CX295770

Overview
NameCX295770
Unique NameCX295770
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13920 contig Ccv1_Contig13920:461..1147. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 2.035e-54
Identity = 116/222 (52.25%), Postives = 141/222 (63.51%), Query Frame = 2
Query:   44 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 685
            P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG LISLSEQ LVDC     NEGCNGGLMDYAF+++ DNGG+D+E+ YPY+A + SC  Y     V     + D+P   EKAL KAVA   P+SVAI+ G  +F  Y+ GI F   C +  +DHGV  VGYG E    +   YW+VKNSWG  WG GGY++M ++        CGIA  ASY
Sbjct:  115 PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESC-KYNPKYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKD----RRNHCGIASAASY 330          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 4.533e-54
Identity = 114/223 (51.12%), Postives = 141/223 (63.23%), Query Frame = 2
Query:   41 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 685
            +P +VDWR+KG V  VK+QG CGSCWAFS    +EG   + TG LISLSEQ LVDC     N+GCNGGLMD+AF++I +NGG+D+E+ YPY+A DGSC  YR    V     + D+P   EKAL KAVA   P+SVA++    + Q Y SGI +   C +  LDHGV  VGYG E    N   YW+VKNSWG  WG  GYI+    +A      CG+A  ASY
Sbjct:  114 IPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSC-KYRAEYAVANDTGFVDIP-QQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIK----IAKDRNNHCGLATAASY 330          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 210.305 bits (534), Expect = 7.732e-54
Identity = 114/223 (51.12%), Postives = 140/223 (62.78%), Query Frame = 2
Query:   41 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 685
            +P SVDW KKG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC  +  N+GCNGGLMD AF++I DNGG+D+E+ YPY A D +   Y+          + D+P   EKAL KAVA   P+SVAI+ G  +FQ Y+SGI +   C +  LDHGV  VGYG E    N   +WIVKNSWG  WG  GY++M ++        CGIA  ASY
Sbjct:  114 VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKD----QNNHCGIATAASY 331          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.319e-53
Identity = 112/223 (50.22%), Postives = 141/223 (63.23%), Query Frame = 2
Query:   41 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 685
            +P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC     N+GCNGGLMD AF+++ DNGG+DTE+ YPY   + +  TY+          + D+P   EKAL KAVA   P+SVAI+ G  +FQ Y+SGI +   C +  LDHGV  VGYG E    N + +WIVKNSWG  WG  GY++M ++        CGI+  ASY
Sbjct:  114 VPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPEWGWNGYVKMAKD----QNNHCGISTAASY 331          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.319e-53
Identity = 113/222 (50.90%), Postives = 139/222 (62.61%), Query Frame = 2
Query:   41 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGY---GTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 685
            +P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC  +  NEGCNGGLMD AF ++ DNGG+D+E+ YPY   D     Y+          + D+P   EKAL KAVA   P+SVAI+ G  +FQ Y+SGI F   C +  LDHGV  VGY   GT++   +WIVKNSWG  WG  GY++M ++        CGIA  ASY
Sbjct:  114 IPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLP-QREKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWGWNGYVKMAKD----QNNHCGIATAASY 330          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.548e-53
Identity = 113/223 (50.67%), Postives = 139/223 (62.33%), Query Frame = 2
Query:   41 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 685
            +P SVDW KKG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC  +  N+GCNGGLMD AF++I DNG +D+E+ YPY A D +   Y+          + D+P   EKAL KAVA   P+SVAI+ G  +FQ Y+SGI +   C +  LDHGV  VGYG E    N   +WIVKNSWG  WG  GY++M ++        CGIA  ASY
Sbjct:  114 VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKD----QNNHCGIATAASY 331          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.548e-53
Identity = 109/226 (48.23%), Postives = 140/226 (61.95%), Query Frame = 2
Query:   17 YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCG-TSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 685
            Y P     +PDS+D+RKKG V  VK+QG CGSCWAFS+  A+EG  K  TG L++LS Q LVDC  S N GC GG M  AF+++  NGGID+ED YPY   D SC  Y   AK      Y ++P+ +EKAL++AVA   PVSV+I+    +FQ Y  G+ +   C   +++H V  VGYGT+ G  YWI+KNSWG SWG  GY+ + RN        CGI   AS+
Sbjct:  107 YTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDC-VSENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESC-MYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGNKYWIIKNSWGESWGNKGYVLLARN----KNNACGITNLASF 326          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.548e-53
Identity = 110/226 (48.67%), Postives = 141/226 (62.39%), Query Frame = 2
Query:   17 YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 685
            Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+ED YPY   D SC  Y    K      Y ++P  +EKAL++AVA   P+SVAI+    +FQ Y  G+ +   C + +L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  108 YIPDWESRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 327          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 1.458e-52
Identity = 113/223 (50.67%), Postives = 138/223 (61.88%), Query Frame = 2
Query:   41 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 685
            LP SVDWRKKG V  VK+Q  CGSCWAFS   A+EG     TG L+SLSEQ LVDC     N+GCNGG M  AF+++ +NGG+D+E+ YPY A+D  C  YR    V     +  V    EKAL KAVA   P+SVA++ G  +FQ Y+SGI F   C + +LDHGV  VGYG E    N + YW+VKNSWG  WG  GY++    +A      CGIA  ASY
Sbjct:  114 LPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEIC-KYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVK----IAKDKNNHCGIATAASY 331          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.904e-52
Identity = 110/226 (48.67%), Postives = 141/226 (62.39%), Query Frame = 2
Query:   17 YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 685
            Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+ED YPY   + SC  Y    K      Y ++P  +EKAL++AVA   PVSVAI+    +FQ Y  G++    C + +L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  107 YIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 326          
The following BLAST results are available for this feature:
BLAST of CX295770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
CATL1_HUMAN2.035e-5452.25Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
CATL1_RAT4.533e-5451.12Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CATL1_BOVIN7.732e-5451.12Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CATL1_PIG1.319e-5350.22Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATL1_CANFA1.319e-5350.90Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATL2_BOVIN8.548e-5350.67Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATK_RAT8.548e-5348.23Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATK_CANFA8.548e-5348.67Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CATL2_HUMAN1.458e-5250.67Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CATK_HUMAN1.904e-5248.67Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05075G01SK DroRLeaf1 Citrus clementina cDNA clone C05075G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295770 ID=CX295770; Name=CX295770; organism=Citrus clementina; type=EST; length=687bp
AAAGAGGAGCGATCGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACT
CTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGA
AGCTGTGGGAGTTGCTGGGCATTTTCAACCATTGCTGCTGTAGAGGGTAT
AAACAAGATTGTTACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGG
TGGATTGTGATACATCATATAATGAAGGATGTAATGGTGGTTTGATGGAC
TATGCATTCGAGTTCATTATTGATAATGGAGGTATTGACACAGAAGATGA
TTACCCCTACAAAGCCATTGATGGTAGCTGTGACACATATCGGAAAAATG
CCAAAGTAGTTACAATTGATGACTATGAAGATGTTCCCCTAAATGACGAG
AAAGCTTTGCAAAAGGCAGTTGCAAATCAACCCGTGAGTGTTGCGATTGA
AGGAGGTGGCATGGCATTCCAGTTATATGAATCGGGTATATTTACGGGAA
GATGTGGGACATCTCTGGACCATGGTGTTACTGCTGTTGGATATGGCACA
GAAAATGGAGCTGATTACTGGATTGTGAAGAATTCATGGGGCAGTAGCTG
GGGAGAGGGTGGCTATATTAGGATGGAGCGTAACGTGGCTGGCACTCTCA
CGGGCAAGTGTGGAATTGCCATGGAGGCCTCATATCC
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