CX296262

Overview
NameCX296262
Unique NameCX296262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length520
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.326e-12
Identity = 51/133 (38.35%), Postives = 67/133 (50.38%), Query Frame = 3
Query:   15 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            K++DFGL++ +     H+ST V G FG   Y+ PEY R    T K DVYSFG VLLE +   RP    + P   + NL EW  Q    G L+  ID  L        + +F + A  C L     +RPTM +V
Sbjct:  665 KVADFGLSKDVAFGQNHVSTAVKGSFG---YLDPEYFRRQQLTDKSDVYSFGVVLLEALCA-RPAINPQLPRE-QVNLAEWAMQWKRKGLLEKIIDPHLAGTINPESMKKFAEAAEKC-LEDYGVDRPTMGDV 791          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 5.326e-12
Identity = 45/143 (31.47%), Postives = 71/143 (49.65%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            +  K++DFG +R +    TH +T ++G    +GYV PEY R+   T K DVYSFG +L EL+TG++P  + +  +     L E         +L D +D  +       ++     +A  C L +  + RP M EV+  L  I
Sbjct:  582 YRAKVADFGTSRSVTIDQTHWTTVISGT---VGYVDPEYYRSSQYTEKSDVYSFGVILAELITGDKPVIMVQNTQEIIA-LAEHFRVAMKERRLSDIMDARIRDDSKPEQVMAVANLAMKC-LSSRGRNRPNMREVFTELERI 719          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.326e-12
Identity = 47/138 (34.06%), Postives = 73/138 (52.90%), Query Frame = 3
Query:    6 FEPKISDFGLARL--MNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            F+ KI+DFGL+R   +    + +ST V G    LGY+ PEY  T   + K DVYSFG +LLE++T +R  +  +       N+ EW+  +   G     +D  L      + +++ L+VA +C  P+  K RP M +V
Sbjct:  703 FKAKIADFGLSRSFQVGGDQSQVSTVVAGT---LGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVIDQTRE----NPNIAEWVTFVIKKGDTSQIVDPKLHGNYDTHSVWRALEVAMSCANPSSVK-RPNMSQV 832          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.326e-12
Identity = 50/140 (35.71%), Postives = 76/140 (54.29%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCL--VAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            P++ DFGLARL        +T V    G +GY+APE AR   ++   DV++FG +LLE+V+G RPT+      TF   L +W+ +L + G++  A+D  L     GV+  L   + + C    PT    RP+M  V ++L
Sbjct:  504 PRLGDFGLARLYERGSQSNTTVV---VGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTDSG----TF--FLADWVMELHARGEILHAVDPRLGFGYDGVEARLALVVGLLCCHQRPT---SRPSMRTVLRYL 631          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 5.326e-12
Identity = 43/138 (31.16%), Postives = 73/138 (52.90%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            PKI+DFG+AR      T  +T      G  GY+ PEY      + K DVYSFG ++LE++ G++ ++  +   +  GNLV ++ +L +     + +D  +      +E+ + + ++  CV    P +RPTM  V+Q L
Sbjct:  474 PKIADFGVARNFRVDQTEATT--GRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEIIVGKKSSSFHEIDGSV-GNLVTYVWRLWNNESFLELVDPAMGESYDKDEVIRCIHISLLCVQEN-PADRPTMSTVFQML 607          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.956e-12
Identity = 50/142 (35.21%), Postives = 80/142 (56.34%), Query Frame = 3
Query:   15 KISDFGLARLM-NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQ-FLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            K++DFGL++L+ +P   H++T V G    +GY+ PEY  T   T K DVY FG V+LEL+TG+ P  + +     K  + + + +  +   LQ+ +D  ++    + + F+ ++ VA  CV P     RPTM EV Q L +I
Sbjct:  773 KVADFGLSKLVGDPEKAHVTTQVKGT---MGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSP--IDRGSYVVK-EVKKKMDKSRNLYDLQELLDTTIIQNSGNLKGFEKYVDVALQCVEPE-GVNRPTMSEVVQELESI 907          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.956e-12
Identity = 47/163 (28.83%), Postives = 81/163 (49.69%), Query Frame = 3
Query:   18 ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID-KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG-ERYHFTTEDEIMLPSDSGDAD 500
            +SD GL  +M+P+   +S          GY APE   T  ++   DVYSFG VLLEL+TG+ P +     E    +LV W+  +       +  D + L    ++ E+ + L++A +CV+     +RP M ++ + +  +G  R     E E+   S++G ++
Sbjct:  479 VSDLGLTAVMSPLAPPISR-------QAGYRAPEVTDTRKSSQLSDVYSFGVVLLELLTGKSPIHTTAGDEII--HLVRWVHSVVREEWTAEVFDIELLRYTNIEEEMVEMLQIAMSCVVKA-ADQRPKMSDLVRLIENVGNRRTSIEPEPELKPKSENGASE 631          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.956e-12
Identity = 49/140 (35.00%), Postives = 73/140 (52.14%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDN----ELFQFLKVACNCVLPTIPKERPTMFEV 413
            FE  ISDFGL RL     +  +   N   G LGYV+PE   +   T + D+YSFG VLLE++TG+RP        T   ++V+W+ +    GQ+ + ++  L+    ++    E    +KV   C   T P +RPTM +V
Sbjct:  978 FEAHISDFGLDRLTIRSPSRSAVTAN-TIGTLGYVSPEATLSGEITRESDIYSFGIVLLEILTGKRPVMF-----TQDEDIVKWVKKQLQRGQVTELLEPGLLELDPESSEWEEFLLGIKVGLLCT-ATDPLDRPTMSDV 1110          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.956e-12
Identity = 51/133 (38.35%), Postives = 67/133 (50.38%), Query Frame = 3
Query:   15 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            K++DFGL++ +     H+ST V G FG   Y+ PEY R    T K DVYSFG VLLE +   RP    + P   + NL EW       G L+  ID  LV       + +F + A  C L     +RPTM +V
Sbjct:  664 KVADFGLSKDVAFGQNHVSTAVKGSFG---YLDPEYFRRQQLTDKSDVYSFGVVLLEALCA-RPAINPQLPRE-QVNLAEWAMLWKQKGLLEKIIDPHLVGAVNPESMKKFAEAAEKC-LADYGVDRPTMGDV 790          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 6.956e-12
Identity = 56/138 (40.58%), Postives = 73/138 (52.90%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            P+ISDFGLA+L +   TH+ST V G    +GY+APEYA     T K DVY+FG V LELV+G RP N  +  E  K  L+EW   L    +  + ID  L    ++ E  + + +A  C   T    RP M  V   L
Sbjct:  832 PQISDFGLAKLYDDKKTHISTRVAGT---IGYLAPEYAMRGHLTEKTDVYAFGVVALELVSG-RP-NSDENLEEEKKYLLEWAWNLHEKSRDIELIDDKLTDFNME-EAKRMIGIALLCT-QTSHALRPPMSRVVAML 962          
The following BLAST results are available for this feature:
BLAST of CX296262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
Y4391_ARATH5.326e-1238.35Probable receptor-like protein kinase At4g39110 OS... [more]
WAKLM_ARATH5.326e-1231.47Wall-associated receptor kinase-like 17 OS=Arabido... [more]
MEE39_ARATH5.326e-1234.06Probable LRR receptor-like serine/threonine-protei... [more]
LRKA2_ARATH5.326e-1235.71Lectin-domain containing receptor kinase A4.2 OS=A... [more]
CRK16_ARATH5.326e-1231.16Putative cysteine-rich receptor-like protein kinas... [more]
Y5977_ARATH6.956e-1235.21Probable leucine-rich repeat receptor-like protein... [more]
Y4374_ARATH6.956e-1228.83Probable inactive receptor kinase At4g23740 OS=Ara... [more]
Y4361_ARATH6.956e-1235.00Probable LRR receptor-like serine/threonine-protei... [more]
Y2214_ARATH6.956e-1238.35Probable receptor-like protein kinase At2g21480 OS... [more]
Y1561_ARATH6.956e-1240.58Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC05138A08SK FerrChloL1 Citrus clementina cDNA clone C05138A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296262 ID=CX296262; Name=CX296262; organism=Citrus clementina; type=EST; length=520bp
GAGGTTTTGAGCCCAAAATATCTGATTTCGGCCTTGCTAGGCTCATGAAC
CCAATTGATACTCATTTAAGTACCTTCGTGAATGGAGAGTTTGGGGATTT
GGGTTATGTTGCTCCGGAGTACGCAAGAACTCTTGTTGCCACACCGAAGG
GAGATGTTTACAGCTTTGGAACTGTGCTTCTTGAGTTGGTAACTGGTGAG
AGACCTACCAATGTGGCTAAAGCTCCTGAAACCTTTAAGGGAAATCTCGT
TGAATGGATTGCACAGCTGTCAAGTACCGGTCAACTTCAAGATGCTATTG
ATAAATGCTTGGTTGCGAAGGGCGTTGACAATGAGCTTTTTCAGTTCCTT
AAAGTTGCATGTAACTGTGTACTTCCAACCATCCCCAAGGAGAGGCCTAC
CATGTTTGAAGTATACCAGTTTCTAAGAGCTATTGGGGAGCGTTACCATT
TTACCACTGAAGACGAGATTATGCTGCCCTCAGACAGCGGTGATGCCGAT
ATTCTTGAAGAACTTATTGT
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