CX296262

Overview
NameCX296262
Unique NameCX296262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length520
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.186e-11
Identity = 51/136 (37.50%), Postives = 74/136 (54.41%), Query Frame = 3
Query:    9 EPKISDFGLARLMNPIDTHLSTFVNGEFG-DLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI-AQLSSTGQLQD-AIDKCL--VAKGVDNELFQFLKVACNCVLPTIPKERPT 401
            E  + DFGLA+++   +   +T  N  F    GY+APEYA +L AT K DVYS G VL+E+VTG+ PT+     E    ++V W+   L   G  +D  ID  L  +    ++   Q L++A  C   T P+ERP+
Sbjct: 1097 EAHLGDFGLAKVLTE-NCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTDSVFGAEM---DMVRWVETHLEVAGSARDKLIDPKLKPLLPFEEDAACQVLEIALQCT-KTSPQERPS 1227          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.186e-11
Identity = 48/143 (33.57%), Postives = 75/143 (52.45%), Query Frame = 3
Query:    9 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAK----GVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            E +++DFG+A+ +    +H ST+V    G +GY+ PEYART   T K DVYS+G VLLEL+T  +  +        + NL   I   +   ++ +  D  + +     GV  ++FQ L + C       P +RPTM +V + L
Sbjct:  786 EARLTDFGIAKSLCVSKSHTSTYV---MGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTRRKAVD-------DESNLHHLIMSKTGNNEVMEMADPDITSTCKDLGVVKKVFQ-LALLCT---KRQPNDRPTMHQVTRVL 914          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.186e-11
Identity = 45/138 (32.61%), Postives = 73/138 (52.90%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            PKI+DFG+AR      T  +T      G  GY+ PEY      + K DVYSFG ++LE+V G++ ++  K  ++  GNLV  + +L +     D ID  +     ++++ + + +   CV  T P +RP M  ++Q L
Sbjct:  468 PKIADFGMARNFRVDQTEDNT--RRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFYKIDDS-GGNLVTHVWRLWNNDSPLDLIDPAIEESCDNDKVIRCIHIGLLCVQET-PVDRPEMSTIFQML 601          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.186e-11
Identity = 45/138 (32.61%), Postives = 72/138 (52.17%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            PKI+DFG+AR      T   T      G  GY+ PEY      + K DVYSFG ++LE+V G++ ++  +  ++  GNLV  + +L +     D ID  +     ++E+ + + +   CV  T P +RP M  ++Q L
Sbjct:  478 PKIADFGMARNFRVDQTEDQT--GRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFFQMDDS-GGNLVTHVWRLWNNDSPLDLIDPAIKESYDNDEVIRCIHIGILCVQET-PADRPEMSTIFQML 611          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.186e-11
Identity = 45/138 (32.61%), Postives = 73/138 (52.90%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            PK++DFG+AR+     T  +T      G  GY+APEYA     + K DVYSFG ++LE+V+G + +++ +   +   NLV +  +L S G   + +D         +E+ + + +A  CV      +RPTM  + Q L
Sbjct:  483 PKVADFGMARIFGMDQTEANT--RRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSGMKNSSLDQMDGSI-SNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQED-ANDRPTMSAIVQML 616          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.186e-11
Identity = 55/138 (39.86%), Postives = 70/138 (50.72%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPID-THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA-QLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            F  K+SDFGLA+     D TH+ST V G  G   Y APEY  T   T K DVYSFG VLLEL++G R   V K+    + +LV+W    L    +L   +D  L  +      +    +A  C+ P   K RP M EV
Sbjct:  228 FNSKLSDFGLAKAGPTGDKTHVSTQVMGTHG---YAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRA--VDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPD-AKLRPKMSEV 359          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.550e-11
Identity = 46/137 (33.58%), Postives = 73/137 (53.28%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNE-LFQFLKVACNCVLPTIPKERPTMFEV 413
            +  KISDFG A+L+    ++ S       G  GYVAPE+A T+  T K DVYSFG ++LEL+ G+ P ++  +  +  G  +       S   + D  ++ L  +G + E L + +++A  C L   P+ RPTM  +
Sbjct:  993 YTAKISDFGTAKLLKTDSSNWSAVA----GTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHPGDLVSSLSSSPGEAL-------SLRSISD--ERVLEPRGQNREKLLKMVEMALLC-LQANPESRPTMLSI 1115          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.550e-11
Identity = 47/157 (29.94%), Postives = 77/157 (49.04%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDEIMLPS 482
            PKI+DFGL R M    T  +T   G  G LGY+APEY      T K DVY+FG +++E+VTG++     +   +   ++ E          L  +ID  L    V+ E  + L++   CV  ++ + RP+M E+   L+    ++ +  +   +  S
Sbjct:  457 PKIADFGLIRSMGTDKTQTNT---GIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTSSVLYSVWEHF----KANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSV-ELRPSMSEIVFMLQNKDSKFEYPKQPPFLSAS 605          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.024e-11
Identity = 50/133 (37.59%), Postives = 68/133 (51.13%), Query Frame = 3
Query:   15 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            K+SDFGL++     + H+ST V G FG   Y+ PEY R    T K DVYSFG VL E++   RP    + P   + NL E+   L   G L+  ID  +V       L +F++ A  C L     +RP M +V
Sbjct:  670 KVSDFGLSKDAPMDEGHVSTAVKGSFG---YLDPEYFRRQQLTDKSDVYSFGVVLFEVLCA-RPVINPQLPRE-QVNLAEYAMNLHRKGMLEKIIDPKIVGTISKGSLRKFVEAAEKC-LAEYGVDRPGMGDV 796          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.024e-11
Identity = 46/140 (32.86%), Postives = 76/140 (54.29%), Query Frame = 3
Query:   15 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            K++DFG ++L+      L+T V G    LGY+ PEY  T +   K DVYSFG VL+EL++G++     + P+  K +LV +    +   +L + ID  ++ +    E+ +  ++A  C    + +ERP M EV   L A+
Sbjct:  555 KVADFGASKLIPMDKEQLTTMVQGT---LGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQKAL-CFERPQASK-HLVSYFVSATEENRLHEIIDDQVLNEDNLKEIQEAARIAAECT-RLMGEERPRMKEVAAKLEAL 688          
The following BLAST results are available for this feature:
BLAST of CX296262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
GSO1_ARATH1.186e-1137.50LRR receptor-like serine/threonine-protein kinase ... [more]
ERECT_ARATH1.186e-1133.57LRR receptor-like serine/threonine-protein kinase ... [more]
CRK32_ARATH1.186e-1132.61Putative cysteine-rich receptor-like protein kinas... [more]
CRK31_ARATH1.186e-1132.61Putative cysteine-rich receptor-like protein kinas... [more]
CRK20_ARATH1.186e-1132.61Putative cysteine-rich receptor-like protein kinas... [more]
APK2B_ARATH1.186e-1139.86Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y1571_ARATH1.550e-1133.58Probable leucine-rich repeat receptor-like protein... [more]
CRK1_ARATH1.550e-1129.94Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
Y5613_ARATH2.024e-1137.59Probable receptor-like protein kinase At5g61350 OS... [more]
WAK3_ARATH2.024e-1132.86Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05138A08SK FerrChloL1 Citrus clementina cDNA clone C05138A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296262 ID=CX296262; Name=CX296262; organism=Citrus clementina; type=EST; length=520bp
GAGGTTTTGAGCCCAAAATATCTGATTTCGGCCTTGCTAGGCTCATGAAC
CCAATTGATACTCATTTAAGTACCTTCGTGAATGGAGAGTTTGGGGATTT
GGGTTATGTTGCTCCGGAGTACGCAAGAACTCTTGTTGCCACACCGAAGG
GAGATGTTTACAGCTTTGGAACTGTGCTTCTTGAGTTGGTAACTGGTGAG
AGACCTACCAATGTGGCTAAAGCTCCTGAAACCTTTAAGGGAAATCTCGT
TGAATGGATTGCACAGCTGTCAAGTACCGGTCAACTTCAAGATGCTATTG
ATAAATGCTTGGTTGCGAAGGGCGTTGACAATGAGCTTTTTCAGTTCCTT
AAAGTTGCATGTAACTGTGTACTTCCAACCATCCCCAAGGAGAGGCCTAC
CATGTTTGAAGTATACCAGTTTCTAAGAGCTATTGGGGAGCGTTACCATT
TTACCACTGAAGACGAGATTATGCTGCCCTCAGACAGCGGTGATGCCGAT
ATTCTTGAAGAACTTATTGT
back to top