CX296262

Overview
NameCX296262
Unique NameCX296262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length520
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.391e-12
Identity = 47/133 (35.34%), Postives = 72/133 (54.14%), Query Frame = 3
Query:   15 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            K++DFG ++L       L+T V G    LGY+ PEY  T +   K DVYSFG VL+EL++G++     + PET K +LV +    +   +L + ID  ++ +    E+ +  +VA  C      +ERP M EV
Sbjct:  248 KVADFGASKLKPMDKEQLTTMVQGT---LGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKAL-CFERPETSK-HLVSYFVLATKENRLHEIIDDQVLNEENQREIHEAARVAVECT-RLKGEERPRMIEV 374          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 3.122e-12
Identity = 48/135 (35.56%), Postives = 75/135 (55.56%), Query Frame = 3
Query:   15 KISDFGLARLMNPID--THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            K++DFGL+R   PID   H+ST V G     GY+ PEY RT   + K DVYSFG VLLE+VT +   +  +     + ++ +W+  + + G ++  +D  L+     N  ++ +++A  CV P+    RPTM  V
Sbjct:  723 KLADFGLSRSF-PIDGECHVSTVVAGT---PGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVIDKTRE----RPHINDWVGFMLTKGDIKSIVDPKLMGDYDTNGAWKIVELALACVNPS-SNRRPTMAHV 848          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.122e-12
Identity = 48/138 (34.78%), Postives = 75/138 (54.35%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            P++ DFGLARL        +T V    G +GY+APE AR   ++   DV++FG +LLE+V+G +PT+      TF   + +W+ +L ++G++  AID  L +   + E    L V   C     P+ RP M  V ++L
Sbjct:  505 PRLGDFGLARLYERGSQSCTTVV---VGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKPTDSG----TF--FIADWVMELQASGEILSAIDPRLGSGYDEGEARLALAVGLLCCHHK-PESRPLMRMVLRYL 632          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 3.122e-12
Identity = 52/143 (36.36%), Postives = 73/143 (51.05%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 440
            PKISDFG+AR  +  +T   T      G  GY+APEYA     + K DVYSFG ++LE++TG+R + +     T   +L  +  Q    G   + ID  L+      E  Q L++A +CV    P +RPTM  V   L +  E
Sbjct:  472 PKISDFGMARQFDFDNTQAVT--RRVVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEIITGKRNSGLGLGEGT---DLPTFAWQNWIEGTSMELIDPVLLQTHDKKESMQCLEIALSCVQEN-PTKRPTMDSVVSMLSSDSE 608          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.078e-12
Identity = 50/134 (37.31%), Postives = 68/134 (50.75%), Query Frame = 3
Query:   15 KISDFGLARLMNPID-THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            K++DFGL++    ID TH+ST V G FG   Y+ PEY R    T K DVYSFG V+ E++      +     E    NL EW  +    GQL+  ID  L  K   + L +F +    C L     +RP+M +V
Sbjct:  621 KVADFGLSKTGPEIDQTHVSTAVKGSFG---YLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVIDPTLTREMV--NLAEWAMKWQKKGQLEHIIDPSLRGKIRPDSLRKFGETGEKC-LADYGVDRPSMGDV 748          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.078e-12
Identity = 50/139 (35.97%), Postives = 71/139 (51.08%), Query Frame = 3
Query:   15 KISDFGLARLMNPID-THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 428
            K+SDFGL++     D +H++T V G     GY+ PEY  TL  T K DVYSFG VLLEL+ G  P + + +P++F  NLV W       G   + +D  L        + +   +A  CV       RP++ EV   L+
Sbjct:  747 KVSDFGLSKQFTKADASHITTVVKGT---AGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSHSGSPDSF--NLVLWARPNLQAGAF-EIVDDILKETFDPASMKKAASIAIRCV-GRDASGRPSIAEVLTKLK 878          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 4.078e-12
Identity = 55/146 (37.67%), Postives = 80/146 (54.79%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSS--TGQLQDAIDKCLVAK---GVDN-ELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            FEPKI+DFGL +L+N   +  +  V+   G LGY+APE+  +L  T K DVYS+G VLLEL+TG R + +    +     L + +  LS+   G+ Q  ID  L +K    V+  +    +K+A +C L     +RPTM    Q L
Sbjct:  670 FEPKITDFGLVKLLNRGGSTQN--VSHVRGTLGYIAPEWVSSLPITAKVDVYSYGVVLLELLTGTRVSELVGGTDEVHSMLRKLVRMLSAKLEGEEQSWIDGYLDSKLNRPVNYVQARTLIKLAVSC-LEEDRSKRPTMEHAVQTL 812          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 4.078e-12
Identity = 46/141 (32.62%), Postives = 76/141 (53.90%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAK-GVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 431
            PKI+DFG+A+L +   T  + F +   G  GY+APEYA +   + K DV+SFG ++LE++ G++  N     E     L+ ++ +    G++ + +D  LV   GV +E+ + + +   CV     + RPTM  V   L A
Sbjct:  483 PKIADFGMAKLFDTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEIIKGKK--NNWSPEEDSSLFLLSYVWKSWREGEVLNIVDPSLVETIGVSDEIMKCIHIGLLCVQEN-AESRPTMASVVVMLNA 620          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 5.326e-12
Identity = 55/173 (31.79%), Postives = 86/173 (49.71%), Query Frame = 3
Query:    9 EPKISDFGLARLMNPID--THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL---------RAIGERYHFTTEDEIMLPSDSGD 494
            + K++DFGL+R   P+D  +H+ T V G     GY+ PEY RT   + K DVYSFG VLLE+VT +   N  +     + ++ EW+  + + G ++  +D  L      N +++ +++A  CV P+    RPTM  V   L         R  G +  +  E     PS + D
Sbjct:  707 QAKLADFGLSRSF-PVDGESHVMTVVAGT---PGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVMNKNRE----RPHINEWVMFMLTNGDIKSIVDPKLNEDYDTNGVWKVVELALACVNPS-SSRRPTMPHVVMELNECLALEIERKQGSQATYIKESVEFSPSSASD 870          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 5.326e-12
Identity = 51/140 (36.43%), Postives = 71/140 (50.71%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQL--SSTGQLQDAIDKCL--VAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            +E KISDFG A+L+ P  ++ S       G  GYVAPE A  +  T K DVYSFG + LE++ GE P           G+LV  ++     +T  L+   D  L      +  E+ + LKVA  C L + P+ RPTM  +
Sbjct:  917 YEAKISDFGTAKLLKPDSSNWSAVA----GTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKGEHP-----------GDLVSTLSSSPPDATLSLKSISDHRLPEPTPEIKEEVLEILKVALLC-LHSDPQARPTMLSI 1040          
The following BLAST results are available for this feature:
BLAST of CX296262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
WAKLS_ARATH2.391e-1235.34Putative wall-associated receptor kinase-like 16 O... [more]
Y1518_ARATH3.122e-1235.56Probable LRR receptor-like serine/threonine-protei... [more]
LRKA3_ARATH3.122e-1234.78Lectin-domain containing receptor kinase A4.3 OS=A... [more]
CRK27_ARATH3.122e-1236.36Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
Y5597_ARATH4.078e-1237.31Probable receptor-like protein kinase At5g59700 OS... [more]
Y5487_ARATH4.078e-1235.97Probable LRR receptor-like serine/threonine-protei... [more]
KPRO_MAIZE4.078e-1237.67Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
CRK41_ARATH4.078e-1232.62Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
Y5189_ARATH5.326e-1231.79Probable LRR receptor-like protein kinase At1g5189... [more]
Y4885_ARATH5.326e-1236.43Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC05138A08SK FerrChloL1 Citrus clementina cDNA clone C05138A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296262 ID=CX296262; Name=CX296262; organism=Citrus clementina; type=EST; length=520bp
GAGGTTTTGAGCCCAAAATATCTGATTTCGGCCTTGCTAGGCTCATGAAC
CCAATTGATACTCATTTAAGTACCTTCGTGAATGGAGAGTTTGGGGATTT
GGGTTATGTTGCTCCGGAGTACGCAAGAACTCTTGTTGCCACACCGAAGG
GAGATGTTTACAGCTTTGGAACTGTGCTTCTTGAGTTGGTAACTGGTGAG
AGACCTACCAATGTGGCTAAAGCTCCTGAAACCTTTAAGGGAAATCTCGT
TGAATGGATTGCACAGCTGTCAAGTACCGGTCAACTTCAAGATGCTATTG
ATAAATGCTTGGTTGCGAAGGGCGTTGACAATGAGCTTTTTCAGTTCCTT
AAAGTTGCATGTAACTGTGTACTTCCAACCATCCCCAAGGAGAGGCCTAC
CATGTTTGAAGTATACCAGTTTCTAAGAGCTATTGGGGAGCGTTACCATT
TTACCACTGAAGACGAGATTATGCTGCCCTCAGACAGCGGTGATGCCGAT
ATTCTTGAAGAACTTATTGT
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