CX296262

Overview
NameCX296262
Unique NameCX296262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length520
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.024e-11
Identity = 42/138 (30.43%), Postives = 72/138 (52.17%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            PKI+DFGLAR      T  +T      G  GY+ PEY      + K DVYSFG ++LE++ G++ ++  +   +   NLV  + +L + G L + +D  +      +E+ + + +   CV    P +RP+M  +++ L
Sbjct:  502 PKIADFGLARNFRVNQTEANT--GRVVGTFGYMPPEYVANGQFSTKSDVYSFGVLILEIIGGKKNSSFHQIDGSV-SNLVTHVWRLRNNGSLLELVDPAIGENYDKDEVIRCIHIGLLCVQEN-PDDRPSMSTIFRML 635          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.024e-11
Identity = 59/146 (40.41%), Postives = 75/146 (51.37%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPID--THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI-AQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            +  K+SDFGLA+   PI   +H+ST V G  G   Y APEY  T   T K DVYSFG VLLEL++G R   V K   + + NLVEW    L +  ++   ID  L  +    E  +   ++  C L T  K RP M EV   L  I
Sbjct:  215 YNAKLSDFGLAK-DGPIGDKSHVSTRVMGTHG---YAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRA--VDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRC-LTTEIKLRPNMSEVVSHLEHI 353          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 2.643e-11
Identity = 51/169 (30.18%), Postives = 82/169 (48.52%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDEIMLPSDSGDADILEE 512
            +  K+SDFG +R +    TH +T ++G    +GYV PEY  +   T K DVYSFG VL+EL+TGE+P       +  +G L +         +  + +D  +       ++     +A  C L +  K+RP M +V+  L    E+   + ED ++   +   AD  EE
Sbjct:  588 YRTKVSDFGTSRSVTIDHTHWTTVISGT---VGYVDPEYYGSSQYTDKSDVYSFGVVLVELITGEKPVITVSNSQEIRG-LADHFRVAMKENRFFEIMDARIRDGCKPEQVMAVANLARRC-LNSKGKKRPCMRKVFTDL----EKILASQEDSLVNIENDDGADDEEE 747          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.643e-11
Identity = 49/134 (36.57%), Postives = 67/134 (50.00%), Query Frame = 3
Query:   15 KISDFGLARLMNPID-THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            K++DFGL++    +D TH+ST V G FG   Y+ PEY R    T K DVYSFG VL+E++      N     E  + N+ EW       G L   +D  L  K     L +F + A  C L     +RP+M +V
Sbjct:  649 KVADFGLSKTGPSLDQTHVSTAVKGSFG---YLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPRE--QVNIAEWAMAWQKKGLLDQIMDSNLTGKVNPASLKKFGETAEKC-LAEYGVDRPSMGDV 776          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.643e-11
Identity = 51/145 (35.17%), Postives = 80/145 (55.17%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPID-THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI-AQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            +  K+SDFGLAR     D +++ST V G +G   Y APEY  +     + DVYSFG +LLE+++G+R  +  +  +  + NLV+W    L+S  ++   +D  L  + +  E  +   VA  C L   PK RPTM +V + L+ +
Sbjct:  214 YNAKLSDFGLARDGPMGDLSYVSTRVMGTYG---YAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAK--EENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQC-LSFEPKSRPTMDQVVRALQQL 352          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.452e-11
Identity = 44/129 (34.11%), Postives = 65/129 (50.39%), Query Frame = 3
Query:  102 GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVA-KGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDEIMLPSD 485
            GY APE   T   T K DVYSFG +LLEL+TG+ P   +   E    +L  W+  +       +  D  L+    ++ E+ Q L++A  CV  T+P +RP M EV + +  +      TT+D +   SD
Sbjct:  511 GYHAPEVLETRKVTFKSDVYSFGVLLLELLTGKSPNQASLGEEGI--DLPRWVLSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMACV-STVPDQRPVMQEVLRMIEDVNRSE--TTDDGLRQSSD 634          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.452e-11
Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 206
            +  K+SDFG +R +    THL+T V G FG   Y+ PEY  +   T K DVYSFG VL+EL+TGE+P
Sbjct:  571 YRAKVSDFGTSRSITIAQTHLTTLVAGTFG---YMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKP 634          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.452e-11
Identity = 46/140 (32.86%), Postives = 73/140 (52.14%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKG--VDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            PKI+DFG+ARL + ID     + N   G  GY+APEY      + K DVYSFG ++LE+++G++  N   + E   G+L+ +  +    G   + +DK L+       N + + + +   CV   +  ERP+M  V   L
Sbjct:  483 PKIADFGMARLFD-IDHTTQRYTNRIVGTFGYMAPEYVMHGQFSFKTDVYSFGVLVLEIISGKK--NSGFSSEDSMGDLISFAWRNWKEGVALNLVDKILMTMSSYSSNMIMRCINIGLLCVQEKV-AERPSMASVVLML 618          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 3.452e-11
Identity = 43/138 (31.16%), Postives = 72/138 (52.17%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            PKI DFG+AR      T  +T      G +GY+ PEY      + K DVYSFG ++LE++ G++ +++ +   +   NLV ++ +L +   L + +D  +      NE+ + + +   CV    P +RPTM  V+  L
Sbjct:  451 PKIVDFGVARNFRVDQTEATTA--RVVGTIGYMPPEYVTNGQFSTKSDVYSFGVLILEIIGGKKNSSINETDGSI-SNLVTYVWRLWNNEPLLELVDAPMGENYDRNEVIRCIHIGLLCVQEN-PADRPTMSTVFHML 584          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.452e-11
Identity = 42/138 (30.43%), Postives = 73/138 (52.90%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            PK++DFG+AR+     T  +T      G  GY+APEYA     + K DVYSFG ++ E+++G + +++ +  ++   NLV +  +L S G   D +D         +++ + + +A  CV   +  +RP M  + Q L
Sbjct:  647 PKVADFGMARIFGMDQTEANT--RRVVGTYGYMAPEYAMYGQFSMKSDVYSFGVLVFEIISGMKNSSLYQMDDSV-SNLVTYTWRLWSNGSQLDLVDPSFGDNYQTHDITRCIHIALLCVQEDV-DDRPNMSAIVQML 780          
The following BLAST results are available for this feature:
BLAST of CX296262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
CRK21_ARATH2.024e-1130.43Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
APK1A_ARATH2.024e-1140.41Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
WAKLK_ARATH2.643e-1130.18Putative wall-associated receptor kinase-like 11 O... [more]
THE1_ARATH2.643e-1136.57Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
BIK1_ARATH2.643e-1135.17Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y2267_ARATH3.452e-1134.11Probable inactive receptor kinase At2g26730 OS=Ara... [more]
WAKLF_ARATH3.452e-1150.75Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
CRK26_ARATH3.452e-1132.86Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK24_ARATH3.452e-1131.16Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
CRK23_ARATH3.452e-1130.43Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC05138A08SK FerrChloL1 Citrus clementina cDNA clone C05138A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296262 ID=CX296262; Name=CX296262; organism=Citrus clementina; type=EST; length=520bp
GAGGTTTTGAGCCCAAAATATCTGATTTCGGCCTTGCTAGGCTCATGAAC
CCAATTGATACTCATTTAAGTACCTTCGTGAATGGAGAGTTTGGGGATTT
GGGTTATGTTGCTCCGGAGTACGCAAGAACTCTTGTTGCCACACCGAAGG
GAGATGTTTACAGCTTTGGAACTGTGCTTCTTGAGTTGGTAACTGGTGAG
AGACCTACCAATGTGGCTAAAGCTCCTGAAACCTTTAAGGGAAATCTCGT
TGAATGGATTGCACAGCTGTCAAGTACCGGTCAACTTCAAGATGCTATTG
ATAAATGCTTGGTTGCGAAGGGCGTTGACAATGAGCTTTTTCAGTTCCTT
AAAGTTGCATGTAACTGTGTACTTCCAACCATCCCCAAGGAGAGGCCTAC
CATGTTTGAAGTATACCAGTTTCTAAGAGCTATTGGGGAGCGTTACCATT
TTACCACTGAAGACGAGATTATGCTGCCCTCAGACAGCGGTGATGCCGAT
ATTCTTGAAGAACTTATTGT
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