CX295772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_CLOBK (50S ribosomal protein L19 OS=Clostridium botulinum (strain Okra / Type B1) GN=rplS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 36/97 (37.11%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 396 RAIEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 +AIEA + +P+ GD V++ ++ E R R+ +++G V+ RQN VE FP+ SP I++I+VV KVRRA+LYYLR+ Sbjct: 6 KAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPLIEKIQVVRKGKVRRAKLYYLRD 102
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_CLOBJ (50S ribosomal protein L19 OS=Clostridium botulinum (strain Kyoto / Type A2) GN=rplS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 36/97 (37.11%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 396 RAIEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 +AIEA + +P+ GD V++ ++ E R R+ +++G V+ RQN VE FP+ SP I++I+VV KVRRA+LYYLR+ Sbjct: 6 KAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPLIEKIQVVRKGKVRRAKLYYLRD 102
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_CLOBH (50S ribosomal protein L19 OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=rplS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 36/97 (37.11%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 396 RAIEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 +AIEA + +P+ GD V++ ++ E R R+ +++G V+ RQN VE FP+ SP I++I+VV KVRRA+LYYLR+ Sbjct: 6 KAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPLIEKIQVVRKGKVRRAKLYYLRD 102
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_CLOB6 (50S ribosomal protein L19 OS=Clostridium botulinum (strain 657 / Type Ba4) GN=rplS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 36/97 (37.11%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 396 RAIEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 +AIEA + +P+ GD V++ ++ E R R+ +++G V+ RQN VE FP+ SP I++I+VV KVRRA+LYYLR+ Sbjct: 6 KAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPLIEKIQVVRKGKVRRAKLYYLRD 102
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_CLOB1 (50S ribosomal protein L19 OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=rplS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 36/97 (37.11%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 396 RAIEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 +AIEA + +P+ GD V++ ++ E R R+ +++G V+ RQN VE FP+ SP I++I+VV KVRRA+LYYLR+ Sbjct: 6 KAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPLIEKIQVVRKGKVRRAKLYYLRD 102
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_ACIC1 (50S ribosomal protein L19 OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=rplS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 35/95 (36.84%), Postives = 56/95 (58.95%), Query Frame = 3 Query: 402 IEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 ++AS IPD R GD +++ + V E NR R+ +++G+V+ RQ VE FP+++P I++I+VV+ VRRA+LYYLR+ Sbjct: 7 VDASSLRTDIPDFRPGDTLKVHVRVVEGNRSRVQVFQGVVIRRQGSGVRETFTVRKVSFGVGVERTFPVHTPVIEKIEVVTRGHVRRAKLYYLRD 101
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_STRE4 (50S ribosomal protein L19 OS=Streptococcus equi subsp. equi (strain 4047) GN=rplS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 34/85 (40.00%), Postives = 52/85 (61.18%), Query Frame = 3 Query: 429 IPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLR 680 IP R GD V + +V E +R R+ I++G+V+SR++ VE FP+++P +++I+VV H KVRRA+LYYLR Sbjct: 17 IPSFRPGDTVRVHAKVVEGSRERIQIFEGVVISRKSQGISEMYTVRKISSGIGVERTFPIHTPRVEKIEVVRHGKVRRAKLYYLR 101
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_RHIE6 (50S ribosomal protein L19 OS=Rhizobium etli (strain CIAT 652) GN=rplS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 35/91 (38.46%), Postives = 52/91 (57.14%), Query Frame = 3 Query: 414 ESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 E++R +P+ GD V + ++V E NR R+ Y+G+ ++R VE VFP+YSP I+ + VV KVRRA+LYYLR+ Sbjct: 16 EAKRTLPEFSPGDTVRVNVKVTEGNRTRVQAYEGVCIARSGGGLQENFTVRKISYGEGVERVFPVYSPLIESVDVVRRGKVRRAKLYYLRD 106
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_MARMM (50S ribosomal protein L19 OS=Maricaulis maris (strain MCS10) GN=rplS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 32/89 (35.96%), Postives = 51/89 (57.30%), Query Frame = 3 Query: 420 ERPIPDIRTGDVVEIKLEVPENRR-RLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 E+ IPD GD + + + + E R R+ +++G+ ++R VE VFPLYSPN+++I++ KVRRA+LYYLR+ Sbjct: 18 EKTIPDFSAGDTLRVHVRIKEGERERIQVFEGVCIARNGGGLNESYTVRKISFGEGVERVFPLYSPNVEQIEIKRKGKVRRAKLYYLRD 106
BLAST of CX295772 vs. ExPASy Swiss-Prot
Match: RL19_BACLD (50S ribosomal protein L19 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rplS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 34/86 (39.53%), Postives = 51/86 (59.30%), Query Frame = 3 Query: 429 IPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRE 683 +P R GD + + ++V E NR R+ +++G+V+ R+ VE FPL++P I +I+VV H KVRRA+LYYLRE Sbjct: 17 LPAFRPGDTLRVHVKVVEGNRERIQVFEGVVIKRRGGGISETFTVRKISYGVGVERTFPLHTPKIAKIEVVRHGKVRRAKLYYLRE 102 The following BLAST results are available for this feature:
BLAST of CX295772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295772 ID=CX295772; Name=CX295772; organism=Citrus clementina; type=EST; length=707bpback to top |