CX295774

Overview
NameCX295774
Unique NameCX295774
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX295774_ssr87 microsatellite CX295774_ssr87:87..98. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig11659 contig Ccv1_Contig11659:14..730. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: GTR10_HUMAN (Solute carrier family 2, facilitated glucose transporter member 10 OS=Homo sapiens GN=SLC2A10 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.213e-12
Identity = 46/150 (30.67%), Postives = 73/150 (48.67%), Query Frame = 2
Query:  245 AILASMTSILLGYDIGVMSGAALYIKDDFKVSDTKIEILIGILNIFSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSNYP 694
            A ++ +  +  GY++ V+SGA L ++ DF +S  + E L+G L + +L+ SL  G   D  GR+  I+                 + A+L+ GR V G  +  +++   +Y +EL     RG L S  E  I  GILL Y  NY  +  P
Sbjct:   12 ASVSLLGGLTFGYELAVISGALLPLQLDFGLSCLEQEFLVGSLLLGALLASLVGGFLIDCYGRKQAILGSNLVLLAGSLTLGLAGSLAWLVLGRAVVGFAISLSSMACCIYVSELVGPRQRGVLVSLYEAGITVGILLSYALNYALAGTP 161          
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: MSSP1_ARATH (Monosaccharide-sensing protein 1 OS=Arabidopsis thaliana GN=MSSP1 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.702e-12
Identity = 44/159 (27.67%), Postives = 75/159 (47.17%), Query Frame = 2
Query:  233 ASGAAILASMTSILLGYDIGVMSGAALYIKDDFKVSDTKIEILIGILNIFSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGY--VSNYGFSNYPSLR 703
            A+  A+ A++ + L G+D   ++GA +YI  D  +  +   +++ +  I + + +  +G  SDW+GRR  ++                 N   L   R + G G G A  + PVY +E +P   RG L + P+   +GG+ L Y  V     S+ PS R
Sbjct:    4 ATLVALAATIGNFLQGWDNATIAGAMVYINKDLNLPTSVQGLVVAMSLIGATVITTCSGPISDWLGRRPMLILSSVMYFVCGLIMLWSPNVYVLCFARLLNGFGAGLAVTLVPVYISETAPPEIRGQLNTLPQFLGSGGMFLSYCMVFTMSLSDSPSWR 162          
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: XYLL3_ARATH (D-xylose-proton symporter-like 3 OS=Arabidopsis thaliana GN=At5g59250 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = 2
Query:  248 ILASMTSILLGYDIGVMSGAALYIKDD-------FKVSDTKIEILIGILNIFSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGY 664
            I  ++  +L GYDIG  SGA L ++         F  S  ++ +++      +L+GS++    +D++GRR  ++                 +   L+ GR + G G+G A   AP+Y AE  P+  RG L S  E+FI  GILLG+
Sbjct:  103 IFPALGGLLFGYDIGATSGATLSLQSPALSGTTWFNFSPVQLGLVVSGSLYGALLGSISVYGVADFLGRRRELIIAAVLYLLGSLITGCAPDLNILLVGRLLYGFGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGF 248          
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: ITR1_SCHPO (Myo-inositol transporter 1 OS=Schizosaccharomyces pombe GN=itr1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12
Identity = 49/185 (26.49%), Postives = 88/185 (47.57%), Query Frame = 2
Query:  143 GAKSNNNTDPQNQKTLADFDPQKKPKRNLYASGAAILASMTSILLGYDIGVMSGAALYIKDDF---KVSDTKIEILIGILNIFSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSN 688
            GA+S +N++    +  A  D  +    + +    A  A +  +L GYD GV+SGA + I       ++++   E +    ++ +L+G + AG  +D+ GR+  I                  +   ++ GRFV G GVG A+LI P+Y +E++P+  RG L     + I  G ++ Y  +  F +
Sbjct:   57 GARSRSNSNISLSEPHALNDTVEDQPVSKWVWVLAFAAGIGGLLFGYDTGVISGALVVIGTSLGGHELTNGGKEFITSATSLGALLGGIIAGALADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGIASLIIPLYLSEIAPSKIRGRLVIIYVLLITAGQVIAYGIDTAFEH 241          
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: IOLT_BACSU (Major myo-inositol transporter iolT OS=Bacillus subtilis GN=iolT PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12
Identity = 43/144 (29.86%), Postives = 72/144 (50.00%), Query Frame = 2
Query:  248 ILASMTSILLGYDIGVMSGAALYI--KDDFKVSDTKIEILIGILNIFSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSN 673
            ++++   +L GYD GV++GA  Y+   D   ++     ++   L   + +G++  GR SD+ GRR  I+                 N   ++  RFV G+ VG A++  P Y AE+SP  +RG + +  E+ I  G LL +V N
Sbjct:   16 LVSTFGGLLFGYDTGVLNGALPYMGEPDQLNLNAFTEGLVTSSLLFGAALGAVFGGRMSDFNGRRKNILFLAVIFFISTIGCTFAPNVTVMIISRFVLGIAVGGASVTVPAYLAEMSPVESRGRMVTQNELMIVSGQLLAFVFN 159          
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: HXT5_YEAST (Probable glucose transporter HXT5 OS=Saccharomyces cerevisiae GN=HXT5 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.027e-11
Identity = 48/178 (26.97%), Postives = 83/178 (46.63%), Query Frame = 2
Query:  206 QKKPKRNL-YASGAAILASMTSILLGYDIGVMSGAALYIKDDF-------------KVSDTKIEILIGILNIFSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTN--YAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSNY 691
            +KK K +L + S   ++ +    + G+D G +SG     + DF              +SD +  +++ I NI   IG +   +  D  GR+  ++                 +  Y + +G R ++G+GVG   ++AP+  +E+SP   RG L S  ++ I  GI LGY +N+G  NY
Sbjct:   76 EKKSKSDLLFVSVCCLMVAFGGFVFGWDTGTISGFVR--QTDFIRRFGSTRANGTTYLSDVRTGLMVSIFNIGCAIGGIVLSKLGDMYGRKIGLMTVVVIYSIGIIIQIASIDKWYQYFIG-RIISGLGVGGITVLAPMLISEVSPKQLRGTLVSCYQLMITFGIFLGYCTNFGTKNY 250          
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: RAG1_KLULA (Low-affinity glucose transporter OS=Kluyveromyces lactis GN=RAG1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11
Identity = 47/186 (25.27%), Postives = 83/186 (44.62%), Query Frame = 2
Query:  179 QKTLADFDPQKKPKRNLYASGAAILASMTSILLGYDIGVMSGAALYIKDDFK-------------VSDTKIEILIGILNIFSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTN--YAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSNY 691
            +KT  +   QK  K  ++ S   ++ +    + G+D G +SG     + DF              +S+ +  +++ I NI   +G +      D  GRR  ++                 +  Y + +G R ++G+GVG   +++P+  +E +P   RG L S  ++ I  GI LGY +NYG  NY
Sbjct:   45 EKTAEETLQQKPAKEYIFVSLCCVMVAFGGFVFGWDTGTISG--FVNQTDFLRRFGQEKADGSHYLSNVRTGLIVSIFNIGCAVGGIVLSNIGDRWGRRIGLITVIIIYVIGIIIQIASVDKWYQYFIG-RIISGLGVGGITVLSPMLISETAPKHLRGTLVSCYQLMITFGIFLGYCTNYGTKNY 227          
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: GTR10_MOUSE (Solute carrier family 2, facilitated glucose transporter member 10 OS=Mus musculus GN=Slc2a10 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11
Identity = 47/161 (29.19%), Postives = 77/161 (47.83%), Query Frame = 2
Query:  212 KPKRNLYASGAAILASMTSILLGYDIGVMSGAALYIKDDFKVSDTKIEILIGILNIFSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSNYP 694
            +P   L  +  ++L  +T    GY++ V+SGA L ++ +F +S  + E+L+G L + +L+ SL  G   D  GRR  I+                ++  +L+ GR   G  +  +++   +Y +EL     RG L S  EV I  GIL  Y  NY  +  P
Sbjct:    4 RPAVLLLCASVSLLGGLT---FGYELAVISGALLPLQLNFGLSCLEQELLVGSLLLGALLASLVGGFLIDCYGRRRAILGSNAVLLAGSLILGLASSLPWLLLGRLSVGFAISLSSMACCIYVSELVGPRQRGVLVSLYEVGITVGILFSYGLNYVLAGSP 161          
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: PLST4_ARATH (Plastidic glucose transporter 4 OS=Arabidopsis thaliana GN=At5g16150 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.751e-11
Identity = 41/150 (27.33%), Postives = 73/150 (48.67%), Query Frame = 2
Query:  251 LASMTSILLGYDIGVMSGAALYIKDDFKVSDTKI--EILIGILNIFSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSNYP 694
            +A + +IL GY +GV++GA  Y+  D  +++  +    ++  L   + +GS   G  +D  GR  T                   +   ++ GR +AG+G+G ++ I P+Y +E+SP   RG L S  ++FI  GIL   ++    +  P
Sbjct:  111 VACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGALADKFGRTRTFQLDAIPLAIGAFLCATAQSVQTMIVGRLLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICIGILAALIAGLPLAANP 260          
BLAST of CX295774 vs. ExPASy Swiss-Prot
Match: KHT2_KLULA (Hexose transporter 2 OS=Kluyveromyces lactis GN=KHT2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.751e-11
Identity = 51/198 (25.76%), Postives = 86/198 (43.43%), Query Frame = 2
Query:  143 GAKSNNNTDPQNQKTLADFDPQKKPKRNLYASGAAILASMTSILLGYDIGVMSGAALYIKDDF-------------KVSDTKIEILIGILNIFSLIGSLAAGRTSDWIGRRY--TIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGVGVGYAALIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSNY 691
            G++ +   D  N    A   P+K     +  S   ++ +    + G+D G +SG     + DF              +S+ +  +++ I NI   IG +   +  D  GRR    IV                  Y + +G R ++G+GVG  ++++P+  +E +P   RG L SF ++ I  GI LGY +NYG   Y
Sbjct:   32 GSRDDLKVDDDNHSVDAIELPKKPRSAYITVSILCLMVAFGGFVFGWDTGTISG--FVNQTDFIRRFGQEKADGSHYLSNVRTGLIVSIFNIGCAIGGIILSKLGDMYGRRIGLMIVVLIYVVGIIIQIASIDKWYQYFIG-RIISGLGVGGISVLSPMLISETAPKHIRGTLVSFYQLMITFGIFLGYCTNYGTKTY 226          
The following BLAST results are available for this feature:
BLAST of CX295774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
GTR10_HUMAN1.213e-1230.67Solute carrier family 2, facilitated glucose trans... [more]
MSSP1_ARATH2.702e-1227.67Monosaccharide-sensing protein 1 OS=Arabidopsis th... [more]
XYLL3_ARATH3.529e-1230.82D-xylose-proton symporter-like 3 OS=Arabidopsis th... [more]
ITR1_SCHPO6.019e-1226.49Myo-inositol transporter 1 OS=Schizosaccharomyces ... [more]
IOLT_BACSU6.019e-1229.86Major myo-inositol transporter iolT OS=Bacillus su... [more]
HXT5_YEAST1.027e-1126.97Probable glucose transporter HXT5 OS=Saccharomyces... [more]
RAG1_KLULA1.341e-1125.27Low-affinity glucose transporter OS=Kluyveromyces ... [more]
GTR10_MOUSE1.341e-1129.19Solute carrier family 2, facilitated glucose trans... [more]
PLST4_ARATH1.751e-1127.33Plastidic glucose transporter 4 OS=Arabidopsis tha... [more]
KHT2_KLULA1.751e-1125.76Hexose transporter 2 OS=Kluyveromyces lactis GN=KH... [more]

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Properties
Property NameValue
Genbank descriptionC05075G05SK DroRLeaf1 Citrus clementina cDNA clone C05075G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295774 ID=CX295774; Name=CX295774; organism=Citrus clementina; type=EST; length=716bp
GGCTTCTTGTTTTTGTAGTAGTTTCATGGCAGCTTGAGTTTCTATCTCTT
CTTCCAACCCTAGCTTATATAATTAAACACTCGCAGTCTCTCTCTCTCGC
TCTCTGGCTAGCTAGCTTAGCAACAACATGGCTGCAGGCTTGGGAGCCAA
GAGCAACAACAATACTGACCCTCAAAACCAAAAAACTCTTGCGGATTTTG
ATCCCCAAAAGAAACCAAAAAGAAATCTGTATGCCTCCGGCGCTGCCATT
TTGGCTTCCATGACTTCAATCTTACTAGGTTATGACATTGGAGTAATGAG
TGGAGCTGCACTCTACATCAAAGACGACTTTAAAGTCAGTGACACAAAAA
TCGAGATCTTAATTGGAATCTTGAATATTTTCTCACTCATCGGCTCACTG
GCCGCCGGCAGAACCTCCGACTGGATTGGCCGCCGGTACACTATCGTGTT
AGCCGGGGCCATCTTCTTCGCCGGAGCGCTGCTCATGGGGTTTGCCACAA
ACTATGCTTTCCTCATGGGGGGTCGCTTCGTCGCCGGCGTCGGCGTCGGA
TACGCTGCATTGATCGCTCCCGTATACACAGCTGAACTCTCTCCGGCTTC
CACTCGAGGCTTTCTCACCTCATTTCCTGAGGTTTTCATTAACGGCGGGA
TATTACTTGGCTACGTCTCGAACTACGGATTCTCCAACTACCCCTCACTT
AGGCTGGCGCATGATG
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