CX295882

Overview
NameCX295882
Unique NameCX295882
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3)

HSP 1 Score: 194.512 bits (493), Expect = 4.942e-49
Identity = 101/228 (44.30%), Postives = 128/228 (56.14%), Query Frame = 2
Query:   11 GGAVCPGGLCCSKFGFCGNTPAYCTNG-CQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYC-FKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVI 688
            G   C    CCS  G+CG    YC+   CQ +CS                              LF+Q+  HR D  C  +GFY+Y +F+ AA SF AFGT G+  TRKRE+AAFLA  S + T G  +  + P+AWG C          D+C  S  WPCA GKKY  RGPIQ+++N+NYG AG+AI  DL++NPD V  DP ISFKTA WFWM++   KPSCHD++
Sbjct:   77 GNPPCGQDRCCSVHGWCGGGNDYCSGSKCQYRCSS---SVRGPRVALSGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHIS-QATSGERSDVENPHAWGLCHINTTTVTENDFC-TSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIV 297          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.137e-48
Identity = 98/178 (55.06%), Postives = 115/178 (64.61%), Query Frame = 2
Query:  194 RDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINV--DLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAADT 721
            R+LFEQ+L  RN+ AC  KGFYTYDAFIAAANSF  FGTTG+   RK+EIAAF  QTSHET GG      G +  GYCF ++                    +Y+GRGPIQ+++  NY  AG+ I V  DL+ NPD VA DP ISF+TA WFWMT Q  KPSCH+VI GQW  S ADT
Sbjct:   33 RELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQ---------------IDQSDRYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADT 191          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.321e-48
Identity = 96/174 (55.17%), Postives = 113/174 (64.94%), Query Frame = 2
Query:  197 DLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718
            DLF ++LK+RND  C   GFYTYDAFIAAANSF  FGTTG+   R++EIAAF  QTSHETTGG  +A   P+  GYCF ++                    +Y+GRGPIQ++   NY  AG AI  +L+ NPD VA D TISFKTA WFWMT Q  KPS HDVI G+W  SAAD
Sbjct:   34 DLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQ---------------SDRYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAAD 190          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.321e-48
Identity = 96/174 (55.17%), Postives = 112/174 (64.37%), Query Frame = 2
Query:  197 DLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718
            DLF ++LK+RND  C   GFYTYDAFIAAANSF  FGT+G+   R++EIAAF  QTSHETTGG  +A   P+  GYCF ++                    +Y+GRGPIQ++   NY  AG AI  DL+ NPD VA D TISFKTA WFWMT Q  KPS HDVI G W  SAAD
Sbjct:   34 DLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQ---------------SDRYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAAD 190          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.041e-47
Identity = 96/178 (53.93%), Postives = 113/178 (63.48%), Query Frame = 2
Query:  194 RDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINV--DLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAADT 721
            R+LFEQ+L  RN+ AC  KGFYTYDAFIAAANSF  FGT G+   RK+EIAAF  QTSHET GG      G +  GYCF ++                    +Y+GRGPIQ+++  NY  AG+ I V  +L+ NPD VA DP ISFKTA WFWMT Q  KPSCH+VI GQW  S  DT
Sbjct:   33 RELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQ---------------IEQSDRYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDT 191          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.296e-46
Identity = 92/175 (52.57%), Postives = 116/175 (66.29%), Query Frame = 2
Query:  200 LFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNT-DTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAADT 721
            +F  +L +R+++ C  +GFYTYDAFIAAANSF AFGT+G + +  +RE+AAF  QTSHETTGG   + D  + WGYCFK+E                A    Y+GRGPIQ++   NY  AG A+ +DL+ NPD V+ D  +SFKTA WFWMT Q  KPSCHDVI G+W  SAADT
Sbjct:   40 VFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGSSD-QFQWGYCFKEEINK-------------ATSPPYYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADT 200          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 1.066e-43
Identity = 93/211 (44.08%), Postives = 111/211 (52.61%), Query Frame = 2
Query:   23 CPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQE-QGNPGDYCQPS-QQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWM 649
            C  G CCS++G+CG T AYC  GCQS                                + F   +K++    C GK FYT  +F+ AA S+  F      D  KREIAAF A  +HET                C+  E  G   DYC  S +QWPC PGKKY+GRGP+QIS+N+NYGPAGK I  D LR+PD VA DPTISFKTA WFWM
Sbjct:   32 CQDGYCCSQWGYCGTTEAYCGQGCQSGPCWGSGGEAAAGMAGRKAGAGAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM 229          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 9.028e-43
Identity = 91/212 (42.92%), Postives = 113/212 (53.30%), Query Frame = 2
Query:   23 CPGGLCCSKFGFCGNTPAYCTNGCQS-QCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQE-QGNPGDYCQPS-QQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWM 649
            C   +CCSK+G+CG    YC +GC+S  C G                            + F   +K++    C GK FYT  +F+ AA+S+  F      D  KREIAAF A  +HET                C+  E  G   DYC  + +QWPC PGKKY+GRGP+QIS+NYNYGPAG+ I  D LR+PD VA DPTISFKTA WFWM
Sbjct:   34 CQSNMCCSKWGYCGTGKDYCGDGCRSGPCYGGGGGGGGGGGGGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM 232          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.459e-40
Identity = 86/210 (40.95%), Postives = 110/210 (52.38%), Query Frame = 2
Query:   23 CPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPS-QQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWM 649
            C    CCSKFG+CG T AYC +GCQS                                D F   +K++  + C+GK FYT  AF++A N++  F   G     KREIAAF A  +HET               +C+  E      YC  S +QWPCA G+KY+GRGP+QIS+NYNYGPAG+ I  + L +P+ VA D  I+FKTA WFWM
Sbjct:   30 CQPNFCCSKFGYCGTTDAYCGDGCQS--GPCRSGGGGGGGGGGGGGGSGGANVANVVTDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHETGH-------------FCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 224          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.718e-39
Identity = 85/210 (40.48%), Postives = 111/210 (52.86%), Query Frame = 2
Query:   23 CPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPG-DYC-QPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFW 646
            C    CCSK+GFCG    YC  GCQ+                                + F  L+   +D  C  KGFYT DAF+ AA  + +FG TG+ D  KREIAAF A  +HET               +C+ +E   P  +YC + S QWPC  GK Y+GRGP+QIS+N+NYGPAG++I  D L +PDAVA  P ++F+TA W+W
Sbjct:   30 CASDQCCSKWGFCGTGSDYCGTGCQA-------------GPCDVPATNDVSVASIVTPEFFAALVAQADDG-CAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIK-------------FCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYW 212          
The following BLAST results are available for this feature:
BLAST of CX295882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
AGI_URTDI4.942e-4944.30Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE... [more]
CHIA_SOLCI7.137e-4855.06Acidic endochitinase pcht28 OS=Solanum chilense PE... [more]
CHIQ_TOBAC9.321e-4855.17Acidic endochitinase Q OS=Nicotiana tabacum PE=1 S... [more]
CHIP_TOBAC9.321e-4855.17Acidic endochitinase P OS=Nicotiana tabacum PE=1 S... [more]
CHIA_SOLLC6.041e-4753.93Acidic 26 kDa endochitinase OS=Solanum lycopersicu... [more]
CHI8_ORYSJ2.296e-4652.57Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI4_ORYSJ1.066e-4344.08Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI5_ORYSJ9.028e-4342.92Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIA_MAIZE2.459e-4040.95Endochitinase A OS=Zea mays PE=1 SV=1[more]
CHI6_ORYSJ2.718e-3940.48Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht... [more]

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Properties
Property NameValue
Genbank descriptionC05076H06SK DroRLeaf1 Citrus clementina cDNA clone C05076H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295882 ID=CX295882; Name=CX295882; organism=Citrus clementina; type=EST; length=735bp
GAGGCAGGCTGGAGGAGCTGTATGTCCAGGAGGACTGTGTTGCAGCAAAT
TTGGCTTCTGCGGCAACACTCCTGCTTATTGCACCAATGGCTGCCAAAGC
CAGTGCAGTGGGTCACCCTCACCCACGCCGACTAATCCGACTCCCGTACC
TGCTCCAAGCGGCGGCGGGAACAATATCGGTTCACTAATTAGCAGGGACC
TATTTGAACAGCTGTTGAAGCATCGTAATGATGCTGCTTGCCAAGGAAAA
GGTTTTTACACTTACGACGCTTTCATCGCTGCCGCCAATTCCTTTGGTGC
CTTCGGAACAACCGGTAACACCGATACTCGCAAAAGAGAAATCGCGGCCT
TTTTGGCTCAAACTTCACATGAAACTACAGGTGGCTGGCCTACTGCGCCC
GATGGTCCATATGCATGGGGATATTGCTTCAAGCAGGAGCAAGGAAACCC
TGGAGATTATTGTCAACCAAGTCAACAATGGCCATGTGCACCTGGGAAAA
AGTATTTTGGCCGAGGTCCCATCCAGATTTCATACAACTACAACTACGGT
CCAGCAGGAAAAGCCATAAACGTTGACTTGCTTCGCAACCCAGATGCTGT
GGCAAATGATCCTACTATTTCGTTCAAGACTGCTTTCTGGTTCTGGATGA
CCCGACAGTCACCAAAACCTTCATGCCACGATGTTATCACAGGCCAATGG
AAAGCATCAGCCGCCGATACTCAGCTGGTCGCCTT
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