SNILLD    A+++DFG+AK     S+SH +T VMGT GY  PEY  T  L  KSDVY +G+VL+E+L
Sbjct:  735 GPTKKKTLDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAK-SLCVSKSHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELL 843          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23
Identity = 60/115 (52.17%), Postives = 76/115 (66.09%), Query Frame = 1
Query:  331 VQPLAWNIRLKIAIGAARGLAFLHTSDKQ-VIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPWIQP 672
            +  L+W  RL+I IG+ARGL +LHT   Q +I+RD K +NILLD +  AK+SDFGL+K  P   + HV+T V G++GY  PEY     L  KSDVY FGVVL E+L A  P I P
Sbjct:  621 IPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPM-DEGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCA-RPVINP 733          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23
Identity = 54/107 (50.47%), Postives = 77/107 (71.96%), Query Frame = 1
Query:  328 SVQPLAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            S  PL W  R +IA+G+ARGL++LH   D ++I+RD KA+NILLD  + A + DFGLAKL      +HVTT V GT G+ APEY++TG    K+DV+G+G++L+E++
Sbjct:  394 SQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELI 499          
The following BLAST results are available for this feature:
BLAST of CX295766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
Y4391_ARATH1.435e-2351.69Probable receptor-like protein kinase At4g39110 OS... [more]
Y5614_ARATH1.874e-2350.46Probable LRR receptor-like serine/threonine-protei... [more]
Y2289_ARATH1.874e-2347.50Probable LRR receptor-like serine/threonine-protei... [more]
Y2232_ARATH2.447e-2347.97Probable receptor-like protein kinase At2g23200 OS... [more]
ACCR4_ARATH2.447e-2350.91Serine/threonine-protein kinase-like protein CCR4 ... [more]
BAK1_ARATH4.174e-2352.34BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
RKF1_ARATH5.451e-2352.88Probable LRR receptor-like serine/threonine-protei... [more]
ERECT_ARATH5.451e-2351.82LRR receptor-like serine/threonine-protein kinase ... [more]
Y5613_ARATH7.120e-2352.17Probable receptor-like protein kinase At5g61350 OS... [more]
SERK1_ARATH7.120e-2350.47Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionC05075F09SK DroRLeaf1 Citrus clementina cDNA clone C05075F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295766 ID=CX295766; Name=CX295766; organism=Citrus clementina; type=EST; length=688bp
AACCAGTCAGACAACGTCTACTGGGGTTTCTCGCGGCAGCAATGTCTCTG
GTAACAGCCGTTTCTCTGCATCGAGTGGGGATGAGTCTTATCCCAATGGG
CAGATCTTGCCCACCCCAAACTTGAGGATCTTCACTTTTGTAGAGCTGAG
GGCGGCAACAAGGAACTTTAAAAGTGATACCGTGCTTGGTGAGGGAGGTT
TCGGGAAGGTCTTCAAAGGTTGGCTGGATGAGAAAGCACCTGGGAAAAGT
GGAAGTGGTACTGTAATTGCTGTCAAAAAATTGAATTCTGAGAGCTTGCA
AGGTTTTGAGGAATGGCAGGGGGTGCTTCTGTTCAGCCACTTGCATGGAA
CATTAGACTTAAGATTGCCATCGGAGCAGCTAGAGGCTTGGCTTTTTTGC
ATACATCAGATAAGCAAGTTATCTACAGAGATTTCAAAGCATCAAACATA
CTGCTTGATGGGTCCTACACTGCCAAGATCTCAGATTTTGGCTTGGCAAA
ATTGGGTCCTTCAGCTAGTCAGTCTCATGTGACTACCCGAGTTATGGGCA
CATATGGTTATGCTGCTCCTGAGTATGTTGCCACAGGACACTTGTATGTG
AAGAGTGATGTGTATGGTTTTGGGGTTGTTTTGGTAGAGATACTACAGGC
TTACGAGCCCTGGATACAACCGTCCAGTGGTCACATAT
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