CX295766

Overview
NameCX295766
Unique NameCX295766
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.703e-21
Identity = 52/113 (46.02%), Postives = 74/113 (65.49%), Query Frame = 1
Query:  310 GMAGGASVQPLAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            G +GG+ +    W  RL+IA+ AA GL +LH+     +++RD K +NILLD    AK++DFGL++  P   ++H++T V GT GY  PEY  T  L  KSDVY FG+VL+EI+
Sbjct:  666 GKSGGSFIN---WGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEII 775          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.703e-21
Identity = 53/112 (47.32%), Postives = 72/112 (64.29%), Query Frame = 1
Query:  334 QPLAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKL--GPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            Q + W +R  +A+GAA+GL +LH   D+ VI+RD K+SNILLD  +  +I+DFGLAK+    S  +      V GT GY APEY  T  +  KSDVY FGVVL+E++   +P
Sbjct:  781 QEIGWRVRQALALGAAKGLEYLHHGLDRPVIHRDVKSSNILLDEEWRPRIADFGLAKIIQADSVQRDFSAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKP 892          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 8.703e-21
Identity = 51/103 (49.51%), Postives = 68/103 (66.02%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            L W  R  I +G +RGL +LH  S+  +I+RD K+SN+LLD     KISDFG+A+     +   VT RV+GTYGY APEY   G   VK+DVY FGV+++EI+
Sbjct:  427 LDWEKRYNIIVGVSRGLLYLHEGSEFPIIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEII 529          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20
Identity = 50/108 (46.30%), Postives = 68/108 (62.96%), Query Frame = 1
Query:  325 ASVQPLAWNIRLKIAIGAARGLAFLHTSDK-QVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            A    L W  R K+  G ARG+ +LH   +  +I+RD KASNILLD     K++DFGLA++         T+R++GT+GY APEY   G   VKSDVY FGV+++EI+
Sbjct:  426 AKQNQLDWTRRYKVIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKLADFGLARIFGMDQTQENTSRIVGTFGYMAPEYAIHGQFSVKSDVYSFGVLVLEII 533          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20
Identity = 51/106 (48.11%), Postives = 72/106 (67.92%), Query Frame = 1
Query:  343 AWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSH----VTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            +W +R+KIA+ AARG+ +LH  +   +I+RD K+SNILLD ++ A++SDFGL+ +GP   + H      T+  GT GY  PEY +   L  KSDVYG GVVL+E+L
Sbjct:  601 SWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDSNWVARVSDFGLSLMGPVLGKDHNPYQRPTKAAGTVGYIDPEYYSLNVLTDKSDVYGLGVVLLELL 706          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 51/108 (47.22%), Postives = 72/108 (66.67%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTSDKQVIY-RDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            + W +RL+IAI  A  L+++H++    IY RD K +NILLD  Y AK+SDFG ++   + +Q+H+TT V GT+GY  PEY  +     KSDVY FGVVLVE++   +P
Sbjct:  528 MTWEVRLRIAIEIAGALSYMHSAASIPIYHRDIKTTNILLDEKYRAKVSDFGTSR-SITIAQTHLTTLVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKP 634          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 49/108 (45.37%), Postives = 76/108 (70.37%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLH-TSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            L WN R+K+A+G A+ L +LH      +++R+FK++NILLD      +SD GLA L P+ ++  V+T+V+G++GY+APE+  +G   VKSDVY FGVV++E+L   +P
Sbjct:  492 LTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPN-TERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKP 598          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 52/108 (48.15%), Postives = 72/108 (66.67%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            L W  RL+IA GAA+GL +LH   D  +++RD K+SNILLD ++ + ++DFGLA+L  S  ++HV+T ++GT GY  PEY        K DVY FGVVL+E+L    P
Sbjct:  829 LKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARL-MSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRP 935          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 51/103 (49.51%), Postives = 67/103 (65.05%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            L W +R +I  G ARGL +LH  S  ++I+RD KASNILLD     K++DFG A+L  S      T R+ GT GY APEY+  G +  KSDVY FGV+L+E++
Sbjct:  447 LTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMI 549          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 54/109 (49.54%), Postives = 73/109 (66.97%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTSD-KQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVM-GTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            L W  R KIAIGAARGLAFLH S    +I+RD K+SN+LLD  + A++SDFG+A+L  SA  +H++   + GT GY  PEY  +     K DVY +GV+L+E+L   +P
Sbjct:  956 LNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDEDFEARVSDFGMARL-VSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKP 1063          
The following BLAST results are available for this feature:
BLAST of CX295766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
PAM74_ARATH8.703e-2146.02Probable LRR receptor-like serine/threonine-protei... [more]
IKU2_ARATH8.703e-2147.32Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
CRK27_ARATH8.703e-2149.51Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
CRK15_ARATH1.137e-2046.30Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
ACCR3_ARATH1.137e-2048.11Putative serine/threonine-protein kinase-like prot... [more]
WAKLF_ARATH1.485e-2047.22Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
SRF8_ARATH1.485e-2045.37Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
PSKR1_ARATH1.485e-2048.15Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
CRK39_ARATH1.485e-2049.51Putative cysteine-rich receptor-like protein kinas... [more]
BRL1_ARATH1.485e-2049.54Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC05075F09SK DroRLeaf1 Citrus clementina cDNA clone C05075F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295766 ID=CX295766; Name=CX295766; organism=Citrus clementina; type=EST; length=688bp
AACCAGTCAGACAACGTCTACTGGGGTTTCTCGCGGCAGCAATGTCTCTG
GTAACAGCCGTTTCTCTGCATCGAGTGGGGATGAGTCTTATCCCAATGGG
CAGATCTTGCCCACCCCAAACTTGAGGATCTTCACTTTTGTAGAGCTGAG
GGCGGCAACAAGGAACTTTAAAAGTGATACCGTGCTTGGTGAGGGAGGTT
TCGGGAAGGTCTTCAAAGGTTGGCTGGATGAGAAAGCACCTGGGAAAAGT
GGAAGTGGTACTGTAATTGCTGTCAAAAAATTGAATTCTGAGAGCTTGCA
AGGTTTTGAGGAATGGCAGGGGGTGCTTCTGTTCAGCCACTTGCATGGAA
CATTAGACTTAAGATTGCCATCGGAGCAGCTAGAGGCTTGGCTTTTTTGC
ATACATCAGATAAGCAAGTTATCTACAGAGATTTCAAAGCATCAAACATA
CTGCTTGATGGGTCCTACACTGCCAAGATCTCAGATTTTGGCTTGGCAAA
ATTGGGTCCTTCAGCTAGTCAGTCTCATGTGACTACCCGAGTTATGGGCA
CATATGGTTATGCTGCTCCTGAGTATGTTGCCACAGGACACTTGTATGTG
AAGAGTGATGTGTATGGTTTTGGGGTTGTTTTGGTAGAGATACTACAGGC
TTACGAGCCCTGGATACAACCGTCCAGTGGTCACATAT
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