CX295852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_PLAFA (Superoxide dismutase [Fe] OS=Plasmodium falciparum GN=SODB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.326e-18 Identity = 50/123 (40.65%), Postives = 59/123 (47.97%), Query Frame = 1 Query: 292 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWL 660 Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S FNNAAQ WNH F+W I+ DFGS FGSGW WL Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----AIFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWL 126
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_PLAF7 (Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate 3D7) GN=SODB PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.326e-18 Identity = 50/123 (40.65%), Postives = 59/123 (47.97%), Query Frame = 1 Query: 292 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWL 660 Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S FNNAAQ WNH F+W I+ DFGS FGSGW WL Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----AIFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWL 126
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_RICTY (Superoxide dismutase [Mn/Fe] OS=Rickettsia typhi GN=sodB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.955e-18 Identity = 48/140 (34.29%), Postives = 65/140 (46.43%), Query Frame = 1 Query: 244 KTGGRISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 + + S F L PY + +PH + +T ++H GKHH +YV NLN + E K LE ++ S +K + FNNA+Q WNH FFW I +DFGS QFGSGW W+V Sbjct: 5 RKANQTSYPFILPDLPYAKESFKPHFTCETFDYHHGKHHNSYVQNLNNLLKDREELQKKDLEGIIKWS-SKNSEVTVFNNASQIWNHTFFWYSIKPHGGGKPSGKVFEQISQDFGSFEQFCEQFKQEALGQFGSGWVWVV 143
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_RICPR (Superoxide dismutase [Mn/Fe] OS=Rickettsia prowazekii GN=sodB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.955e-18 Identity = 47/134 (35.07%), Postives = 63/134 (47.01%), Query Frame = 1 Query: 262 SAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 S F L PY + +PH +++T ++H GKHH +YV NLN I E K LE+++ S + + NNA+Q WNH FFW I +DFGS QFGSGW W+V Sbjct: 11 SYPFILPDLPYDKESFKPHFTRETFDYHHGKHHNSYVQNLNNLIKDREELQKKDLEEIIEWSSQNAE-VAILNNASQIWNHTFFWYSIKPHGGGKPSGKVFEQISKDFGSFEQFCAQFKQEAVGQFGSGWTWVV 143
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_RHIME (Superoxide dismutase [Mn] OS=Rhizobium meliloti GN=sodB PE=1 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17 Identity = 56/134 (41.79%), Postives = 64/134 (47.76%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFW-XXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVSK 669 FEL PY +AL P+MS++TLE+H KHH AYV N NK L D SLED+V SY G P FNNA Q +NH FW I+ D G QFGSGWAWL K Sbjct: 3 FELPNLPYDYDALAPYMSRETLEYHHDKHHLAYVTNGNKLAEEAGLSD-LSLEDIVKKSY--GTNQPLFNNAGQHYNHVHFWKWMKKGGGGTSLPGKLDAAIKSDLGGYDKFRADFSAAGAGQFGSGWAWLSVK 133
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_PORGI (Superoxide dismutase [Mn/Fe] OS=Porphyromonas gingivalis GN=sodB PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.713e-16 Identity = 51/131 (38.93%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 274 ELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVS 666 EL PY ++AL P +SK+T+EFH GKH + YVDNLNK I+GTE + L +V S +G + FNNA Q NH+ ++ I++ FGS T FGSGW WL S Sbjct: 4 ELISLPYAVDALAPVISKETVEFHHGKHLKTYVDNLNKLIIGTEF-ENADLNTIVQKS--EGGI---FNNAGQTLNHNLYFTQFRPGKGGAPKGKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLAS 128
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM_ACIAD (Superoxide dismutase [Mn] OS=Acinetobacter sp. (strain ADP1) GN=sodA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15 Identity = 51/139 (36.69%), Postives = 65/139 (46.76%), Query Frame = 1 Query: 265 AKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDV--VIASYNKGDLLPAFNNAAQAWNHDFFW-XXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVSKP 672 A+F+ P PY NAL+P + + T+E H+GKHH+AYVDNLN QI D L + I+ YN NN +NH FFW I +DFGS +FGSGWAWL+ P Sbjct: 23 AEFKQAPLPYATNALQPAIDQQTMEIHYGKHHKAYVDNLNAQIKTYPELDKTDLIQLQKQISKYNTA----VRNNGGGHFNHTFFWESLAATNKTGQPSPALVKQITQDFGSLDAFKQKFNEAASGRFGSGWAWLIVTP 157
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM1_BACAN (Superoxide dismutase [Mn] 1 OS=Bacillus anthracis GN=sodA1 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15 Identity = 53/139 (38.13%), Postives = 64/139 (46.04%), Query Frame = 1 Query: 265 AKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVVIASYNKGDLLPAF-----NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 AK EL PY +ALEPH K+T+ H KHH Y+ NLN + G EL D KS+E++V N ++ A NN NH FFW IE FGS T+FGSGWAWLV Sbjct: 2 AKHELPNLPYAYDALEPHFDKETMNIHHTKHHNTYITNLNAALEGHAELAD-KSVEELVA---NLNEVPEAIRTAVRNNGGGHANHTFFWTILSPNGGGQPVGELATAIEAKFGSFDAFKEEFAKAGATRFGSGWAWLV 136
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_BACFR (Superoxide dismutase [Fe] OS=Bacteroides fragilis GN=sodB PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15 Identity = 50/131 (38.17%), Postives = 69/131 (52.67%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHD-FFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWL 660 +E+ PY NALEP +S+ T+++H+GKH + YV+NLN + GTE +GK++E ++AS G + FNNA Q NH +F I+RDFGS FGSGWAWL Sbjct: 3 YEMPKLPYANNALEPVISQQTIDYHYGKHLQTYVNNLNSLVPGTEY-EGKTVE-AIVASAPDGAI---FNNAGQVLNHTLYFLQFAPKPAKNEPAGKLGEAIKRDFGSFENFKKEFNAASVGLFGSGWAWL 128
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM_KLEPL (Superoxide dismutase [Fe] (Fragment) OS=Klebsiella planticola GN=sodA PE=1 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 49/137 (35.77%), Postives = 59/137 (43.07%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA------FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 +EL PY +ALEPH+ T E H KHH YV NLN + GTE D K + D++ D LPA NN NH FW I+ FGS T+FGSGWAWL+ Sbjct: 3 YELPQLPYAYDALEPHIDAKTXEIHHSKHHNTYVTNLNAAVEGTEFAD-KDINDLIAML----DALPADKQTAVRNNGGGHANHTLFWEVIAPGGSNTPVGEVAKAIDAKFGSFDAFKEEFAKAATTRFGSGWAWLI 134 The following BLAST results are available for this feature:
BLAST of CX295852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295852 ID=CX295852; Name=CX295852; organism=Citrus clementina; type=EST; length=692bpback to top |