CX295868
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: ARL8_DICDI (ADP-ribosylation factor-like protein 8 OS=Dictyostelium discoideum GN=arl8 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.883e-27 Identity = 62/166 (37.35%), Postives = 94/166 (56.63%), Query Frame = 2 Query: 71 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 565 F LF K+EM + +VGL +GKTT++ + G + TIPTIGFN++ V N++ +WD+GGQ + R +W Y + ++FVVDS DR++ +++ L ++N+ L LLV ANK DLPN+ E+ L L + R S A + + LDWL Sbjct: 11 FKSLFWKQEMELTLVGLQGSGKTTLVNVISNGGFIEDTIPTIGFNMKKVTKGNVTIKLWDIGGQPRFRSMWERYCRGVNAIVFVVDSADREKFEQSKQALQDLINKPPLAKIPLLVVANKNDLPNSAGVDEMIQNLDLRGIVGREVCCYSISAKNSVNIDITLDWL 176
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: ARL8B_BOVIN (ADP-ribosylation factor-like protein 8B OS=Bos taurus GN=ARL8B PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.883e-27 Identity = 55/166 (33.13%), Postives = 100/166 (60.24%), Query Frame = 2 Query: 71 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 565 F LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ V N++ +WD+GGQ + + +W Y + +++++D+ DR++I +R+ELH +L++ +L+ +LV NK+DLPNA++ ++ +K+ L +++ R S + + L WL Sbjct: 12 FRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFQSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: ARL8B_PONAB (ADP-ribosylation factor-like protein 8B OS=Pongo abelii GN=ARL8B PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.476e-26 Identity = 55/166 (33.13%), Postives = 99/166 (59.64%), Query Frame = 2 Query: 71 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 565 F LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++++D+ R++I +R+ELH +L++ +L+ +LV NK+DLPNA++ ++ +K+ L +++ R S + + L WL Sbjct: 12 FRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAAYREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: ARL8A_HUMAN (ADP-ribosylation factor-like protein 8A OS=Homo sapiens GN=ARL8A PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.927e-26 Identity = 57/173 (32.95%), Postives = 102/173 (58.96%), Query Frame = 2 Query: 59 FTKL---FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 565 F KL F LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ + N++ +WD+GGQ + R +W Y + ++++VD+ D+++I +++ELH +L++ +L+ +LV NK+DLP A++ E+ +K+ L +++ R S + + L WL Sbjct: 5 FNKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: ARL8A_CHICK (ADP-ribosylation factor-like protein 8A OS=Gallus gallus GN=ARL8A PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.517e-26 Identity = 57/173 (32.95%), Postives = 102/173 (58.96%), Query Frame = 2 Query: 59 FTKL---FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 565 F KL F LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ + N++ +WD+GGQ + R +W Y + ++++VD+ D+++I +++ELH +L++ +L+ +LV NK+DLP A++ E+ +K+ L +++ R S + + L WL Sbjct: 5 FNKLLDWFRALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: ARL8A_XENTR (ADP-ribosylation factor-like protein 8A OS=Xenopus tropicalis GN=arl8a PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.287e-26 Identity = 56/173 (32.37%), Postives = 102/173 (58.96%), Query Frame = 2 Query: 59 FTKL---FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 565 F KL F LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ + N++ +WD+GGQ + R +W Y + ++++VD+ D+D+I +++ELH +L++ +L+ +LV NK+D+P A++ E+ +++ L +++ R S + + L WL Sbjct: 5 FNKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQDKIEASKNELHNLLDKAQLQGIPVLVLGNKRDIPGALDEKELIERMNLSAIQDREICCYSISCKEKDNIDITLQWL 177
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: ARL8_DROME (ADP-ribosylation factor-like protein 8 OS=Drosophila melanogaster GN=Gie PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.324e-26 Identity = 54/166 (32.53%), Postives = 96/166 (57.83%), Query Frame = 2 Query: 71 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 565 F +F K+EM + +VGL +GKTT + + G+ IPT+GFN+ + N++ VWD+GGQ + R +W Y + ++++VD+ D D++ +R+ELH +L++ +L +LV NK+DLP A++ + +++ L S++ R S + + L WL Sbjct: 12 FKSIFWKEEMELTLVGLQFSGKTTFVNVIASGQFAEDMIPTVGFNMRKITRGNVTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVLGNKRDLPGALDETGLIERMNLSSIQDREICCYSISCKEKDNIDITLQWL 177
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: ARL8A_MOUSE (ADP-ribosylation factor-like protein 8A OS=Mus musculus GN=Arl8a PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.632e-25 Identity = 56/173 (32.37%), Postives = 101/173 (58.38%), Query Frame = 2 Query: 59 FTKL---FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 565 F KL F LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ + N++ +WD+GGQ + R +W Y + ++++VD+ D+++I +++ELH +L++ +L+ +LV NK+DL A++ E+ +K+ L +++ R S + + L WL Sbjct: 5 FNKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLAGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: SAR1_USTMA (Small COPII coat GTPase SAR1 OS=Ustilago maydis GN=SAR1 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.527e-23 Identity = 61/175 (34.86%), Postives = 91/175 (52.00%), Query Frame = 2 Query: 86 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH-----------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 577 A K +IL +GLD AGKTT+L+ LK + T PT+ E + + FT +D+GG + R LW+ YF G++F+VD+ D +R EAR EL +L+ +EL L+ NK D P A++ E+ +GL+ +R ++ S G G EG W+S I Sbjct: 17 AHKNAKILFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGQVKFTTYDLGGHQQARRLWKDYFPEVDGIVFLVDTQDHERFAEARAELDALLSIEELSSVPFLILGNKIDAPGAVSEEELRQAIGLYQTTGKGKVPLKDIRPIEIFMCSVVMRQGYG--EGFRWISQYI 189
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: SAR1_YEAST (Small COPII coat GTPase SAR1 OS=Saccharomyces cerevisiae GN=SAR1 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.402e-23 Identity = 63/169 (37.28%), Postives = 88/169 (52.07%), Query Frame = 2 Query: 92 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR-------QRHWYIQSTCATSGEGLYEGLDWLSNNI 577 K ++L +GLD AGKTT+L+ LK + T PT E + NI FT +D+GG + R LW+ YF G++F+VD+ D +R EAR EL + N EL+D ++ NK D PNA++ AE+ LGL + QR + G E WLS I Sbjct: 22 KHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWLSQYI 190 The following BLAST results are available for this feature:
BLAST of CX295868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 217
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295868 ID=CX295868; Name=CX295868; organism=Citrus clementina; type=EST; length=717bpback to top |