CX295766

Overview
NameCX295766
Unique NameCX295766
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21
Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = 1
Query:  319 GGASVQPLAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            G +  +PL W  RL+IA  AA+GL +LHT  +  +I+RD K+SNILLD +  AK+SDFGL++       +HV++   GT GY  PEY A+  L  KSDVY FGVVL E+L   +P
Sbjct:  693 GSSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQ-TEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKP 806          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21
Identity = 55/107 (51.40%), Postives = 73/107 (68.22%), Query Frame = 1
Query:  334 QPLAWNIRLKIAIGAARGLAFLHTSDK-QVIYRDFKASNILLDGSYTAKISDFGLAKLGPSA-SQSH-VTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            Q L W +R K+  G ARGL +LH   + ++I+RD KASNILLD     KI+DFGLAKL  S  + +H  T+R+ GTYGY APEY   G   VK+DV+ FGV+++EI+
Sbjct:  449 QLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEII 555          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 54/112 (48.21%), Postives = 73/112 (65.18%), Query Frame = 1
Query:  313 MAGGASVQPLAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            M+G      L W  R++IA+ AA+GL +LH      +++RD K +NILL+  Y AK++DFGL++  P   +SHV+T V GT GY  PEY  T  L  KSDVY FGVVL+EI+
Sbjct:  650 MSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIV 761          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 56/110 (50.91%), Postives = 71/110 (64.55%), Query Frame = 1
Query:  337 PLAWNIRLKIAIGAARGLAFLHTSDKQVIY-RDFKASNILLDGSYTAKISDFGLAKLGPSAS--QSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYE 657
            PL+W +RL IA   A  +A LH+S    IY RD K+SNILLD  + +KISDFGL++LG S     SH++T   GT GY  P+Y     L  KSDVY FGVVLVEI+  ++
Sbjct:  405 PLSWQLRLAIACQTANAIAHLHSSVNPPIYHRDIKSSNILLDHEFNSKISDFGLSRLGMSTDFEASHISTAPQGTPGYLDPQYHQDFQLSDKSDVYSFGVVLVEIISGFK 514          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 56/103 (54.37%), Postives = 70/103 (67.96%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTSDK-QVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            L W  RL+IAI  A  LA+LH+S    +I+RD K +NILLD + TAK++DFG +KL P   +  +TT V GT GY  PEY  TG L  KSDVY FGVVL+E+L
Sbjct:  509 LTWEHRLRIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPM-DKEQLTTMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELL 610          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 55/108 (50.93%), Postives = 73/108 (67.59%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLH-TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            L W++RLKIA GAARGLA+LH   +  VI+RD K+SNILLD  + A ++DFGLA+L      +HVTT ++GT GY  PEY  +     + DVY FGVVL+E++    P
Sbjct:  849 LIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARL-LRPYDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRP 955          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: IRAK4_MOUSE (Interleukin-1 receptor-associated kinase 4 OS=Mus musculus GN=Irak4 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 51/103 (49.51%), Postives = 72/103 (69.90%), Query Frame = 1
Query:  337 PLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            PL+W+ R K+A G A G+ FLH  +   I+RD K++NILLD  +TAKISDFGLA+     +Q+ +T+R++GT  Y APE    G +  KSD+Y FGVVL+E++
Sbjct:  282 PLSWHTRCKVAQGTANGIRFLH--ENHHIHRDIKSANILLDKDFTAKISDFGLARASARLAQTVMTSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLELI 381          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.102e-21
Identity = 54/109 (49.54%), Postives = 74/109 (67.89%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTSD-KQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM-GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            L W+ R KIAIGAARGLAFLH S    +I+RD K+SN+LLD  + A++SDFG+A+L  SA  +H++   + GT GY  PEY  +     K DVY +GV+L+E+L   +P
Sbjct:  954 LDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARL-VSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKP 1061          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.664e-21
Identity = 51/103 (49.51%), Postives = 67/103 (65.05%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            L W +R +I  G ARGL +LH  S  ++I+RD KASNILLD     K++DFG A+L  S      T R+ GT GY APEY+  G +  KSDVY FGV+L+E++
Sbjct:  442 LTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMI 544          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.664e-21
Identity = 55/116 (47.41%), Postives = 75/116 (64.66%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM-GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEPWIQPSSG 681
            L W+ R KIAIG+ARGLAFLH +    +I+RD K+SN+LLD +  A++SDFG+A+L  SA  +H++   + GT GY  PEY  +     K DVY +GVVL+E+L    P   P  G
Sbjct:  978 LNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARL-MSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSPDFG 1092          
The following BLAST results are available for this feature:
BLAST of CX295766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
Y1677_ARATH2.991e-2148.70Probable LRR receptor-like serine/threonine-protei... [more]
CRK29_ARATH2.991e-2151.40Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
Y5188_ARATH3.907e-2148.21Probable LRR receptor-like serine/threonine-protei... [more]
WAKLR_ARATH3.907e-2150.91Wall-associated receptor kinase-like 21 OS=Arabido... [more]
WAK3_ARATH3.907e-2154.37Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
PSKR2_ARATH3.907e-2150.93Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
IRAK4_MOUSE3.907e-2149.51Interleukin-1 receptor-associated kinase 4 OS=Mus ... [more]
BRL3_ARATH5.102e-2149.54Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
CRK40_ARATH6.664e-2149.51Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
BRI1_ARATH6.664e-2147.41Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05075F09SK DroRLeaf1 Citrus clementina cDNA clone C05075F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295766 ID=CX295766; Name=CX295766; organism=Citrus clementina; type=EST; length=688bp
AACCAGTCAGACAACGTCTACTGGGGTTTCTCGCGGCAGCAATGTCTCTG
GTAACAGCCGTTTCTCTGCATCGAGTGGGGATGAGTCTTATCCCAATGGG
CAGATCTTGCCCACCCCAAACTTGAGGATCTTCACTTTTGTAGAGCTGAG
GGCGGCAACAAGGAACTTTAAAAGTGATACCGTGCTTGGTGAGGGAGGTT
TCGGGAAGGTCTTCAAAGGTTGGCTGGATGAGAAAGCACCTGGGAAAAGT
GGAAGTGGTACTGTAATTGCTGTCAAAAAATTGAATTCTGAGAGCTTGCA
AGGTTTTGAGGAATGGCAGGGGGTGCTTCTGTTCAGCCACTTGCATGGAA
CATTAGACTTAAGATTGCCATCGGAGCAGCTAGAGGCTTGGCTTTTTTGC
ATACATCAGATAAGCAAGTTATCTACAGAGATTTCAAAGCATCAAACATA
CTGCTTGATGGGTCCTACACTGCCAAGATCTCAGATTTTGGCTTGGCAAA
ATTGGGTCCTTCAGCTAGTCAGTCTCATGTGACTACCCGAGTTATGGGCA
CATATGGTTATGCTGCTCCTGAGTATGTTGCCACAGGACACTTGTATGTG
AAGAGTGATGTGTATGGTTTTGGGGTTGTTTTGGTAGAGATACTACAGGC
TTACGAGCCCTGGATACAACCGTCCAGTGGTCACATAT
back to top