CX295847
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA1_RALSO (Serine hydroxymethyltransferase 1 OS=Ralstonia solanacearum GN=glyA1 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.268e-25 Identity = 67/168 (39.88%), Postives = 91/168 (54.17%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFP 504 I G AVA K+A +P +KAYQEQV+ N A+TL+ G +VSG TE+H++LV+L+ K I G EKVL HI NKN +P D V GIR+G+PA+T+RGF E + KVA+ + + ++ IA +R V E KQFP Sbjct: 267 IAGKAVAFKEAQSPTFKAYQEQVVKNARAMAETLMARGLRIVSGRTESHVMLVDLRAKSITGKEAEKVLGDAHITVNKNAIPNDPEKPFVTSGIRLGSPAMTTRGFKEGEAVKVAHL----------------------IADVLDNPHDEANIAAVRAKVAELTKQFP 412
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA_CUPTR (Serine hydroxymethyltransferase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=glyA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.869e-25 Identity = 65/171 (38.01%), Postives = 93/171 (54.39%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIG 513 I G AVA K+A TPE+KAYQ+QV+ N + A+TL+ G +VSG TE+H++LV+L+ K I G E++L H+ NKN +P D V GIR+G+PA+T+RGF EE+ + G + D + A + IA +R V K+FP G Sbjct: 267 IAGKAVAFKEALTPEFKAYQQQVVKNAAVLAETLIARGLRIVSGRTESHVMLVDLRAKNITGKEAERILGEAHLTVNKNAIPNDPEKPFVTSGIRVGSPAMTTRGFKEEE-------------------ARIVGNLIADVLDNPHDA---ANIAAVREQVSALTKRFPVYG 415
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA_HALHL (Serine hydroxymethyltransferase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=glyA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.600e-25 Identity = 63/172 (36.63%), Postives = 95/172 (55.23%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVA-TTQSANFQSEIAKLRHDVEEYAKQFPTIG 513 I G AVA K+A P++K YQEQV++N A+ ++E GY +VSGGT+NHL L++L K + G + L +I NKNTVP D S V G+R+GTPA+T+RGF E + T+L D++ + +S + ++R +VE+ ++FP G Sbjct: 268 IAGKAVAFKEALEPDFKQYQEQVVANARAMARRVIERGYNVVSGGTDNHLFLMDLTPKNLTGKDADAALGRANITVNKNTVPNDPQSPFVTSGLRIGTPAITTRGF-----------------------KEAEATRLADWICDVLDNMGDESVVERVRGEVEQICREFPVYG 416
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA_CLOD6 (Serine hydroxymethyltransferase OS=Clostridium difficile (strain 630) GN=glyA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.600e-25 Identity = 59/132 (44.70%), Postives = 84/132 (63.64%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVS-AMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSET 396 I AV K+A + E+K YQ QV N A+ L++ ++L+SGGT+NHL+L++L NK I G EK L+ +I ANKNT+P D + A+V GIR+GTPA+T+RG EED A +A D + + K+ T Sbjct: 264 IASKAVCFKEALSDEFKEYQVQVAKNAKALAEELIKRDFKLISGGTDNHLILLDLTNKNITGKAAEKRLDDAYITANKNTIPFDPNGALVTSGIRLGTPAVTTRGMKEEDMAIIAEAIDLCLTYDEESKART 395
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA_ACIAC (Serine hydroxymethyltransferase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=glyA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.600e-25 Identity = 57/110 (51.82%), Postives = 75/110 (68.18%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEED 330 I AVA K+A TPE+KAYQ+QV N FA+TL+E G ++SG TE+H++LV+L+ K I G E L HI NKN++P D MV GIR+GTPA+T+RGF EE+ Sbjct: 266 IAAKAVAFKEALTPEFKAYQQQVAKNAKVFAETLIERGLRIISGRTESHVMLVDLRAKGITGKAAEAALGQAHITINKNSIPNDPEKPMVTSGIRVGTPAITTRGFKEEE 375
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA_MYCMO (Serine hydroxymethyltransferase OS=Mycoplasma mobile GN=glyA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.620e-25 Identity = 59/170 (34.71%), Postives = 101/170 (59.41%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNK-RIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPT 507 I G AVA +A TP++K YQ+Q++SN F++ ++G +++SG T+NHL +++K+ I G +++ +++I ANKN++P D + + G+RMGTPA+T+RGF E +F K+A + + +A + S+N +S KL+++V E K FPT Sbjct: 263 IAGKAVAFGEALTPQFKKYQQQIISNAKAFSEEFKKVGTKIISGQTDNHLFTIDVKSSFNISGKEASELMHSINITANKNSIPNDTLGPKISSGVRMGTPAMTTRGFKEVEFKKLARI-------------------IIELLANSTSSNLESLKLKLKNEVLELTKAFPT 413
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA_COXBU (Serine hydroxymethyltransferase OS=Coxiella burnetii GN=glyA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.126e-24 Identity = 55/117 (47.01%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 351 I AVA K+A PE+K Y +Q+L N A+ + E GY +VSGGT+NHL LV+L +K I G E L +I NKNTVPG+ S V G+R+GTPA+T+RGF E++ +++A++ Sbjct: 268 IAAKAVAFKEAMQPEFKTYAQQILKNAKAMAEVMKERGYTIVSGGTQNHLFLVSLLDKNISGKEAEAALGRANITVNKNTVPGETRSPFVTSGLRIGTPAITTRGFKEKEASQLAHW 384
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA_COXBR (Serine hydroxymethyltransferase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=glyA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.126e-24 Identity = 55/117 (47.01%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 351 I AVA K+A PE+K Y +Q+L N A+ + E GY +VSGGT+NHL LV+L +K I G E L +I NKNTVPG+ S V G+R+GTPA+T+RGF E++ +++A++ Sbjct: 268 IAAKAVAFKEAMQPEFKTYAQQILKNAKAMAEVMKERGYTIVSGGTQNHLFLVSLLDKNISGKEAEAALGRANITVNKNTVPGETRSPFVTSGLRIGTPAITTRGFKEKEASQLAHW 384
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA_COXBN (Serine hydroxymethyltransferase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=glyA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.126e-24 Identity = 55/117 (47.01%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 351 I AVA K+A PE+K Y +Q+L N A+ + E GY +VSGGT+NHL LV+L +K I G E L +I NKNTVPG+ S V G+R+GTPA+T+RGF E++ +++A++ Sbjct: 268 IAAKAVAFKEAMQPEFKTYAQQILKNAKAMAEVMKERGYTIVSGGTQNHLFLVSLLDKNISGKEAEAALGRANITVNKNTVPGETRSPFVTSGLRIGTPAITTRGFKEKEASQLAHW 384
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA_COXB1 (Serine hydroxymethyltransferase OS=Coxiella burnetii (strain CbuK_Q154) GN=glyA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.126e-24 Identity = 55/117 (47.01%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 351 I AVA K+A PE+K Y +Q+L N A+ + E GY +VSGGT+NHL LV+L +K I G E L +I NKNTVPG+ S V G+R+GTPA+T+RGF E++ +++A++ Sbjct: 268 IAAKAVAFKEAMQPEFKTYAQQILKNAKAMAEVMKERGYTIVSGGTQNHLFLVSLLDKNISGKEAEAALGRANITVNKNTVPGETRSPFVTSGLRIGTPAITTRGFKEKEASQLAHW 384 The following BLAST results are available for this feature:
BLAST of CX295847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295847 ID=CX295847; Name=CX295847; organism=Citrus clementina; type=EST; length=738bpback to top |