CX295772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_CYAP4 (50S ribosomal protein L19 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.951e-11 Identity = 35/97 (36.08%), Postives = 58/97 (59.79%), Query Frame = 3 Query: 396 RAIEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 R++EA + + +P+I GD V++ + + E N+ R Y+GIV++++N VE VF L+SP ++ IK++ KVRRA+LYYLR+ Sbjct: 8 RSLEAEQLKSNLPEIHVGDTVKVGVIIQEGNKERTQPYEGIVIAKRNSGINATITVRRIFQGVGVERVFLLHSPRVESIKIIKRGKVRRAKLYYLRD 104
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_CARHZ (50S ribosomal protein L19 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rplS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.951e-11 Identity = 35/97 (36.08%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 396 RAIEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 +++E + + +P+ R GD V++ +V E NR R+ Y+G+V+ ++ VE FPL+SP I++I+V+ KVRRARLYYLR+ Sbjct: 5 KSLEEEQLRKDLPEFRPGDTVKVYFKVIEGNRERIQPYEGVVIRKRGSGLSATFTVRRVSYGIGVERTFPLHSPRIEKIEVIRRGKVRRARLYYLRK 101
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_THISH (50S ribosomal protein L19 OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=rplS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = 3 Query: 402 IEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 +EA + R +PD GD V ++++V E NR RL ++G+V++++N VE VF YSP + EI+V VRRA+LYYLR+ Sbjct: 8 LEAEQMNREVPDFTPGDTVVVQVKVKEGNRERLQAFEGVVIAKRNRGLNSAFTVRKISHGEGVERVFQTYSPAVAEIQVKRRGSVRRAKLYYLRD 102
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_SPHWW (50S ribosomal protein L19 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=rplS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 38/99 (38.38%), Postives = 53/99 (53.54%), Query Frame = 3 Query: 387 LNKRAIEASESERPIPDIRTGDVVEIKLEVPENRR-RLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLR 680 L I + + IPD R GD + + ++V E R R+ Y+G+ ++R N VE VFPLYSPN++ I+VV VRRA+LYYLR Sbjct: 7 LEAEQIAKFKESKSIPDFRPGDTLRVGVKVVEGERTRVQAYEGVCIARANKGMGSSFTVRKISFGEGVERVFPLYSPNVESIEVVRKGVVRRAKLYYLR 105
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_HELMI (50S ribosomal protein L19 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=rplS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 36/97 (37.11%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 396 RAIEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 R IEA + + IPD + GD V++ ++V E NR R+ +++GIV+ R+ VE F ++SP + +I+VV +VRRA+LYYLR+ Sbjct: 6 RQIEAEQLRKDIPDFKPGDTVKVHVKVVEGNRERIQLFEGIVIKRRGGGLSETFTVRRVSYGVAVERTFLVHSPRLDKIEVVRRGRVRRAKLYYLRD 102
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_CLOBM (50S ribosomal protein L19 OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=rplS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 37/97 (38.14%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 396 RAIEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 +AIEA + +P+ GD V++ ++ E R R+ I++G V+ RQN VE FP+ SP I++I+VV KVRRA+LYYLR+ Sbjct: 6 KAIEAEQVRNDLPEFHVGDTVKVHQKIKEGTRERVQIFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPLIEKIQVVRKGKVRRAKLYYLRD 102
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_SALAI (50S ribosomal protein L19 OS=Salinispora arenicola (strain CNS-205) GN=rplS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 3 Query: 378 MGILNKRAIEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 M IL+ A++A +PD R GD V++ V E NR R+ I++G+V+ RQ VE +P+ SP I I+VV+ VRRA+LYYLRE Sbjct: 1 MNILD--ALDAQSKRTDLPDFRAGDTVKVHARVVEGNRSRVQIFQGVVIRRQGDGLRETFLVRKISFGVGVERTYPINSPAIDRIEVVTRGDVRRAKLYYLRE 101
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_GRABC (50S ribosomal protein L19 OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=rplS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 37/89 (41.57%), Postives = 50/89 (56.18%), Query Frame = 3 Query: 417 SERPIPDIRTGDVVEIKLEVPENRR-RLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLR 680 SERP+P+ GD + + ++V E R R ++G+ ++R N VE VFPLYSP I EI+VV VRRA+LYYLR Sbjct: 17 SERPVPEFVPGDTLRVLVKVVEGERTRTQAFEGVCIARSNRGVNSNFTIRKISYGEGVERVFPLYSPTIAEIQVVRRGDVRRAKLYYLR 105
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_CLOTH (50S ribosomal protein L19 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=rplS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 3 Query: 396 RAIEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 +AIE + ++ +PD GD V + ++V E NR R+ ++G V++++ VE +FP++SP + I+V+ KVRRA+LYYLRE Sbjct: 5 KAIEQEQLKKDVPDFSIGDYVRVNVKVKEGNRERIQAFEGTVIAKKGSGISETFTVRKISYGVGVERIFPVHSPRVAGIEVIRKGKVRRAKLYYLRE 101
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_ANATD (50S ribosomal protein L19 OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=rplS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 36/97 (37.11%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 396 RAIEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 R IE+ + IPD + GD V + +V E R R+ ++G+V+ R+ VE VFPL+SP +++I+V+ KVRRA+LYY+RE Sbjct: 5 REIESEMLRKDIPDFKPGDTVRVYFKVIEGGRERVQAFEGLVIKRRGKGLSETFTVRRISYGIGVERVFPLHSPRLEKIEVIRRGKVRRAKLYYIRE 101 The following BLAST results are available for this feature:
BLAST of CX295772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295772 ID=CX295772; Name=CX295772; organism=Citrus clementina; type=EST; length=707bpback to top |