CX295770

Overview
NameCX295770
Unique NameCX295770
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: TINAL_RAT (Tubulointerstitial nephritis antigen-like OS=Rattus norvegicus GN=Tinagl1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16
Identity = 77/247 (31.17%), Postives = 116/247 (46.96%), Query Frame = 2
Query:   32 GEALPDSVDWRKK--GAVAEVKDQGSCGSCWAFSTIA-AVEGINKIVTGSLIS-LSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPY---KAIDGSCDTYR-------------------KNAKVVTIDDYEDVPL----NDEKALQK-AVANQPVSVAIEGGGMAFQLYESGIFT------GRCGTSLDHGVTAV---GYGTENGAD-----YWIVKNSWGSSWGEGGYIRMERNV 637
            GE LP + +  +K    + E  DQG+C   WAFST A A + ++    G +   LS Q L+ CDT + +GC GG +D A+ F +   G+ +++ YP+   +  D +  T R                    N++V + D Y+  P+    +DEK + K  + N PV   +E     F LY+ GI++      GR      HG  +V   G+G E   D     YW   NSWG  WGE G+ R+ R +
Sbjct:  199 GEVLPTAFEASEKWPNLIHEPLDQGNCAGSWAFSTAAVASDRVSIHSLGHMTPILSPQNLLSCDTHHQKGCRGGRLDGAWWF-LRRRGVVSDNCYPFSGREQNDEASPTPRCMMHSRAMGRGKRQATSRCPNSQVDSNDIYQVTPVYRLASDEKEIMKELMENGPVQALME-VHEDFFLYQRGIYSHTPVSQGRPEQYRRHGTHSVKITGWGEETLPDGRTIKYWTAANSWGPWWGERGHFRIVRGI 443          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CTSB_DICDI (Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.684e-16
Identity = 65/239 (27.20%), Postives = 104/239 (43.51%), Query Frame = 2
Query:   29 VGEALPDS----VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKA-----IDGSCDTY----------RKNAKVVTIDDYEDVPL-----NDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLD-HGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIA 670
            +G  +P S     +W     ++++++Q  CGSCWAF    +      I     + LS  ++V CD + N GC GG    A+ ++   G + +E+  PY           C  +          + N+ ++   D   +       +DE  +Q+ V N PV          F  Y+SG++    G  L  H V  VG+GT NG DY+   N W +SWG+ G   ++R       G CGI+
Sbjct:   75 LGVQIPTSFNAQTNWPNCTTISQIQNQARCGSCWAFGATESATDRLCIHNNENVQLSFMDMVTCDETDN-GCEGGDAFSAWNWLRKQGAV-SEECLPYTIPTCPPAQQPCLNFVNTPSCTKECQSNSSLIYSQDKHKMAKIYSFDSDEAIMQEIVTNGPVEACFTVFE-DFLAYKSGVYVHTTGKDLGGHCVKLVGFGTLNGVDYYAANNQWTTSWGDNGTFLIKR-------GDCGIS 303          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: TINAL_MOUSE (Tubulointerstitial nephritis antigen-like OS=Mus musculus GN=Tinagl1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16
Identity = 78/256 (30.47%), Postives = 117/256 (45.70%), Query Frame = 2
Query:   32 GEALPDSVDWRKK--GAVAEVKDQGSCGSCWAFSTIA-AVEGINKIVTGSLIS-LSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGS-------CDTYRK--------------NAKVVTIDDYEDVPL----NDEKALQK-AVANQPVSVAIEGGGMAFQLYESGIFT------GRCGTSLDHGVTAV---GYGTENGAD-----YWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGI 667
            GE LP + +  +K    + E  DQG+C   WAFST A A + ++    G +   LS Q L+ CDT + +GC GG +D A+ F +   G+ +++ YP+   + +       C  + +              N +V + D Y+  P     +DEK + K  + N PV   +E     F LY+ GI++      GR      HG  +V   G+G E   D     YW   NSWG  WGE G+ R+ R      T +C I
Sbjct:  199 GEVLPTAFEASEKWPNLIHEPLDQGNCAGSWAFSTAAVASDRVSIHSLGHMTPILSPQNLLSCDTHHQQGCRGGRLDGAWWF-LRRRGVVSDNCYPFSGREQNEASPTPRCMMHSRAMGRGKRQATSRCPNGQVDSNDIYQVTPAYRLGSDEKEIMKELMENGPVQALME-VHEDFFLYQRGIYSHTPVSQGRPEQYRRHGTHSVKITGWGEETLPDGRTIKYWTAANSWGPWWGERGHFRIVRG-----TNECDI 447          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATZ_MOUSE (Cathepsin Z OS=Mus musculus GN=Ctsz PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15
Identity = 75/236 (31.78%), Postives = 108/236 (45.76%), Query Frame = 2
Query:   41 LPDSVDWRKKGAV---AEVKDQGS---CGSCWAF-STIAAVEGINKIVTGSL--ISLSEQELVDCDTSYNEGCNGG----LMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVV------TIDDYEDVPLND-------EKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS-LDHGVTAVGYGTEN-GADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCG 664
            LP + DWR    V   +  ++Q     CGSCWA  ST A  + IN    G+   I LS Q ++DC  + +  C GG    + +YA +      GI  E    Y+A D  CD + +           TI +Y    + D       EK + +  AN P+S  I    M    Y  GI+      + ++H ++  G+G  N G +YWIV+NSWG  WGE G++R+   V  T  G  G
Sbjct:   64 LPKNWDWRNVNGVNYASVTRNQHIPQYCGSCWAHGSTSAMADRINIKRKGAWPSILLSVQNVIDCGNAGS--CEGGNDLPVWEYAHKH-----GIPDETCNNYQAKDQDCDKFNQCGTCTEFKECHTIQNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATEMMSN-YTGGIYAEHQDQAVINHIISVAGWGVSNDGIEYWIVRNSWGEPWGEKGWMRI---VTSTYKGGTG 288          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATZ_BOVIN (Cathepsin Z OS=Bos taurus GN=CTSZ PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15
Identity = 69/219 (31.51%), Postives = 101/219 (46.12%), Query Frame = 2
Query:   41 LPDSVDWRKKGAV---AEVKDQGS---CGSCWAF-STIAAVEGINKIVTGSLIS--LSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYR--------------KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS-LDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRM 625
            LP S DWR    V   +  ++Q     CGSCWA  ST A  + IN    G+  S  LS Q ++DC  + +  C GG     +E+     GI  E    Y+A D  CD +               KN  +  + DY  +    EK + +   N P+S  I         Y  GI++     + ++H V+  G+G  +G +YWIV+NSWG  WGE G++R+
Sbjct:   63 LPKSWDWRNVNGVNYASVTRNQHIPQYCGSCWAHGSTSAMADRINIKRKGAWPSTLLSVQHVIDCGDAGS--CEGGNDLPVWEYA-HRHGIPDETCNNYQAKDQECDKFNQCGTCTEFKECHVIKNYTLWKVGDYGSLS-GREKMMAEIYTNGPISCGIMATEKMSN-YTGGIYSEYNDQAFINHIVSVAGWGVSDGMEYWIVRNSWGEPWGEHGWMRI 276          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATZ_RAT (Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.176e-15
Identity = 75/236 (31.78%), Postives = 108/236 (45.76%), Query Frame = 2
Query:   41 LPDSVDWRKKGAV---AEVKDQGS---CGSCWAF-STIAAVEGINKIVTGSLIS--LSEQELVDCDTSYNEGCNGG----LMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVV------TIDDYEDVPLND-------EKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSL-DHGVTAVGYGTEN-GADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCG 664
            LP + DWR    V   +  ++Q     CGSCWA  ST A  + IN    G+  S  LS Q ++DC  + +  C GG    + +YA +      GI  E    Y+A D  CD + +           TI +Y    + D       EK + +  AN P+S  I         Y  GI+T     ++ +H ++  G+G  N G +YWIV+NSWG  WGE G++R+   V  T  G  G
Sbjct:   64 LPKNWDWRNVNGVNYASVTRNQHIPQYCGSCWAHGSTSALADRINIKRKGAWPSTLLSVQNVIDCGNAGS--CEGGNDLPVWEYAHKH-----GIPDETCNNYQAKDQECDKFNQCGTCTEFKECHTIQNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATERMSN-YTGGIYTEYQNQAIINHIISVAGWGVSNDGIEYWIVRNSWGEPWGERGWMRI---VTSTYKGGTG 288          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CYSP3_CARCN (Cysteine proteinase 3 (Fragment) OS=Carica candamarcensis PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.058e-14
Identity = 35/42 (83.33%), Postives = 38/42 (90.48%), Query Frame = 2
Query:   44 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG 169
            P+S+DWRKKGAV  VK+QGSCGSCWAFSTIA VEGINKIV G
Sbjct:    2 PESIDWRKKGAVTPVKNQGSCGSCWAFSTIATVEGINKIVHG 43          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CYSP4_CARCN (Cysteine proteinase 4 (Fragment) OS=Carica candamarcensis PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 2
Query:   44 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG 169
            P+S+DWRKKGAV  VK+QGSCGSCWAFSTI  VEGINKI TG
Sbjct:    2 PESIDWRKKGAVTPVKNQGSCGSCWAFSTIVTVEGINKIRTG 43          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CYSP2_CARCN (Cysteine proteinase 2 (Fragment) OS=Carica candamarcensis PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.022e-13
Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 2
Query:   44 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG 169
            P SVDWR+KGAV  VKDQ  CGSCWAFST+A VEGINKIVTG
Sbjct:    2 PGSVDWRQKGAVTPVKDQNPCGSCWAFSTVATVEGINKIVTG 43          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: TINAG_BOVIN (Tubulointerstitial nephritis antigen OS=Bos taurus GN=TINAG PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 59/221 (26.70%), Postives = 92/221 (41.63%), Query Frame = 2
Query:   92 DQGSCGSCWAFSTIAAVEGINKIVTGS--LISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPY----KAIDGSC-------------------DTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLD---------HGVTAVGYGTENGAD-----YWIVKNSWGSSWGEGGYIRMERNV 637
            DQ +C + WAFST +       I +      +LS Q L+ C      GCN G +D A+ ++   G + +   YP      A +  C                   ++  K+ ++        V  N+ + +++ + N PV   ++     F  Y++GI+     T+ D         H V   G+GT  GA      +WI  NSWG SWGE GY R+ R V
Sbjct:  236 DQKNCAASWAFSTASVAADRIAIQSQGRYTANLSPQNLISCCAKKRHGCNSGSVDRAWWYLRKRGLV-SHACYPLFKDQNATNNGCAMASRSDGRGKRHATTPCPNSIEKSNRIYQCSPPYRVSSNETEIMREIMQNGPVQAIMQVHEDFFN-YKTGIYRHITSTNEDSEKYRKFRTHAVKLTGWGTLRGAQGQKEKFWIAANSWGKSWGENGYFRILRGV 454          
The following BLAST results are available for this feature:
BLAST of CX295770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
TINAL_RAT1.289e-1631.17Tubulointerstitial nephritis antigen-like OS=Rattu... [more]
CTSB_DICDI1.684e-1627.20Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE... [more]
TINAL_MOUSE2.199e-1630.47Tubulointerstitial nephritis antigen-like OS=Mus m... [more]
CATZ_MOUSE1.425e-1531.78Cathepsin Z OS=Mus musculus GN=Ctsz PE=2 SV=1[more]
CATZ_BOVIN1.862e-1531.51Cathepsin Z OS=Bos taurus GN=CTSZ PE=2 SV=2[more]
CATZ_RAT3.176e-1531.78Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2[more]
CYSP3_CARCN2.058e-1483.33Cysteine proteinase 3 (Fragment) OS=Carica candama... [more]
CYSP4_CARCN5.989e-1480.95Cysteine proteinase 4 (Fragment) OS=Carica candama... [more]
CYSP2_CARCN1.022e-1380.95Cysteine proteinase 2 (Fragment) OS=Carica candama... [more]
TINAG_BOVIN6.622e-1326.70Tubulointerstitial nephritis antigen OS=Bos taurus... [more]

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Properties
Property NameValue
Genbank descriptionC05075G01SK DroRLeaf1 Citrus clementina cDNA clone C05075G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295770 ID=CX295770; Name=CX295770; organism=Citrus clementina; type=EST; length=687bp
AAAGAGGAGCGATCGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACT
CTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGA
AGCTGTGGGAGTTGCTGGGCATTTTCAACCATTGCTGCTGTAGAGGGTAT
AAACAAGATTGTTACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGG
TGGATTGTGATACATCATATAATGAAGGATGTAATGGTGGTTTGATGGAC
TATGCATTCGAGTTCATTATTGATAATGGAGGTATTGACACAGAAGATGA
TTACCCCTACAAAGCCATTGATGGTAGCTGTGACACATATCGGAAAAATG
CCAAAGTAGTTACAATTGATGACTATGAAGATGTTCCCCTAAATGACGAG
AAAGCTTTGCAAAAGGCAGTTGCAAATCAACCCGTGAGTGTTGCGATTGA
AGGAGGTGGCATGGCATTCCAGTTATATGAATCGGGTATATTTACGGGAA
GATGTGGGACATCTCTGGACCATGGTGTTACTGCTGTTGGATATGGCACA
GAAAATGGAGCTGATTACTGGATTGTGAAGAATTCATGGGGCAGTAGCTG
GGGAGAGGGTGGCTATATTAGGATGGAGCGTAACGTGGCTGGCACTCTCA
CGGGCAAGTGTGGAATTGCCATGGAGGCCTCATATCC
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