CX295821

Overview
NameCX295821
Unique NameCX295821
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length663
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_SHIFL (Hydroxyacylglutathione hydrolase OS=Shigella flexneri GN=gloB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.086e-12
Identity = 43/135 (31.85%), Postives = 68/135 (50.37%), Query Frame = 1
Query:  256 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFS 660
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVITTPGHTLGHICYF--SKPYLFCGDTLFS 131          
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_SHIF8 (Hydroxyacylglutathione hydrolase OS=Shigella flexneri serotype 5b (strain 8401) GN=gloB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.086e-12
Identity = 43/135 (31.85%), Postives = 68/135 (50.37%), Query Frame = 1
Query:  256 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFS 660
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVITTPGHTLGHICYF--SKPYLFCGDTLFS 131          
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_SHIBS (Hydroxyacylglutathione hydrolase OS=Shigella boydii serotype 4 (strain Sb227) GN=gloB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.086e-12
Identity = 43/135 (31.85%), Postives = 68/135 (50.37%), Query Frame = 1
Query:  256 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFS 660
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVITTPGHTLGHICYF--SKPYLFCGDTLFS 131          
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_KLEP3 (Hydroxyacylglutathione hydrolase OS=Klebsiella pneumoniae (strain 342) GN=gloB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.086e-12
Identity = 42/131 (32.06%), Postives = 66/131 (50.38%), Query Frame = 1
Query:  271 VPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVI-GSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFS 660
            +P  +DNY ++L + + G   +VDP EA PV+ A+         I              +L+ ++ + V+ G    +D+  G+  VL DGD+    GH+  +  TPGHT GHI +Y      +F GDT+FS
Sbjct:    6 IPAFQDNYIWVLSE-NNGRCIIVDPGEAAPVLAAIEENQWQPEAILLTHHHQDHVGGVKQLREKFPSIVVYGPAETQDK--GVTQVLGDGDRLSILGHDFSIFSTPGHTLGHICYY--SEPYLFCGDTMFS 131          
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_DECAR (Hydroxyacylglutathione hydrolase OS=Dechloromonas aromatica (strain RCB) GN=gloB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.086e-12
Identity = 48/134 (35.82%), Postives = 65/134 (48.51%), Query Frame = 1
Query:  256 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLF 657
            L+I  +P  +DNY +LL       V  VDP +A PV+  L      L  I              ELKAR+ A+V   G   + I G    L+ G+     G +V V+  PGHT GH+++Y PG  A+  GDTLF
Sbjct:    2 LEISFIPAFKDNYIWLLTRGKRAFV--VDPGDAAPVLARLEAGGLMLEGILITHHHADHQGGVAELKARWQAEVYAPG--NESITGCSCPLSGGESIDVLGQKVTVMAVPGHTLGHLAYYAPG--ALLCGDTLF 129          
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_SHISS (Hydroxyacylglutathione hydrolase OS=Shigella sonnei (strain Ss046) GN=gloB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.031e-12
Identity = 43/135 (31.85%), Postives = 68/135 (50.37%), Query Frame = 1
Query:  256 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFS 660
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFS 131          
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_SHIDS (Hydroxyacylglutathione hydrolase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=gloB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.031e-12
Identity = 43/135 (31.85%), Postives = 68/135 (50.37%), Query Frame = 1
Query:  256 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFS 660
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFS 131          
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_SHIB3 (Hydroxyacylglutathione hydrolase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=gloB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.031e-12
Identity = 43/135 (31.85%), Postives = 68/135 (50.37%), Query Frame = 1
Query:  256 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFS 660
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFS 131          
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_SERP5 (Hydroxyacylglutathione hydrolase OS=Serratia proteamaculans (strain 568) GN=gloB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.031e-12
Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = 1
Query:  271 VPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARY-GAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFS 660
            +P  +DNY +LL D   G   +VDP EA PV++ L R N     I              ++ ARY G KV G     D+  G + +++DG+     G +   I  PGHT GH++FY   +  +F GDT+FS
Sbjct:    6 IPAFQDNYIWLL-DNQQGHCIIVDPGEAQPVLETLDRLNLTPDAIVLTHHHHDHVGGVAQIVARYSGLKVYGPQETADK--GANHIVHDGETIEINGQKFATIAVPGHTLGHVAFY--SAPYLFCGDTIFS 131          
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_ESCF3 (Hydroxyacylglutathione hydrolase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=gloB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.031e-12
Identity = 43/135 (31.85%), Postives = 68/135 (50.37%), Query Frame = 1
Query:  256 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFS 660
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVKKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFS 131          
The following BLAST results are available for this feature:
BLAST of CX295821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
GLO2_SHIFL3.086e-1231.85Hydroxyacylglutathione hydrolase OS=Shigella flexn... [more]
GLO2_SHIF83.086e-1231.85Hydroxyacylglutathione hydrolase OS=Shigella flexn... [more]
GLO2_SHIBS3.086e-1231.85Hydroxyacylglutathione hydrolase OS=Shigella boydi... [more]
GLO2_KLEP33.086e-1232.06Hydroxyacylglutathione hydrolase OS=Klebsiella pne... [more]
GLO2_DECAR3.086e-1235.82Hydroxyacylglutathione hydrolase OS=Dechloromonas ... [more]
GLO2_SHISS4.031e-1231.85Hydroxyacylglutathione hydrolase OS=Shigella sonne... [more]
GLO2_SHIDS4.031e-1231.85Hydroxyacylglutathione hydrolase OS=Shigella dysen... [more]
GLO2_SHIB34.031e-1231.85Hydroxyacylglutathione hydrolase OS=Shigella boydi... [more]
GLO2_SERP54.031e-1235.11Hydroxyacylglutathione hydrolase OS=Serratia prote... [more]
GLO2_ESCF34.031e-1231.85Hydroxyacylglutathione hydrolase OS=Escherichia fe... [more]

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Properties
Property NameValue
Genbank descriptionC05076C04SK DroRLeaf1 Citrus clementina cDNA clone C05076C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295821 ID=CX295821; Name=CX295821; organism=Citrus clementina; type=EST; length=663bp
ATTTTTTCACAAAGGAAGAGAGAGAGAGAGATGCAAATGATCTCCAGAGC
ATCATCTGCTGCCATGGCCTCCTTCACTTGTTCAAGGGGGCAGAGTGGCC
TTTGTGTTGTGCCAGGACCAAGACAACTTTGCCTTAGAAAGGGTCTTCTG
TATGGTTTCATGCGCTTATTATCAATGCCATTCAAGACATTGCATTTAGC
AAGTCGATCTCTTAGAGTTGCTGAGTTTTGCAGTATCTCCAATATGTCAT
CATCGTTGCAAATTGAGTTGGTACCGTGTCTCAGGGACAACTATGCATAT
CTTTTACATGACATGGACACAGGTACTGTTGGAGTTGTTGATCCTTCTGA
AGCTGTTCCTGTGATAGATGCTTTGAGTAGGAAAAACCGAAATCTGACTT
ACATTCTAAATACACATCATCATCATGATCACACCGGTGGTAATTTGGAG
CTAAAAGCTAGGTACGGTGCAAAGGTGATTGGTTCAGGAGTAGACAAGGA
TAGGATCCCTGGCATTGATATAGTTTTGAATGATGGAGACAAATGGATGT
TTGCTGGTCATGAGGTGCACGTGATTGATACGCCTGGCCATACCCGAGGT
CATATTAGCTTCTACTTTCCTGGATCAGCGGCAGTTTTTACTGGGGACAC
TTTGTTCAGCTTA
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