CX295772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RK19_MESVI (50S ribosomal protein L19, chloroplastic OS=Mesostigma viride GN=rpl19 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 36/95 (37.89%), Postives = 58/95 (61.05%), Query Frame = 3 Query: 402 IEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 IEA++ + +P+I GD V++ L + E N+ R+ Y+G+V+++ N VE +F ++SP I I+V+S+ KVRRA+LYYLRE Sbjct: 10 IEANQIKANLPNIYVGDYVKVGLLIQEGNKERVQPYEGVVIAKHNSASNSTITVRKMFQGIGVERIFLIHSPRITSIEVISNSKVRRAKLYYLRE 104
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_STRMU (50S ribosomal protein L19 OS=Streptococcus mutans GN=rplS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 35/96 (36.46%), Postives = 55/96 (57.29%), Query Frame = 3 Query: 396 RAIEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLR 680 +++ S+ IP+ R GD V + +V E NR R+ I++G+V+SR+ VE FP ++P +++I+V H KVRRA+LYYLR Sbjct: 6 QSLTESQLRTDIPNFRPGDTVRVHAKVVEGNRERVQIFEGVVISRKGQGISEMYTVRKISSGVGVERTFPTHTPRVEKIEVTRHGKVRRAKLYYLR 101
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_SALTO (50S ribosomal protein L19 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=rplS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 3 Query: 378 MGILNKRAIEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 M IL+ A++A +PD R GD V++ V E NR R+ I++G+V+ RQ VE +P+ SP I I+VV+ VRRA+LYYLRE Sbjct: 1 MNILD--ALDAQSKRTDLPDFRAGDTVKVHARVVEGNRSRVQIFQGVVIRRQGDGLRETFLVRKISFGVGVERTYPVNSPAIDRIEVVTRGDVRRAKLYYLRE 101
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_RHIEC (50S ribosomal protein L19 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=rplS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 35/91 (38.46%), Postives = 52/91 (57.14%), Query Frame = 3 Query: 414 ESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 E++R +P+ GD V + ++V E NR R+ Y+G+ ++R VE VFP+YSP I+ + VV KVRRA+LYYLR+ Sbjct: 16 EAKRTLPEFSPGDTVRVNVKVTEGNRTRVQAYEGVCIARSGGGLQENFTVRKISYGEGVERVFPVYSPMIESVDVVRRGKVRRAKLYYLRD 106
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_PARDP (50S ribosomal protein L19 OS=Paracoccus denitrificans (strain Pd 1222) GN=rplS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 37/88 (42.05%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 423 RPIPDIRTGDVVEIKLEVPENRR-RLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 + IPD + GD V + +V E R R+ +Y+G+V+SR+ VE VFPLYS NI I VV +VRRA+LYYLR+ Sbjct: 17 KDIPDFKAGDTVRVGYKVTEGTRTRVQMYEGVVISRKGGGIGASFTVRKISFGEGVERVFPLYSTNIDSITVVRRGRVRRAKLYYLRD 104
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_GLUOX (50S ribosomal protein L19 OS=Gluconobacter oxydans GN=rplS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 38/96 (39.58%), Postives = 52/96 (54.17%), Query Frame = 3 Query: 396 RAIEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLR 680 R IE R +P+ GD V + + V E R R+ ++G+V++R N VE VFPLY+P+I I+VV KVRRA+LYYLR Sbjct: 10 REIERLSGVRAVPEFIAGDTVRVGVRVVEGTRERVQSFEGVVIARSNKGLNSNFTVRKISNGEGVERVFPLYAPSIASIEVVRRGKVRRAKLYYLR 105
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_GEOSM (50S ribosomal protein L19 OS=Geobacter sp. (strain M21) GN=rplS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 34/96 (35.42%), Postives = 60/96 (62.50%), Query Frame = 3 Query: 399 AIEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 AIE ++ ++ IP GD +++++++ E ++ R+ ++G+ + RQN VE VFPL+SP+I+ I+VV+ +VRRA+LYYLR+ Sbjct: 6 AIEMAQMKKNIPKFIPGDTIKVQVKIVEGDKSRIQAFQGVCLGRQNGGIRESFTVRKISNGVGVERVFPLHSPSIEAIEVVTRGQVRRAKLYYLRK 101
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_GEOBB (50S ribosomal protein L19 OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=rplS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 34/96 (35.42%), Postives = 60/96 (62.50%), Query Frame = 3 Query: 399 AIEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 AIE ++ ++ IP GD +++++++ E ++ R+ ++G+ + RQN VE VFPL+SP+I+ I+VV+ +VRRA+LYYLR+ Sbjct: 6 AIEMAQMKKNIPKFIPGDTIKVQVKIVEGDKSRIQAFQGVCLGRQNGGIRESFTVRKISNGVGVERVFPLHSPSIEAIEVVTRGQVRRAKLYYLRK 101
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_CORK4 (50S ribosomal protein L19 OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=rplS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 36/102 (35.29%), Postives = 61/102 (59.80%), Query Frame = 3 Query: 378 MGILNKRAIEASESERPIPDIRTGDVVEIKLEVPENRR-RLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLR 680 M IL+K ++A+ IP+ R+GD V++ ++V E ++ R+ +++G+V+ RQ VE FP+++PNI I+V++ VRRA+LYYLR Sbjct: 1 MNILDK--VDAASLRDDIPEFRSGDTVDVHVKVIEGQKSRIQVFRGVVIRRQGSGVRETFTVRKVSFGIGVERTFPVHTPNIDHIEVLTRGDVRRAKLYYLR 100
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_CLOBL (50S ribosomal protein L19 OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=rplS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 36/97 (37.11%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 396 RAIEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 +AIEA + +P+ GD V++ ++ E R R+ +++G V+ RQN VE FP+ SP I++I+VV KVRRA+LYYLR+ Sbjct: 6 KAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPLIEKIQVVRKGKVRRAKLYYLRD 102 The following BLAST results are available for this feature:
BLAST of CX295772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295772 ID=CX295772; Name=CX295772; organism=Citrus clementina; type=EST; length=707bpback to top |