CX295847
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA_XYLF2 (Serine hydroxymethyltransferase OS=Xylella fastidiosa (strain M23) GN=glyA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.297e-24 Identity = 62/144 (43.06%), Postives = 84/144 (58.33%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF--------DAAVKLAVKIKSETQGTK 408 I AVA K+A P +K YQ+QV+ N A TL+ GY++VSGGTENHL+LV++ + + G E L VHI NKN VP D S V G+R+GTPA+T+RG+ E+D +A++ D V AV+ K Q K Sbjct: 269 IAAKAVAFKEALEPAFKVYQQQVVKNAKAMAGTLMLRGYKIVSGGTENHLMLVDMIGRDVSGKDAEGALGQVHITVNKNAVPDDPRSPFVTSGLRLGTPAVTTRGYQEQDCVDLAHWIADVLDAPADVTVIAAVREKVAAQCKK 412
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA_SHEAM (Serine hydroxymethyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=glyA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.297e-24 Identity = 62/171 (36.26%), Postives = 92/171 (53.80%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIG 513 I G AVA K+A PE+K YQ+QV++N + LE GY++VSGGT+NHL+LV+L + + G + L A +I NKN+VP D S + GIR+GTPA+T RGF E + ++ ++ +A +S IA+++ V E +FP G Sbjct: 269 IAGKAVAFKEALEPEFKVYQQQVVTNAKAMVEVFLERGYKIVSGGTDNHLMLVDLIGRDLTGKEADAALGAANITVNKNSVPNDPRSPFITSGIRIGTPAITRRGFKEAEARELTHW----------------------ICDVLDNAKDESVIARVKGQVLELCARFPVYG 417
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA_ORITI (Serine hydroxymethyltransferase OS=Orientia tsutsugamushi (strain Ikeda) GN=glyA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.297e-24 Identity = 65/169 (38.46%), Postives = 91/169 (53.85%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA-YFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFP 504 I A+A +A P+YK Y QV+ N A+ L + GY +++GGT+NH++LV+L+ K I G E +L+A I NK +P D S + GIR+GTPA T+RGF E DF V Y D +A+ IKS K +D T + S I + V+E FP Sbjct: 258 IAAKAIAFSEALMPQYKEYINQVMLNAKVLAKLLQDRGYNILTGGTDNHMLLVDLRGKNITGQEAEYLLDAAGITCNKQVMPFDTTSPTITSGIRLGTPACTTRGFKENDFITVGKYIADILDNIAI-IKS---AKKNEDITITEIENSLDSVITHTKQHVQELCNSFP 422
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA_ACIRA (Serine hydroxymethyltransferase OS=Acinetobacter radioresistens GN=glyA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.297e-24 Identity = 62/139 (44.60%), Postives = 83/139 (59.71%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF--------DAAVKLAVKIKSE 393 + A+ K+A PEYKAYQ+QV+ N A+ L+E GY++VSGGT+NHL L++L + I G + L A HI NKN+VP D S V GIR+GTPA+T+RGF E + +A + D AV VK K E Sbjct: 268 VAAKAICFKEAMAPEYKAYQQQVVKNAQAMAEVLIERGYDVVSGGTKNHLFLLSLIKQDITGKDADAWLGAAHITVNKNSVPNDPRSPFVTSGIRIGTPAVTTRGFGEAEVRDLASWIADILDSKGDEAVINTVKAKVE 406
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA2_BURS3 (Serine hydroxymethyltransferase 2 OS=Burkholderia sp. (strain 383) GN=glyA2 PE=3 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 7.297e-24 Identity = 65/171 (38.01%), Postives = 95/171 (55.56%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIG 513 I G AVA K+A +PE+KAYQE+V+ N A+TL++ G +VSG TE+H++LV+L+ K I G E L A HI NKN +P D V G+R+G+PA+T+RGF VK ++E G + D + + A + + ++R V E K+FP G Sbjct: 267 IAGKAVAFKEALSPEFKAYQEKVVENARVLAETLVKRGLRIVSGRTESHVMLVDLRAKNITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGVRLGSPAMTTRGF--------------GVK-----EAEIVGNLIADVLEAPEDA---ATLERVRGQVAELTKRFPVYG 415
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA_SHISS (Serine hydroxymethyltransferase OS=Shigella sonnei (strain Ss046) GN=glyA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.530e-24 Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 345 I G AVALK+A PE+K YQ+QV N + LE GY++VSGGT+NHL LV+L +K + G + L +I NKN+VP D S V GIR+GTPA+T RGF E + ++A Sbjct: 269 IAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELA 383
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA_SHIFL (Serine hydroxymethyltransferase OS=Shigella flexneri GN=glyA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.530e-24 Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 345 I G AVALK+A PE+K YQ+QV N + LE GY++VSGGT+NHL LV+L +K + G + L +I NKN+VP D S V GIR+GTPA+T RGF E + ++A Sbjct: 269 IAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELA 383
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA_SHIF8 (Serine hydroxymethyltransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=glyA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.530e-24 Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 345 I G AVALK+A PE+K YQ+QV N + LE GY++VSGGT+NHL LV+L +K + G + L +I NKN+VP D S V GIR+GTPA+T RGF E + ++A Sbjct: 269 IAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELA 383
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA_SHIDS (Serine hydroxymethyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=glyA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.530e-24 Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 345 I G AVALK+A PE+K YQ+QV N + LE GY++VSGGT+NHL LV+L +K + G + L +I NKN+VP D S V GIR+GTPA+T RGF E + ++A Sbjct: 269 IAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELA 383
BLAST of CX295847 vs. ExPASy Swiss-Prot
Match: GLYA_SHIBS (Serine hydroxymethyltransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=glyA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.530e-24 Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = 1 Query: 4 ITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 345 I G AVALK+A PE+K YQ+QV N + LE GY++VSGGT+NHL LV+L +K + G + L +I NKN+VP D S V GIR+GTPA+T RGF E + ++A Sbjct: 269 IAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELA 383 The following BLAST results are available for this feature:
BLAST of CX295847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295847 ID=CX295847; Name=CX295847; organism=Citrus clementina; type=EST; length=738bpback to top |