CX295770

Overview
NameCX295770
Unique NameCX295770
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.198e-42
Identity = 98/222 (44.14%), Postives = 126/222 (56.76%), Query Frame = 2
Query:   29 VGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGI---FTGRCGTSL-DHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEAS 682
            VG+  P   DWR KGAV +VKDQG CGSCWAFS    VEG   +  G+L+SLSEQEL+DCD   ++ C GGL   A+  I + GG++TEDDY Y+    SC+   + AKV  I+D  ++  N++K         P+SVAI   GM  Q Y  GI       C   L DH V  VGYG  +   +W +KNSWG+ WGE GY  + R      +G CG+   AS
Sbjct:  267 VGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD-KMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVY-INDSVELSQNEQKLAAWLAKRGPISVAINAFGM--QFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRG-----SGACGVNTMAS 479          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.158e-41
Identity = 93/194 (47.94%), Postives = 118/194 (60.82%), Query Frame = 2
Query:   50 SVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGS---LISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGI-FTGRCG-TSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGG 613
            +VDWR +GAV  +K+QG CG CW+FST  + EG + I +G+   L+SLSEQ L+DC  SY N GC GGLM  AFE+II+N GIDTE  YPY A DG    ++ +     I  Y++V    E +LQ A  N PVSVAI+    +FQLYESGI +   C  T LDHGV  VGYG+ + +          SS   GG
Sbjct:  114 TVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKECKFKTSNIGAQIVSYQNVTSGSEASLQSASNNAPVSVAIDASNESFQLYESGIYYEPACSPTQLDHGVLVVGYGSGSSSSSGSSSGKSSSSSSTGG 307          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.158e-41
Identity = 98/222 (44.14%), Postives = 126/222 (56.76%), Query Frame = 2
Query:   29 VGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGI---FTGRCGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEAS 682
            + +  P   DWRKKGAV EVK+QG CGSCWAFS    VEG   +  G+L+SLSEQEL+DCD   ++ C GGL   A+  I + GG++TEDDY Y+    +C+   + AKV  I+D  ++  N+ K         P+SVAI   GM  Q Y  GI   F   C    +DH V  VGYG  +   YW +KNSWGS WGE GY  + R      +G CG+   AS
Sbjct:  245 INDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCD-KVDKACLGGLPSNAYAAIKNLGGLETEDDYGYQGHVQTCNFSAQMAKVY-INDSVELSRNENKIAAWLAQKGPISVAINAFGM--QFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRG-----SGACGVNTMAS 457          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 1.975e-41
Identity = 93/223 (41.70%), Postives = 133/223 (59.64%), Query Frame = 2
Query:   41 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC-DTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRC-GTSLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 685
            +P  VDWR+ G V  VK+QG C S WAFS   ++EG     T  LI LSEQ L+DC  ++   GC+GG M YAF+++ DNGG+ TE+ YPY+     C  + +N+    + D+  +P   E+AL KAVA   P+SVA++    +FQ Y SGI +  +C    L+H V  VGYG E    +G  +W+VKNSWG  WG  GY+++ ++     +  CGIA  ++Y
Sbjct:  114 VPKRVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDCMGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRGQGRECRYHAENS-AANVRDFVQIP-GSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKRVHLNHAVLVVGYGFEGEESDGNSFWLVKNSWGEEWGMKGYMKLAKD----WSNHCGIATYSTY 330          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.975e-41
Identity = 84/205 (40.98%), Postives = 118/205 (57.56%), Query Frame = 2
Query:   23 PRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNV 637
            P V + LP + DWR    +  VKDQG+CGSCWA + +  +E +  I    LI+LSEQ+L+DCD S N  C+GGLM  AFE +++ GG+  E DYPY+   G C    K   +        +  N+E   ++ +   P+++AI+   ++   Y  GI        L+H V  VGYGTE G  YW +KNSWGS WGE GY R++RN+
Sbjct:  120 PDVHDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCD-SANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGTKGVCKIDNKKFALSVSSCKRYIFQNEENLKKELITMGPIAMAIDAASIS--TYSKGIIHFCENLGLNHAVLLVGYGTEGGVSYWTLKNSWGSDWGEDGYFRVKRNI 321          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.369e-41
Identity = 91/213 (42.72%), Postives = 128/213 (60.09%), Query Frame = 2
Query:   44 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG---INKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRM--ERNVAGTLT 652
            P+SVDWRK+G V  ++DQ  CGSC+ F ++AA+EG   I K    + + LSE+ +V C     N GCNGGL    +++II++G +  E DYPY   D +C T  K+   +T   Y  VP N+E  L+ A++   V V+I+     FQLY+SG +T  +C  +   L+H V AVGYG  +G + WIV+NSWG+ WG+ GYI M  E N  G  T
Sbjct:   95 PESVDWRKEGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHMVQCTRDNGNNGCNGGLGSNVYDYIIEHG-VAKESDYPYTGSDSTCKTNVKSFAKIT--GYTKVPRNNEAELKAALSQGLVDVSIDASSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVAT 304          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 3.369e-41
Identity = 97/227 (42.73%), Postives = 130/227 (57.27%), Query Frame = 2
Query:   29 VGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 685
            V   LPD  DWR++G V  V++QG CGSCWAF+   A+EG     TG+L  LS Q L+DC  T  N+GC  G    AFE+++ N G++ E  YPY+  DG C  YR       I DY ++P N E  L  AVA+  PVS AI+    +F+ Y  GI +   C +  ++H V  VGYG+E    +G +YW++KNSWG  WG  GY++    +A      CGIA  ASY
Sbjct:  110 VSIGLPDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVGNKGCQSGTAHQAFEYVLKNKGLEAEATYPYEGKDGPC-RYRSENASANITDYVNLPPN-ELYLWVAVASIGPVSAAIDASHDSFRFYNGGIYYEPNCSSYFVNHAVLVVGYGSEGDVKDGNNYWLIKNSWGEEWGMNGYMQ----IAKDHNNHCGIASLASY 330          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 9.803e-41
Identity = 94/214 (43.93%), Postives = 126/214 (58.88%), Query Frame = 2
Query:   44 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG---INKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVT-IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRM--ERNVAGTLT 652
            P +VDWRKKG V  ++DQG+CGSC+ F +IAA+EG   I K      + LSE+ +V C     N GCNGGL    + +I++NG I  E DYPY   D +C   R + K    I  Y  V  N+E  L+ A++   V V+I+   + FQLY+SG +T  +C  +   L+H V AVGYG  +G + WIV+NSWG+ WGE GYI M  E N  G  T
Sbjct:   95 PKAVDWRKKGKVTPIRDQGNCGSCYTFGSIAALEGRLLIEKGGDSETLDLSEEHMVQCTREDGNNGCNGGLGSNVYNYIMENG-IAKESDYPYTGSDSTC---RSDVKAFAKIKSYNRVARNNEVELKAAISQGLVDVSIDASSVQFQLYKSGAYTDTQCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGEKGYINMVIEGNTCGVAT 304          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.280e-40
Identity = 91/213 (42.72%), Postives = 125/213 (58.69%), Query Frame = 2
Query:   44 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG---INKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRM--ERNVAGTLT 652
            P+SVDWR +G V  ++DQ  CGSC+ F ++AA+EG   I K    + + LSE+ LV C     N GCNGGL    +++II NG +  E DYPY   D +C T  K    +T   Y  VP N+E  L+ A++   V V+I+     FQLY+SG ++  +C  +   L+H V AVGYG  +G + WIV+NSWG+ WG+ GYI M  E N  G  T
Sbjct:   88 PESVDWRAQGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGNANTLDLSEEHLVQCTRDNGNNGCNGGLGSNVYDYIIQNG-VAKESDYPYTGTDSTCKTNVKAFAKIT--GYNKVPRNNEAELKAALSQGLVDVSIDASSAKFQLYKSGAYSDTKCKNNFFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVAT 297          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.672e-40
Identity = 95/223 (42.60%), Postives = 129/223 (57.85%), Query Frame = 2
Query:   41 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC-DTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRC-GTSLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 685
            +P  VDWR  G V  VK+QG C S WAFS   ++EG     TG L+ LSEQ L+DC  ++    C+GG M  AF+++ DNGG+ TE+ YPY      C  + +N+    + D+  +P   E+AL KAVA   P+SVA++    +FQ Y+SGI +  +C    L+H V  VGYG E    +G  YW+VKNSWG  WG  GYI+    +A      CGIA  A+Y
Sbjct:  114 VPKYVDWRMLGYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQNLLDCMGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPYIGPGRKCRYHAENS-AANVRDFVQIP-GREEALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKRVHLNHAVLVVGYGFEGEESDGNSYWLVKNSWGEEWGMKGYIK----IAKDWNNHCGIATLATY 330          
The following BLAST results are available for this feature:
BLAST of CX295770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
CATF_HUMAN5.198e-4244.14Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CYSP4_DICDI1.158e-4147.94Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CATF_MOUSE1.158e-4144.14Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
TEST2_RAT1.975e-4141.70Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CATV_NPVAH1.975e-4140.98Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CPP2_ENTHI3.369e-4142.72Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
CATJ_MOUSE3.369e-4142.73Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
CPP1_ENTHI9.803e-4143.93Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
CPP3_ENTHI1.280e-4042.72Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]
TEST2_MOUSE1.672e-4042.60Testin-2 OS=Mus musculus PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05075G01SK DroRLeaf1 Citrus clementina cDNA clone C05075G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295770 ID=CX295770; Name=CX295770; organism=Citrus clementina; type=EST; length=687bp
AAAGAGGAGCGATCGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACT
CTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGA
AGCTGTGGGAGTTGCTGGGCATTTTCAACCATTGCTGCTGTAGAGGGTAT
AAACAAGATTGTTACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGG
TGGATTGTGATACATCATATAATGAAGGATGTAATGGTGGTTTGATGGAC
TATGCATTCGAGTTCATTATTGATAATGGAGGTATTGACACAGAAGATGA
TTACCCCTACAAAGCCATTGATGGTAGCTGTGACACATATCGGAAAAATG
CCAAAGTAGTTACAATTGATGACTATGAAGATGTTCCCCTAAATGACGAG
AAAGCTTTGCAAAAGGCAGTTGCAAATCAACCCGTGAGTGTTGCGATTGA
AGGAGGTGGCATGGCATTCCAGTTATATGAATCGGGTATATTTACGGGAA
GATGTGGGACATCTCTGGACCATGGTGTTACTGCTGTTGGATATGGCACA
GAAAATGGAGCTGATTACTGGATTGTGAAGAATTCATGGGGCAGTAGCTG
GGGAGAGGGTGGCTATATTAGGATGGAGCGTAACGTGGCTGGCACTCTCA
CGGGCAAGTGTGGAATTGCCATGGAGGCCTCATATCC
back to top