CX296262

Overview
NameCX296262
Unique NameCX296262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length520
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.357e-14
Identity = 50/144 (34.72%), Postives = 80/144 (55.56%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDN-ELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            FE ++SDFG+A+ +    T+ ST+V    G +GY+ PEYART     K D+YSFG VLLEL+TG++  +        + NL + I   +    + +A+D  +    +D+  + +  ++A  C     P ERPTM EV + L ++
Sbjct:  788 FEARLSDFGIAKSIPATKTYASTYV---LGTIGYIDPEYARTSRLNEKSDIYSFGIVLLELLTGKKAVD-------NEANLHQMILSKADDNTVMEAVDAEVSVTCMDSGHIKKTFQLALLCTKRN-PLERPTMQEVSRVLLSL 920          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.690e-14
Identity = 49/135 (36.30%), Postives = 79/135 (58.52%), Query Frame = 3
Query:   15 KISDFGLARLMNPID--THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            K++DFGL+R   PI+  TH+ST V G     GY+ PEY RT     K DVYSFG VLLE++T +   N ++     K ++ EW+  + + G +Q+ +D  L        +++ +++A +C+ P+  + RPTM +V
Sbjct:  732 KLADFGLSRSF-PIEGETHVSTVVAGT---PGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQSRE----KPHIAEWVGLMLTKGDIQNIMDPKLYGDYDSGSVWRAVELAMSCLNPSSAR-RPTMSQV 857          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.690e-14
Identity = 55/169 (32.54%), Postives = 84/169 (49.70%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDEIMLPSDSGDADILEELI 518
            PKI+DFGLA+L +   T    F +   G  GY+APEYA     + K DV+SFG +++E++TG+R  N     +    +L+ W+ +      +   ID  L A G  NE+ + + +   CV  +    RPTM  V   L +    Y FT      LP+    A +LE ++
Sbjct:  496 PKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKRNNNGGSNGDEDAEDLLSWVWRSWREDTILSVIDPSLTA-GSRNEILRCIHIGLLCVQES-AATRPTMATVSLMLNS----YSFT------LPTPLRPAFVLESVV 652          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.432e-14
Identity = 51/138 (36.96%), Postives = 72/138 (52.17%), Query Frame = 3
Query:    6 FEPKISDFGLARL--MNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            F  K+SDFGL+R+   +   TH+ST V G FG   Y+ PEY R  + T K DVYSFG VLLE++   RP  +   P   + +L+ W+    +   +   ID  L A      + +F ++A  CV      ERP M +V
Sbjct:  665 FVAKVSDFGLSRVGPTSASQTHVSTVVKGTFG---YLDPEYYRRQILTEKSDVYSFGVVLLEVLCC-RPIRMQSVPPE-QADLIRWVKSNFNKRTVDQIIDSDLTADITSTSMEKFCEIAIRCVQDR-GMERPPMNDV 796          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.432e-14
Identity = 60/170 (35.29%), Postives = 86/170 (50.59%), Query Frame = 3
Query:    3 GFEPKISDFGLARLMNPID-THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQL-SSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDEIMLPSDSGDADIL 506
            GF PK+SDFGLA+L    D +H+ST V G +G   Y APEYA T   T K DVYSFG V LEL+TG +  + ++ P   + NLV W   L +   +     D  L  +     L+Q L VA  C+       RP + +V   L  +  + +  ++D+     D   A ++
Sbjct:  224 GFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYG---YCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAID-SEMPHG-EQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQ-AATRPLIADVVTALSYLANQAYDPSKDDSRRNRDERGARLI 387          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.432e-14
Identity = 48/137 (35.04%), Postives = 75/137 (54.74%), Query Frame = 3
Query:   15 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            KI+DFG+AR+     T  +T      G  GY++PEYA     + K DVYSFG ++LE+++G++ +NV +   T  GNLV +  +L S G   + +D         NE+ + + +A  CV     ++RPTM  + Q L
Sbjct:  491 KIADFGMARIFGMDQTEANT--RRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGKKNSNVYQMDGTSAGNLVTYTWRLWSNGSPLELVDPSFRDNYRINEVSRCIHIALLCVQEE-AEDRPTMSAIVQML 624          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.706e-14
Identity = 53/135 (39.26%), Postives = 73/135 (54.07%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPID-THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQL-SSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTM 404
            ++PK+SDFGLA++    D TH+ST V G +G   Y AP+YA T   T K D+YSFG VLLEL+TG +  +  K  +    NLV W   L          +D  L  +     L+Q L ++  CV     +E+PTM
Sbjct:  242 YQPKLSDFGLAKVGPSGDKTHVSTRVMGTYG---YCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRK--DQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCV-----QEQPTM 366          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.706e-14
Identity = 48/141 (34.04%), Postives = 76/141 (53.90%), Query Frame = 3
Query:   15 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 437
            +++DFG+A+ ++ +       ++   G  GY+APEYA TL    K D+YSFG V+LE+VT +RP +    PE  + +LV+W+        ++  ID  L       E+ + L V   C  P +P  RP+M  V + L+ IG
Sbjct:  830 RVADFGVAKAVD-LTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVD----PELGEKDLVKWVCSTLDQKGIEHVIDPKL-DSCFKEEISKILNVGLLCTSP-LPINRPSMRRVVKMLQEIG 963          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.268e-13
Identity = 49/135 (36.30%), Postives = 77/135 (57.04%), Query Frame = 3
Query:   15 KISDFGLARLMNPID--THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            K++DFGL+R   P+D  +H+ST V G     GY+ PEY RT   + K DVYSFG VLLE+VT +  T+  +     + ++ EW+  + + G ++  +D  L+     N  ++ +++A  CV P+    RPTM  V
Sbjct:  705 KLADFGLSRSF-PVDGESHVSTVVAGT---PGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKTRE----RTHINEWVGSMLTKGDIKSILDPKLMGDYDTNGAWKIVELALACVNPS-SNRRPTMAHV 830          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.268e-13
Identity = 56/165 (33.94%), Postives = 87/165 (52.73%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDEIMLPSDSGDAD 500
            ++ K+SDFG +R +    THL+T V G FG   YV PEY ++   T K DVYSFG VL+EL+TG+ P++  ++ E  +G    ++A +    +  D +D+ +  +   +++    K+A  C L    K+RP M EV   L  I    +   + EI    D  D D
Sbjct:  561 YQVKVSDFGTSRSVTIDQTHLTTQVAGTFG---YVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNPSSRVQSEEN-RGFAAHFVAAVKE-NRFLDIVDERIKDECNLDQVMAVAKLAKRC-LNRKGKKRPNMREVSVELERIRSSSY---KSEIHNDDDDDDDD 716          
The following BLAST results are available for this feature:
BLAST of CX296262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
ERL2_ARATH4.357e-1434.72LRR receptor-like serine/threonine-protein kinase ... [more]
RLK6_ARATH5.690e-1436.30Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
CRK29_ARATH5.690e-1432.54Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
Y5389_ARATH7.432e-1436.96Probable receptor-like protein kinase At5g38990 OS... [more]
PBS1_ARATH7.432e-1435.29Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
CRK4_ARATH7.432e-1435.04Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
RLCK7_ARATH9.706e-1439.26Probable serine/threonine-protein kinase RLCKVII O... [more]
HSL1_ARATH9.706e-1434.04Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
Y5188_ARATH1.268e-1336.30Probable LRR receptor-like serine/threonine-protei... [more]
WAKLD_ARATH1.268e-1333.94Wall-associated receptor kinase-like 4 OS=Arabidop... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05138A08SK FerrChloL1 Citrus clementina cDNA clone C05138A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296262 ID=CX296262; Name=CX296262; organism=Citrus clementina; type=EST; length=520bp
GAGGTTTTGAGCCCAAAATATCTGATTTCGGCCTTGCTAGGCTCATGAAC
CCAATTGATACTCATTTAAGTACCTTCGTGAATGGAGAGTTTGGGGATTT
GGGTTATGTTGCTCCGGAGTACGCAAGAACTCTTGTTGCCACACCGAAGG
GAGATGTTTACAGCTTTGGAACTGTGCTTCTTGAGTTGGTAACTGGTGAG
AGACCTACCAATGTGGCTAAAGCTCCTGAAACCTTTAAGGGAAATCTCGT
TGAATGGATTGCACAGCTGTCAAGTACCGGTCAACTTCAAGATGCTATTG
ATAAATGCTTGGTTGCGAAGGGCGTTGACAATGAGCTTTTTCAGTTCCTT
AAAGTTGCATGTAACTGTGTACTTCCAACCATCCCCAAGGAGAGGCCTAC
CATGTTTGAAGTATACCAGTTTCTAAGAGCTATTGGGGAGCGTTACCATT
TTACCACTGAAGACGAGATTATGCTGCCCTCAGACAGCGGTGATGCCGAT
ATTCTTGAAGAACTTATTGT
back to top